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Lcy02g007710 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g007710
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description30S ribosomal protein S12, chloroplastic
Genome locationChr02:11151124..11151615
RNA-Seq ExpressionLcy02g007710
SyntenyLcy02g007710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7043485.1 unnamed protein product [Microthlaspi erraticum]1.0e-6399.22Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVL+LGSFHRLSRVEPWDLTAD
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

KAA0068048.1 hypothetical protein E6C27_scaffold138G002460 [Cucumis melo var. makuwa]8.6e-6398.45Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF ISTHFTAPP+IPSAPTVLQLGSFHRLSRVEPWDLTAD
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

KAG4944832.1 hypothetical protein JHK85_049478 [Glycine max]1.3e-6399.22Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTA+
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

KAG4976582.1 hypothetical protein JHK86_036056 [Glycine max]3.9e-6399.22Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTA+
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQ
        LKSHLQTLYAQSFRITLASSVLPRLLAQ
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQ

KYP48943.1 hypothetical protein KK1_029344, partial [Cajanus cajan]5.0e-6398.45Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIR APSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTA+
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

TrEMBL top hitse value%identityAlignment
A0A151S2A8 Uncharacterized protein (Fragment)2.4e-6398.45Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIR APSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTA+
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

A0A5A7VJP9 Uncharacterized protein4.2e-6398.45Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF ISTHFTAPP+IPSAPTVLQLGSFHRLSRVEPWDLTAD
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

A0A6D2K5V7 Uncharacterized protein4.9e-6499.22Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVL+LGSFHRLSRVEPWDLTAD
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQS
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

M1DBW2 30S ribosomal protein S12, chloroplastic3.8e-6499.22Show/hide
Query:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
        MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD
Subjt:  MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTAD

Query:  LKSHLQTLYAQSFRITLASSVLPRLLAQS
        LKSHLQTLYAQSFRITLASSVLPRLLAQ+
Subjt:  LKSHLQTLYAQSFRITLASSVLPRLLAQS

S8D511 Uncharacterized protein (Fragment)4.2e-6399.21Show/hide
Query:  SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLK
        SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLK
Subjt:  SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLK

Query:  SHLQTLYAQSFRITLASSVLPRLLAQS
        SHLQTLYAQSFRITLASSVLPRLLAQ+
Subjt:  SHLQTLYAQSFRITLASSVLPRLLAQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCCCTGGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTATCTAAT
CCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAA
TTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCC
CAATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCCCTGGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTATCTAAT
CCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAA
TTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCC
CAATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGTTAG
Protein sequenceShow/hide protein sequence
MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYA
QSFRITLASSVLPRLLAQS