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Lcy02g008080 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g008080
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr02:11813996..11816898
RNA-Seq ExpressionLcy02g008080
SyntenyLcy02g008080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU17808.1 hypothetical protein TSUD_171970 [Trifolium subterraneum]1.6e-2531.85Show/hide
Query:  DLGFVGEKFTWCNRRPGSATIYERL---------VARVGNFTRGTRI-RRFEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGRSKV
        DLGF G  +TW N+  G   I  RL         ++    FT    + R+FE++W       + VR++W           L RK    +  L  WGR   
Subjt:  DLGFVGEKFTWCNRRPGSATIYERL---------VARVGNFTRGTRI-RRFEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGRSKV

Query:  GNYSERIR---MATYKEEFGMALSEVP----------------------SRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIG
        G   +RI+   +  Y  +      ++P                       R+D +M+  L + F+ EE+ +A+K +    AP PDGLL  FY+ +W I+G
Subjt:  GNYSERIR---MATYKEEFGMALSEVP----------------------SRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIG

Query:  SDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNV
         D+    L VLN  GSP+P N+T I LI K++KP   +++RPISLCNV
Subjt:  SDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNV

KAB2617422.1 hypothetical protein D8674_013291 [Pyrus ussuriensis x Pyrus communis]7.0e-2632.79Show/hide
Query:  DLGFVGEKFTWCNRRPGSATIY-ERLVAR------------------------------VGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPS
        D+GFVG KFTW   R G   +  +R +A                               V   T+  R  R+E+ W       D V+  W    AGS   
Subjt:  DLGFVGEKFTWCNRRPGSATIY-ERLVAR------------------------------VGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPS

Query:  CLAR--KASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSD
         +    KA+ CM+ + +        Y +++  +  K E  M L +V  +V   MN  LL PF+ EE+  AL Q+HP KAP PDG+   FY +HW I+G D
Subjt:  CLAR--KASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSD

Query:  VIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
        V  G   +L   G  R +N T + LI K + P  ++  RPISLCNV+
Subjt:  VIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]7.0e-2632.97Show/hide
Query:  GYDNCFSV---------DCSGHSVDLGFVGEKFTWCNRRPGSATIYERL-----------------VARVGNF-----------TRGTRI--------RR
        G D C ++         DCS   VDLG  G  FTW N+R G   I ERL                 V+ + ++              TR+        RR
Subjt:  GYDNCFSV---------DCSGHSVDLGFVGEKFTWCNRRPGSATIYERL-----------------VARVGNF-----------TRGTRI--------RR

Query:  F--EEVWLQFPELSDRVRESW---SVHAAGSRPSCLARKASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVV
        F  E++W  +      V++ W        G   +   + A+  M +L +W      + SE             AL+ V  +VD++MN  L  PF+ EEV 
Subjt:  F--EEVWLQFPELSDRVRESW---SVHAAGSRPSCLARKASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVV

Query:  LALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
         +L Q+ P KAP PDGL + F+ +HWS +   VI+ CL +LN  G+  PLN T I LI K  KP+ V+D+RPISLCNV+
Subjt:  LALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

XP_030939512.1 uncharacterized protein LOC115964316 [Quercus lobata]1.6e-2531.75Show/hide
Query:  DLGFVGEKFTWCNRRPGSATIYERL----------------------------------VARVGNFTRGTRIR-RFEEVWLQFPELSDRVRESWSVHAAG
        DLG+ G  +TW N+RPG A    RL                                  V  V  F +  + R +FEE WL + +    V+++W +   G
Subjt:  DLGFVGEKFTWCNRRPGSATIYERL----------------------------------VARVGNFTRGTRIR-RFEEVWLQFPELSDRVRESWSVHAAG

Query:  -SRPSCLARKASACMQELFIWGRSK----------------VGNYSERIRMATYKEEFGMA--------LSEVPSRVDAQMNQSLLQPFSFEEVVLALKQ
         S  + +  K   C +EL  WG SK                V N +E +   +  E   ++        L+ VP +V  +M+ +L   FS +EV +AL Q
Subjt:  -SRPSCLARKASACMQELFIWGRSK----------------VGNYSERIRMATYKEEFGMA--------LSEVPSRVDAQMNQSLLQPFSFEEVVLALKQ

Query:  IHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
        + P KAP PDG+ +LFY R W ++G  V+   LD LN       +N T IVLI KV  P  ++D+RPISLCNV+
Subjt:  IHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

XP_030942886.1 uncharacterized protein LOC115967872 [Quercus lobata]7.5e-2829.37Show/hide
Query:  DLGFVGEKFTWCNRRPGSATIYERL--------------VARVGNFTRGT-----------------RIRR--FEEVWLQFPELSDRVRESWSVHAAGSR
        DLG+VG  FTWCN + G+  +Y RL                RV +    T                 R RR  FE +W +  +  + ++ +W      + 
Subjt:  DLGFVGEKFTWCNRRPGSATIYERL--------------VARVGNFTRGT-----------------RIRR--FEEVWLQFPELSDRVRESWSVHAAGSR

Query:  PSCLARKASACMQELFIWGRSKVG---------------------------------------NYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQP
        P+ +A   SAC  +L +W  +  G                                       +Y E I   ++  +    ++ +PS V  +MN  L + 
Subjt:  PSCLARKASACMQELFIWGRSKVG---------------------------------------NYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQP

Query:  FSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
        F  EEVV+ALKQ+HP K+P PDG+ +LF+ +HWSI+G++V    L+VLN       +N+T I L+ K + P+ + D+RPISLCNV+
Subjt:  FSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

TrEMBL top hitse value%identityAlignment
A0A1R3J1H5 Reverse transcriptase2.9e-2531.66Show/hide
Query:  NCFSVDCSG-HSVDLGFVGEKFTWCNRRPGSATIYERLVARVGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGR
        +CF     G + +D+GF G+++ W  R     +    L+    +  +  R  +FE +WL+ P+  D V+  WSV   GS    L  K      EL  W +
Subjt:  NCFSVDCSG-HSVDLGFVGEKFTWCNRRPGSATIYERLVARVGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGR

Query:  SKVGN--------YSERIRMATYKEE--------------------------FGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLL
            N         +E + +   K E                           G  L  +P+ V   MNQSL +PF  EE+  A  Q+  HKAP PDG  
Subjt:  SKVGN--------YSERIRMATYKEE--------------------------FGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLL

Query:  SLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCN
         +F+   W I+G  V    L   NG    R LN T IVLI KV+ P  V  YRPISLCN
Subjt:  SLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCN

A0A2N9GBF2 Reverse transcriptase domain-containing protein5.2e-2732.57Show/hide
Query:  WCNRRPGSATIYERL------VARVGNFTRGTRIRRFEEVWLQFPELSDRVRESWS-VHAAGSRPSCLARKASACMQELFIWGRSKVGNYSERIRMATYK
        W NRR G A I +RL       A + +     R R+FEE W   PE    +++ WS   A GS    L  K   C + L+ W +   G +  +I+     
Subjt:  WCNRRPGSATIYERL------VARVGNFTRGTRIRRFEEVWLQFPELSDRVRESWS-VHAAGSRPSCLARKASACMQELFIWGRSKVGNYSERIRMATYK

Query:  EEFGM--------------------------------------------------ALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLL
          F                                                     L+ V SRV  ++NQ LLQPF+ +EV +AL Q+HP KAP PDG+ 
Subjt:  EEFGM--------------------------------------------------ALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLL

Query:  SLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
        S F+ ++W+I+G+DV+A  L VLN     R +N T I LI K   P  +++YRPISLCNV+
Subjt:  SLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

A0A2Z6MI35 Reverse transcriptase domain-containing protein7.6e-2631.85Show/hide
Query:  DLGFVGEKFTWCNRRPGSATIYERL---------VARVGNFTRGTRI-RRFEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGRSKV
        DLGF G  +TW N+  G   I  RL         ++    FT    + R+FE++W       + VR++W           L RK    +  L  WGR   
Subjt:  DLGFVGEKFTWCNRRPGSATIYERL---------VARVGNFTRGTRI-RRFEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGRSKV

Query:  GNYSERIR---MATYKEEFGMALSEVP----------------------SRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIG
        G   +RI+   +  Y  +      ++P                       R+D +M+  L + F+ EE+ +A+K +    AP PDGLL  FY+ +W I+G
Subjt:  GNYSERIR---MATYKEEFGMALSEVP----------------------SRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIG

Query:  SDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNV
         D+    L VLN  GSP+P N+T I LI K++KP   +++RPISLCNV
Subjt:  SDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNV

A0A5N5GUR9 Uncharacterized protein3.4e-2632.79Show/hide
Query:  DLGFVGEKFTWCNRRPGSATIY-ERLVAR------------------------------VGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPS
        D+GFVG KFTW   R G   +  +R +A                               V   T+  R  R+E+ W       D V+  W    AGS   
Subjt:  DLGFVGEKFTWCNRRPGSATIY-ERLVAR------------------------------VGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPS

Query:  CLAR--KASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSD
         +    KA+ CM+ + +        Y +++  +  K E  M L +V  +V   MN  LL PF+ EE+  AL Q+HP KAP PDG+   FY +HW I+G D
Subjt:  CLAR--KASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSD

Query:  VIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
        V  G   +L   G  R +N T + LI K + P  ++  RPISLCNV+
Subjt:  VIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

A0A803QJV0 Uncharacterized protein5.2e-2733.93Show/hide
Query:  GGRMDIVKQQLGYDNCFSVD-CSGHSVDLGFVGEKFTWCNRRPGSATIYERLVARVGNF----------------------------------TRGTRIR
        G  M+  K+ L  D C  +D CS        V  +FTWCN    S+ + ERL   + N                                     G RI+
Subjt:  GGRMDIVKQQLGYDNCFSVD-CSGHSVDLGFVGEKFTWCNRRPGSATIYERLVARVGNF----------------------------------TRGTRIR

Query:  R-----FEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEV
        R     FEEVW    E    + + W         +    K     + L +W R K    +  I     KE     L  V  +V   MN++LLQPF  EEV
Subjt:  R-----FEEVWLQFPELSDRVRESWSVHAAGSRPSCLARKASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEV

Query:  VLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM
        V A+K++HP KAP  DGL +LFY   WS +  DV+   L++L+G      LNET+I LI KV KP +VA+YRPISLCNV+
Subjt:  VLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDVLNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTTCTGAAACTAAATCCTGTGGTGGACGAATGGATATTGTGAAACAACAATTGGGATATGATAACTGTTTTAGTGTGGATTGTTCTGGTCATAGTGTG
GATTTGGGCTTTGTGGGTGAAAAGTTCACCTGGTGTAATCGTCGCCCGGGGTCTGCCACAATTTATGAACGCTTGGTGGCTCGGGTGGGAAATTTTACACGGGGT
ACTCGTATCAGAAGGTTTGAGGAAGTTTGGCTTCAATTCCCTGAACTTTCTGATCGGGTGCGGGAGTCATGGTCTGTTCATGCTGCTGGTTCTCGTCCTTCTTGT
TTAGCCAGGAAGGCTTCAGCTTGTATGCAAGAGTTGTTTATATGGGGAAGGTCGAAAGTGGGTAACTACTCCGAGCGAATTCGTATGGCCACATATAAGGAGGAA
TTTGGGATGGCCCTTTCTGAGGTTCCAAGTCGAGTGGATGCCCAAATGAACCAGAGTTTATTGCAACCATTTTCTTTTGAAGAGGTAGTCCTGGCTCTTAAGCAA
ATTCATCCTCACAAAGCGCCCGACCCTGATGGTCTTCTTAGTTTGTTTTACAACCGTCACTGGTCGATTATTGGTTCGGATGTCATCGCCGGCTGTTTAGATGTT
CTAAATGGGGAAGGTTCTCCTCGACCCTTAAATGAGACAATGATTGTCCTTATTGCGAAAGTCTCGAAGCCTCGATCTGTGGCTGACTACCGTCCAATCTCTCTC
TGTAATGTAATGGTTGCTCGATTCCGATCTATGGGTCGAATTGGCTACCTCGTGATCATGAGTTCAAAGTGCAATCTGCTCCCTCTTTGCCAGTTGAATCTAAGG
TTAGTTGTCTTATCACAACTTCGGGAGGTTGGGATTATGAGGTTATCCGCAATAATTTCAATCCTTCTGAGCAACAACTTATCTTGCATATTCCTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTTCTGAAACTAAATCCTGTGGTGGACGAATGGATATTGTGAAACAACAATTGGGATATGATAACTGTTTTAGTGTGGATTGTTCTGGTCATAGTGTG
GATTTGGGCTTTGTGGGTGAAAAGTTCACCTGGTGTAATCGTCGCCCGGGGTCTGCCACAATTTATGAACGCTTGGTGGCTCGGGTGGGAAATTTTACACGGGGT
ACTCGTATCAGAAGGTTTGAGGAAGTTTGGCTTCAATTCCCTGAACTTTCTGATCGGGTGCGGGAGTCATGGTCTGTTCATGCTGCTGGTTCTCGTCCTTCTTGT
TTAGCCAGGAAGGCTTCAGCTTGTATGCAAGAGTTGTTTATATGGGGAAGGTCGAAAGTGGGTAACTACTCCGAGCGAATTCGTATGGCCACATATAAGGAGGAA
TTTGGGATGGCCCTTTCTGAGGTTCCAAGTCGAGTGGATGCCCAAATGAACCAGAGTTTATTGCAACCATTTTCTTTTGAAGAGGTAGTCCTGGCTCTTAAGCAA
ATTCATCCTCACAAAGCGCCCGACCCTGATGGTCTTCTTAGTTTGTTTTACAACCGTCACTGGTCGATTATTGGTTCGGATGTCATCGCCGGCTGTTTAGATGTT
CTAAATGGGGAAGGTTCTCCTCGACCCTTAAATGAGACAATGATTGTCCTTATTGCGAAAGTCTCGAAGCCTCGATCTGTGGCTGACTACCGTCCAATCTCTCTC
TGTAATGTAATGGTTGCTCGATTCCGATCTATGGGTCGAATTGGCTACCTCGTGATCATGAGTTCAAAGTGCAATCTGCTCCCTCTTTGCCAGTTGAATCTAAGG
TTAGTTGTCTTATCACAACTTCGGGAGGTTGGGATTATGAGGTTATCCGCAATAATTTCAATCCTTCTGAGCAACAACTTATCTTGCATATTCCTTTGCTGA
Protein sequenceShow/hide protein sequence
MFISETKSCGGRMDIVKQQLGYDNCFSVDCSGHSVDLGFVGEKFTWCNRRPGSATIYERLVARVGNFTRGTRIRRFEEVWLQFPELSDRVRESWSVHAAGSRPSC
LARKASACMQELFIWGRSKVGNYSERIRMATYKEEFGMALSEVPSRVDAQMNQSLLQPFSFEEVVLALKQIHPHKAPDPDGLLSLFYNRHWSIIGSDVIAGCLDV
LNGEGSPRPLNETMIVLIAKVSKPRSVADYRPISLCNVMVARFRSMGRIGYLVIMSSKCNLLPLCQLNLRLVVLSQLREVGIMRLSAIISILLSNNLSCIFLC