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Lcy02g007730 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g007730
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr02:11153791..11154810
RNA-Seq ExpressionLcy02g007730
SyntenyLcy02g007730
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5336141.1 unnamed protein product [Arabidopsis thaliana]1.3e-5358.94Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                              
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------

Query:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR
                                            SIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRR
Subjt:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR

Query:  SGDSRIG
        SGDSRIG
Subjt:  SGDSRIG

CAD5336145.1 unnamed protein product [Arabidopsis thaliana]1.3e-5358.94Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                              
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------

Query:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR
                                            SIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRR
Subjt:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR

Query:  SGDSRIG
        SGDSRIG
Subjt:  SGDSRIG

KAD3640919.1 hypothetical protein E3N88_30142 [Mikania micrantha]5.2e-6670.1Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------
        MDRTWTVVGVGGS RVP SGIPGEEDQVGPCEQLDALSPFNPLSE+RQKEGKSMDRPH LHPVGTTR PQGRLR                          
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------

Query:  ----------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ
                              SIYDLSFMDVDKI PFSSTLGWHSLK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENK RSGDSRIG+
Subjt:  ----------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ

KAG7528872.1 hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica]7.0e-5561.31Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                              
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------

Query:  ---------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ
                                   SIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG+
Subjt:  ---------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]2.6e-7364.32Show/hide
Query:  VVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------------
        VVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                
Subjt:  VVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------------

Query:  -----------------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
                                                       SIYDLSFMDVDKIL FSSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SD
Subjt:  -----------------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        EMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf681.2e-7364.32Show/hide
Query:  VVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------------
        VVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                
Subjt:  VVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------------

Query:  -----------------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
                                                       SIYDLSFMDVDKIL FSSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SD
Subjt:  -----------------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        EMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

A0A5N6MLP8 Uncharacterized protein ycf682.5e-6670.1Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------
        MDRTWTVVGVGGS RVP SGIPGEEDQVGPCEQLDALSPFNPLSE+RQKEGKSMDRPH LHPVGTTR PQGRLR                          
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR--------------------------

Query:  ----------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ
                              SIYDLSFMDVDKI PFSSTLGWHSLK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENK RSGDSRIG+
Subjt:  ----------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ

A0A6N2L5J2 Uncharacterized protein ycf68 (Fragment)9.9e-5561.11Show/hide
Query:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHP----VG---------------------------------------
        VGVGGS RVPSSGIPGEEDQVGPCEQLDALS FNPL++   K  KSMDRPHRLHP    VG                                       
Subjt:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHP----VG---------------------------------------

Query:  -----TTRSPQGRLRSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR
             +  SP     SIYDLSFMDVDKILPFSSTLGWHSLKVKGE             P   +GVVSDEMLRGVENKRRSGDSRIGQPFKLL NPWAGKR
Subjt:  -----TTRSPQGRLRSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR

Query:  QPGELKHLSSQRKRKQ
        QPGELKHLS+QRKRKQ
Subjt:  QPGELKHLSSQRKRKQ

A0A7G2FKR6 Uncharacterized protein ycf686.4e-5458.94Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                              
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------

Query:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR
                                            SIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRR
Subjt:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR

Query:  SGDSRIG
        SGDSRIG
Subjt:  SGDSRIG

A0A7G2FMH4 Uncharacterized protein ycf686.4e-5458.94Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                                              
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR----------------------------------------------

Query:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR
                                            SIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRR
Subjt:  ------------------------------------SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRR

Query:  SGDSRIG
        SGDSRIG
Subjt:  SGDSRIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACT
ATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTC
GTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGC
TTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC
TTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACT
ATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTC
GTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGC
TTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC
TTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG
Protein sequenceShow/hide protein sequence
MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKG
LRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP