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Lcy02g009190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g009190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein TIC 20
Genome locationChr02:17568019..17568252
RNA-Seq ExpressionLcy02g009190
SyntenyLcy02g009190
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022987499.1 protein TIC 20-II, chloroplastic-like [Cucurbita maxima]7.0e-2072.73Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAS SIPL NLSTK  IKAALIP +S ++SRH  SLPLLPS+PAK   + MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

XP_023005732.1 protein TIC 20-II, chloroplastic-like isoform X1 [Cucurbita maxima]2.4e-2075.32Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAST IPL NL T T IKA LIP  S L+SRHRSSLPLL SKPAK + V MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

XP_023005745.1 protein TIC 20-II, chloroplastic-like isoform X2 [Cucurbita maxima]2.4e-2075.32Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAST IPL NL T T IKA LIP  S L+SRHRSSLPLL SKPAK + V MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

XP_023516082.1 protein TIC 20-II, chloroplastic-like [Cucurbita pepo subsp. pepo]3.2e-2074.03Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAS SIPL NLSTK  IKAALIP +S ++SRH  SLPLLPSKPAK   + MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

XP_038879337.1 protein TIC 20-II, chloroplastic [Benincasa hispida]3.2e-2072.73Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAS+SIPL NLS KT  +AALIP  S ++SRHRSSLP LPSKPAK  V  MSYNPT   DR+ISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXS7 Protein TIC 204.9e-1970.13Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MASTSIPL NLS KT+I+AAL P  S ++SRH SSLP LPSK  K   + MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

A0A6J1HBN6 Protein TIC 207.6e-2072.73Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAS SIPL NLS K  IKAALIP +S ++SRH  SLPLLPSKPAK   + MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

A0A6J1JJ22 Protein TIC 203.4e-2072.73Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAS SIPL NLSTK  IKAALIP +S ++SRH  SLPLLPS+PAK   + MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

A0A6J1KY86 Protein TIC 201.2e-2075.32Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAST IPL NL T T IKA LIP  S L+SRHRSSLPLL SKPAK + V MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

A0A6J1KY91 Protein TIC 201.2e-2075.32Show/hide
Query:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        MAST IPL NL T T IKA LIP  S L+SRHRSSLPLL SKPAK + V MSYNPT   DRLISA+AYTLPFFNSLQ
Subjt:  MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47840.1 Uncharacterised conserved protein ycf609.8e-0451.35Show/hide
Query:  SKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ
        S+ A  L    SY PT   +R+IS  +Y LPFFNSLQ
Subjt:  SKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCCATCCCTCTCTTCAACCTCTCCACCAAAACCACTATTAAAGCTGCTCTAATCCCTCGCTTCTCTACCCTCAGATCTCGCCACCGTTCCTCTCTCCC
CCTTCTCCCCTCAAAACCCGCAAAATGCCTCGTCGTTCACATGTCTTATAACCCTACCCTGACCGCTGACCGCCTCATCTCCGCCCTCGCCTACACTCTCCCTTTCTTCA
ACTCCCTCCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACTTCCATCCCTCTCTTCAACCTCTCCACCAAAACCACTATTAAAGCTGCTCTAATCCCTCGCTTCTCTACCCTCAGATCTCGCCACCGTTCCTCTCTCCC
CCTTCTCCCCTCAAAACCCGCAAAATGCCTCGTCGTTCACATGTCTTATAACCCTACCCTGACCGCTGACCGCCTCATCTCCGCCCTCGCCTACACTCTCCCTTTCTTCA
ACTCCCTCCAGTAA
Protein sequenceShow/hide protein sequence
MASTSIPLFNLSTKTTIKAALIPRFSTLRSRHRSSLPLLPSKPAKCLVVHMSYNPTLTADRLISALAYTLPFFNSLQ