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Lcy02g010880 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g010880
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr02:32761557..32762171
RNA-Seq ExpressionLcy02g010880
SyntenyLcy02g010880
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]3.9e-7063.11Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D+I EHD I+ P + +N  LY G+IC+NKE++QH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y + W+GK+K+ ++
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSDLG
            LG
Subjt:  VFSDLG

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]1.5e-7265.69Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D I EHD I+ P + +N  LY G+IC+NK++LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y R W+GK+K++AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-7265.69Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D I EHD I+ P + +N  LY G+IC+NK++LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y R W+GK+K++AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.7e-7366.18Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        M+  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D I EHD I+ P + +N  LY G+IC+NKE+LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y R W+GK+KA+AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

XP_008456454.1 PREDICTED: uncharacterized protein LOC103496397 [Cucumis melo]1.1e-7265.69Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RT+TDDEFE++ FD  E+ VPS TFT L+MD  D I EHD I+ P +++N  LY G+IC+NKE+LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK   GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+  EF E VREKPSISV  LQS I+ KFGY+V Y R W+GK+KA+AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

TrEMBL top hitse value%identityAlignment
A0A1S3C4J7 uncharacterized protein LOC1034963975.4e-7365.69Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RT+TDDEFE++ FD  E+ VPS TFT L+MD  D I EHD I+ P +++N  LY G+IC+NKE+LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK   GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+  EF E VREKPSISV  LQS I+ KFGY+V Y R W+GK+KA+AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

A0A5A7SS31 DBD_Tnp_Mut domain-containing protein1.9e-7063.11Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D+I EHD I+ P + +N  LY G+IC+NKE++QH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y + W+GK+K+ ++
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSDLG
            LG
Subjt:  VFSDLG

A0A5A7T1X8 SWIM-type domain-containing protein7.0e-7365.69Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D I EHD I+ P + +N  LY G+IC+NK++LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y R W+GK+K++AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.0e-7365.69Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        MV  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D I EHD I+ P + +N  LY G+IC+NK++LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y R W+GK+K++AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.3e-7466.18Show/hide
Query:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW
        M+  N + + RTETDDEFE++ FD  E+ VPS TFT L+M+  D I EHD I+ P + +N  LY G+IC+NKE+LQH+VKCFA+K HAPYEVVESTP KW
Subjt:  MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMD--DSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKW

Query:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK
         +RCKK  +GCKW+LRAI KKSHGLFEIT+  DQH CFYSEL+QSH QLDSSM+A EF E VREKPSISV  LQS I+ KFGYHV Y R W+GK+KA+AK
Subjt:  AVRCKKWEDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAK

Query:  VFSD
        VF D
Subjt:  VFSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTAGATAATACTTTTAAAGACCTAAGGACCGAGACAGATGATGAATTTGAAGATTTGGGTTTCGATGATCGTGAGCATACTGTCCCTTCAGAAACATTC
ACTTACTTGGAGATGGATGATAGCATTACAGAACATGATCATATTGTAGCCCCAACAATCGTTGAAAATTACTTATTATATAAGGGGCTAATATGTCAAAACAAG
GAAATTCTTCAACACTTGGTAAAATGTTTTGCAGTTAAGTGTCACGCACCGTATGAAGTTGTTGAGTCAACACCAGCAAAATGGGCAGTACGATGTAAGAAGTGG
GAAGATGGTTGCAAATGGCAACTTCGTGCCATTAAAAAAAAATCGCATGGACTCTTTGAGATCACTCAGTATGTTGATCAACATGTCTGTTTTTATTCAGAACTA
AACCAGAGTCATGCACAACTAGATTCTTCGATGATTGCGTTGGAATTCTGTGAACCAGTGAGAGAGAAACCTTCGATCAGTGTGTTAAAACTACAATCTGAAATA
AGATCTAAGTTTGGGTATCATGTTCCTTACCATAGAGTGTGGGAAGGAAAAAGAAAAGCTTTAGCCAAAGTCTTTAGCGATTTGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTAGATAATACTTTTAAAGACCTAAGGACCGAGACAGATGATGAATTTGAAGATTTGGGTTTCGATGATCGTGAGCATACTGTCCCTTCAGAAACATTC
ACTTACTTGGAGATGGATGATAGCATTACAGAACATGATCATATTGTAGCCCCAACAATCGTTGAAAATTACTTATTATATAAGGGGCTAATATGTCAAAACAAG
GAAATTCTTCAACACTTGGTAAAATGTTTTGCAGTTAAGTGTCACGCACCGTATGAAGTTGTTGAGTCAACACCAGCAAAATGGGCAGTACGATGTAAGAAGTGG
GAAGATGGTTGCAAATGGCAACTTCGTGCCATTAAAAAAAAATCGCATGGACTCTTTGAGATCACTCAGTATGTTGATCAACATGTCTGTTTTTATTCAGAACTA
AACCAGAGTCATGCACAACTAGATTCTTCGATGATTGCGTTGGAATTCTGTGAACCAGTGAGAGAGAAACCTTCGATCAGTGTGTTAAAACTACAATCTGAAATA
AGATCTAAGTTTGGGTATCATGTTCCTTACCATAGAGTGTGGGAAGGAAAAAGAAAAGCTTTAGCCAAAGTCTTTAGCGATTTGGGATGA
Protein sequenceShow/hide protein sequence
MVVDNTFKDLRTETDDEFEDLGFDDREHTVPSETFTYLEMDDSITEHDHIVAPTIVENYLLYKGLICQNKEILQHLVKCFAVKCHAPYEVVESTPAKWAVRCKKW
EDGCKWQLRAIKKKSHGLFEITQYVDQHVCFYSELNQSHAQLDSSMIALEFCEPVREKPSISVLKLQSEIRSKFGYHVPYHRVWEGKRKALAKVFSDLG