; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy02g008100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g008100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr02:11817414..11818199
RNA-Seq ExpressionLcy02g008100
SyntenyLcy02g008100
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382410.1 uncharacterized protein LOC107175497 [Citrus sinensis]4.5e-3438.8Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M+ +W  +K  RIE +G N+F+FKF   A+K RVM GGPW FD AL+VL  P+G  D     F+   F V+  N+P+ ++   M +  G  +G+V D+  
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLR
          +   IG + ++R+ +++ KPLR+ + +  ED+     PI YERLPDFCF CG IGH +++C+        D+  PYG W++
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.0e-4641.31Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M S+W VH   R E +G N+++  F+S++EK RV++ GPWTF+++LLVL SP   + P+ M+F+ CAF +   N+P + ++  MA   G+ +G V ++ G
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVN
         G + W G  ++VRV I+++KPLRRGI+L+  D    WCP++YE+LPDFC++CG+IGH  R+C         +    YGDWLR    + S    ++    
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVN

Query:  EFQERGGRRGCGH
        E   RGGR G GH
Subjt:  EFQERGGRRGCGH

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.6e-3441.98Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M  +W +H   RIE  G N+++  F+++AEKIRV + GPWTFD++LL+LV     + P+ +D S CAF V    +  + +T  MA+  G+ +G V +V G
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRD
            +W+   + VRV I + KPLRRG++++  D    WCP++YERLPDFC+ CG +GH  R+
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRD

XP_024037025.1 uncharacterized protein LOC112096996 [Citrus clementina]7.6e-3438.8Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M+ +W  +K  RIE +G N+F+FKF   A+K RVM GGPW FD AL+VL  P+G  D     F+   F V+  N+P+ ++   M +  G  +G+V D+  
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLR
          +   IG + ++R+ +++ KPLR+ + +  ED+     PI YERLPDFCF CG IGH +++C+        D+  PYG W++
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLR

XP_024955847.1 uncharacterized protein LOC112498636 [Citrus sinensis]1.0e-3338.25Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M+ +W  +K  RIE +G N+F+FKF   A+K RVM GGPW FD AL+VL  P+G  D     F+   F V+  N+P+ ++   M +  G  +G+V ++  
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLR
          +   IG + ++R+ +++ KPLR+ + +  ED+     PI YERLPDFCF CG IGH +++C+        D+  PYG W++
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLR

TrEMBL top hitse value%identityAlignment
A0A2N9GWE9 Uncharacterized protein1.4e-3334.62Show/hide
Query:  MISLW-NVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVY
        M+ LW  V +G    ++GEN+F+F+FR   E+ RVM G PW FD +LL+L    G+     + FS C F V F  VPL Y+T       GS  G V +V 
Subjt:  MISLW-NVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVY

Query:  GAGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMG--FPYGDWLRVDFFRLSRGPVMTR
         +      G+ ++VR+C+++ KP+ RG  +        W   +YERLP  CF CG IGHL RDCV  G  N++  G    YG WLR      S  P   R
Subjt:  GAGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMG--FPYGDWLRVDFFRLSRGPVMTR

Query:  GVNEFQERGGRRGC--GHGRFAGVS---SVNRECEFEDVFDPGDDGALVNCLAPTAIVSP
        G++  +    R G     G  +G +    +NR+ +F++       G + N  A    ++P
Subjt:  GVNEFQERGGRRGC--GHGRFAGVS---SVNRECEFEDVFDPGDDGALVNCLAPTAIVSP

A0A314YVX1 CCHC-type domain-containing protein3.5e-3232.24Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M+ +WN  +   ++ +GEN+F+F F +  ++++V+  GPW FD+AL++L  P G   P  M      F +   NVPL  +T  M R  G+++G  +DV  
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVN
              +G  +++RVC++++KPL RG +L L   +  +   +YERLP+FCF CGR+GH+ ++C             PYG WL+            T+ +N
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVN

Query:  EFQERGGRRGCGHG
          +    +R  G G
Subjt:  EFQERGGRRGCGHG

A0A5C7GUN1 Uncharacterized protein2.6e-3241.21Show/hide
Query:  LWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQ
        +W V  G  IE +  N++ F F+S  ++ RV  GGPW+FD AL+VL  P+G     ++ F+   F V+  NVP+ Y+T  + +  GS +G V +V     
Subjt:  LWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQ

Query:  EEWIGSVMQVRVCIELNKPLRRGIRLR-LEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGH-GNNADMGFPYGDWLR
         + +G  M+VRV +E++KPLRR +R+  L D   +  PIQYERLP FCF CG +GHL  +C   G  G     G  YG WLR
Subjt:  EEWIGSVMQVRVCIELNKPLRRGIRLR-LEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGH-GNNADMGFPYGDWLR

A0A6J1D765 uncharacterized protein LOC1110179021.4e-4641.31Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M S+W VH   R E +G N+++  F+S++EK RV++ GPWTF+++LLVL SP   + P+ M+F+ CAF +   N+P + ++  MA   G+ +G V ++ G
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVN
         G + W G  ++VRV I+++KPLRRGI+L+  D    WCP++YE+LPDFC++CG+IGH  R+C         +    YGDWLR    + S    ++    
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVN

Query:  EFQERGGRRGCGH
        E   RGGR G GH
Subjt:  EFQERGGRRGCGH

A0A6J1DVS4 uncharacterized protein LOC1110235551.3e-3441.98Show/hide
Query:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG
        M  +W +H   RIE  G N+++  F+++AEKIRV + GPWTFD++LL+LV     + P+ +D S CAF V    +  + +T  MA+  G+ +G V +V G
Subjt:  MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYG

Query:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRD
            +W+   + VRV I + KPLRRG++++  D    WCP++YERLPDFC+ CG +GH  R+
Subjt:  AGQEEWIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding9.4e-0622.37Show/hide
Query:  FKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELNKP
        F F+S      ++  GPW+F+  + V+   +        +F +  F +    +PL++LT  +  + G  +G  ++    G++                  
Subjt:  FKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEEWIGSVMQVRVCIELNKP

Query:  LRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGH-GNNAD
                     VS    QYE+L +FC  CG + H   +C  SG+ G +AD
Subjt:  LRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGH-GNNAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCATTATGGAATGTTCATAAGGGTAATCGAATTGAGCATGTGGGAGAAAATGTTTTCATCTTCAAATTTCGGTCAGTGGCTGAGAAAATTAGAGTAATG
AATGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCCCAGGGGAATGATGATCCAGTGGCAATGGATTTCTCAAAATGTGCTTTCCGGGTT
AATTTTTGCAATGTACCTTTGAAATATCTTACATGTGTTATGGCTAGGAATTTTGGGAGTGCTGTGGGTACTGTTGTAGATGTGTATGGTGCAGGACAGGAGGAG
TGGATAGGATCTGTTATGCAGGTTCGTGTTTGTATTGAACTTAATAAACCATTGAGGCGTGGTATTCGACTTCGACTTGAGGATGATTCGGTTAGTTGGTGTCCG
ATTCAATACGAACGTTTGCCCGATTTTTGTTTTCAGTGTGGTAGGATTGGGCATCTGCATCGTGACTGTGTGGTCAGTGGGCATGGGAACAATGCAGACATGGGT
TTTCCTTATGGTGATTGGCTTCGGGTTGATTTTTTTCGACTGTCTCGGGGACCTGTGATGACCAGGGGAGTTAATGAATTCCAAGAAAGAGGAGGTCGTCGTGGG
TGTGGCCATGGACGGTTTGCTGGGGTTTCATCTGTTAATCGTGAATGTGAGTTTGAGGATGTGTTTGATCCTGGGGATGATGGAGCACTGGTAAACTGTTTGGCC
CCGACTGCGATTGTATCACCACCAAATGGTCCTGCAGTGGGTGAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTCATTATGGAATGTTCATAAGGGTAATCGAATTGAGCATGTGGGAGAAAATGTTTTCATCTTCAAATTTCGGTCAGTGGCTGAGAAAATTAGAGTAATG
AATGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCCCAGGGGAATGATGATCCAGTGGCAATGGATTTCTCAAAATGTGCTTTCCGGGTT
AATTTTTGCAATGTACCTTTGAAATATCTTACATGTGTTATGGCTAGGAATTTTGGGAGTGCTGTGGGTACTGTTGTAGATGTGTATGGTGCAGGACAGGAGGAG
TGGATAGGATCTGTTATGCAGGTTCGTGTTTGTATTGAACTTAATAAACCATTGAGGCGTGGTATTCGACTTCGACTTGAGGATGATTCGGTTAGTTGGTGTCCG
ATTCAATACGAACGTTTGCCCGATTTTTGTTTTCAGTGTGGTAGGATTGGGCATCTGCATCGTGACTGTGTGGTCAGTGGGCATGGGAACAATGCAGACATGGGT
TTTCCTTATGGTGATTGGCTTCGGGTTGATTTTTTTCGACTGTCTCGGGGACCTGTGATGACCAGGGGAGTTAATGAATTCCAAGAAAGAGGAGGTCGTCGTGGG
TGTGGCCATGGACGGTTTGCTGGGGTTTCATCTGTTAATCGTGAATGTGAGTTTGAGGATGTGTTTGATCCTGGGGATGATGGAGCACTGGTAAACTGTTTGGCC
CCGACTGCGATTGTATCACCACCAAATGGTCCTGCAGTGGGTGAGAGTTAG
Protein sequenceShow/hide protein sequence
MISLWNVHKGNRIEHVGENVFIFKFRSVAEKIRVMNGGPWTFDRALLVLVSPQGNDDPVAMDFSKCAFRVNFCNVPLKYLTCVMARNFGSAVGTVVDVYGAGQEE
WIGSVMQVRVCIELNKPLRRGIRLRLEDDSVSWCPIQYERLPDFCFQCGRIGHLHRDCVVSGHGNNADMGFPYGDWLRVDFFRLSRGPVMTRGVNEFQERGGRRG
CGHGRFAGVSSVNRECEFEDVFDPGDDGALVNCLAPTAIVSPPNGPAVGES