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Lcy02g010360 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g010360
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationChr02:28137638..28138057
RNA-Seq ExpressionLcy02g010360
SyntenyLcy02g010360
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW42723.1 hypothetical protein CK203_098617 [Vitis vinifera]1.5e-4467.16Show/hide
Query:  GPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSD
        GPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ LLP ++
Subjt:  GPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSD

Query:  ERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        E + +    E + S+H REME +R++IA LL+SH
Subjt:  ERNELSVTEESETSYHGREMEAEREKIAKLLMSH

RVW72148.1 hypothetical protein CK203_061803 [Vitis vinifera]1.2e-4667.88Show/hide
Query:  GYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLP
        GYLGPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ LLP
Subjt:  GYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLP

Query:  SSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
         ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  SSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

RVW90111.1 hypothetical protein CK203_035860 [Vitis vinifera]3.2e-4767.63Show/hide
Query:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL
        M GYLGPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ L
Subjt:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL

Query:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        LP ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

RVX08681.1 Protein ALP1-like [Vitis vinifera]1.6e-4666.91Show/hide
Query:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL
        M GYLGPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+A M LHNFIR +   D EFKPYDDD+ L
Subjt:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL

Query:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        LP ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

RVX11459.1 L10-interacting MYB domain-containing protein [Vitis vinifera]2.7e-4666.91Show/hide
Query:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL
        M GYLG YK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ L
Subjt:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL

Query:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        LP ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

TrEMBL top hitse value%identityAlignment
A0A438E4X2 DDE Tnp4 domain-containing protein7.2e-4567.16Show/hide
Query:  GPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSD
        GPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ LLP ++
Subjt:  GPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSD

Query:  ERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        E + +    E + S+H REME +R++IA LL+SH
Subjt:  ERNELSVTEESETSYHGREMEAEREKIAKLLMSH

A0A438GIV5 DDE Tnp4 domain-containing protein5.9e-4767.88Show/hide
Query:  GYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLP
        GYLGPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ LLP
Subjt:  GYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLP

Query:  SSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
         ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  SSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

A0A438I069 DDE Tnp4 domain-containing protein1.5e-4767.63Show/hide
Query:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL
        M GYLGPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ L
Subjt:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL

Query:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        LP ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

A0A438JIA2 Protein ALP1-like7.7e-4766.91Show/hide
Query:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL
        M GYLGPYK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+A M LHNFIR +   D EFKPYDDD+ L
Subjt:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL

Query:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        LP ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

A0A438JR82 L10-interacting MYB domain-containing protein1.3e-4666.91Show/hide
Query:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL
        M GYLG YK ERYHLPDFR GS P GKKEIFNHRHSSL CTIERTF V KNRWRM+R+MH FP EKQ+KIV+ASM LHNFIR +   D EFKPYDDD+ L
Subjt:  MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDL

Query:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH
        LP ++E + +    E + S+H REME +R++IA LL+SH
Subjt:  LPSSDERNELSVTEESETSYHGREMEAEREKIAKLLMSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein5.3e-0844.64Show/hide
Query:  KGYLGPYKDE-----RYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNR
        +G L PY+       RYH+  F  G +P  K E+FN  H+SL   IERTF +WKN+
Subjt:  KGYLGPYKDE-----RYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNR

AT4G10890.1 unknown protein4.4e-1048.15Show/hide
Query:  GYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMV
        GYLGP++   YHL  F  G  P   +E+FN +H  L   I+RTFGVWK +WR++
Subjt:  GYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMV

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.8e-0928.47Show/hide
Query:  YLGPYKDERYHLPDFRCGSQ-PTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLP
        +L P++  RYHL +F    + P    E+FN RH SL   IER FG++K+R+ + +    F ++KQ  +V+    LHNF+R    +D    P +   +   
Subjt:  YLGPYKDERYHLPDFRCGSQ-PTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLP

Query:  SSDERNELSVTE-ESETSYHGREMEAEREKIAKLLMS
         ++E N ++  E ++E     ++ + E   + +  M+
Subjt:  SSDERNELSVTE-ESETSYHGREMEAEREKIAKLLMS

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.7e-1032.23Show/hide
Query:  KEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSDERNELSVTEE------SETSYH
        KE+FN RH  L   I RTFG  K R+ ++     +P + Q+K+V+A+  LHN++R     D  F+ +  +E+ L  + E  E+++ EE       E  + 
Subjt:  KEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSDERNELSVTEE------SETSYH

Query:  GREMEAE---REKIAKLLMSH
          E+E     R++IA  L +H
Subjt:  GREMEAE---REKIAKLLMSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGTATCTAGGTCCTTATAAAGACGAAAGATATCATCTTCCTGATTTTCGTTGTGGGAGTCAACCAACAGGTAAGAAGGAAATATTTAACCATAGGCAT
TCATCTTTATGGTGTACAATTGAGAGGACATTTGGTGTTTGGAAGAATAGATGGCGAATGGTACGTCAAATGCATCGATTTCCTTTTGAAAAACAAATAAAAATT
GTTGTTGCATCAATGACACTTCATAATTTTATAAGAACTCATTATGCAACTGACTTTGAGTTCAAGCCTTACGATGACGATGAAGATTTGCTCCCTTCAAGTGAT
GAAAGAAACGAGTTGAGTGTTACTGAAGAAAGTGAAACTTCTTATCATGGAAGGGAGATGGAAGCAGAGCGGGAGAAAATTGCAAAACTTCTTATGTCACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGTATCTAGGTCCTTATAAAGACGAAAGATATCATCTTCCTGATTTTCGTTGTGGGAGTCAACCAACAGGTAAGAAGGAAATATTTAACCATAGGCAT
TCATCTTTATGGTGTACAATTGAGAGGACATTTGGTGTTTGGAAGAATAGATGGCGAATGGTACGTCAAATGCATCGATTTCCTTTTGAAAAACAAATAAAAATT
GTTGTTGCATCAATGACACTTCATAATTTTATAAGAACTCATTATGCAACTGACTTTGAGTTCAAGCCTTACGATGACGATGAAGATTTGCTCCCTTCAAGTGAT
GAAAGAAACGAGTTGAGTGTTACTGAAGAAAGTGAAACTTCTTATCATGGAAGGGAGATGGAAGCAGAGCGGGAGAAAATTGCAAAACTTCTTATGTCACATTGA
Protein sequenceShow/hide protein sequence
MKGYLGPYKDERYHLPDFRCGSQPTGKKEIFNHRHSSLWCTIERTFGVWKNRWRMVRQMHRFPFEKQIKIVVASMTLHNFIRTHYATDFEFKPYDDDEDLLPSSD
ERNELSVTEESETSYHGREMEAEREKIAKLLMSH