; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy02g010930 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g010930
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H
Genome locationChr02:32963465..32964793
RNA-Seq ExpressionLcy02g010930
SyntenyLcy02g010930
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNY07715.1 ribonuclease H [Trifolium pratense]8.2e-2730.96Show/hide
Query:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK
        K G +TVKS Y+  ++   ++S+Q A  SNNH  +P W K WNIK  PK    +WR + N++P  +N+  KGI  + +C  C K  E+++H+F  C+++ 
Subjt:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK

Query:  FAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE
          W    PL   + + N    T  +  ++M  N   E ++  + + +S+W  RN+ +  N+D P  + + RA+  NI + +  ++      +C  P+ S+
Subjt:  FAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE

Query:  --SLSSH-ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI
          S++ H  SW PPP    KLNVDA  S+     GLGW+LR   G  +    K +  S  + M E   + E L  ++++ +
Subjt:  --SLSSH-ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI

XP_023915006.1 uncharacterized protein LOC112026546 [Quercus suber]1.8e-2631.09Show/hide
Query:  KKGAFTVKSAYHLAVQI-DSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFA
        KKG+FTVKSAY++A  I DSN+    S+++    +W++ W+ K  PK KI  WR   N LPT  N++ +G++ +  C  C K  E+  H    C  +K  
Subjt:  KKGAFTVKSAYHLAVQI-DSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFA

Query:  WRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLS
        W       +G   L+ G     D    + +N  +  LE    V WS+W  RNQ++          +       + E K+  S +   L          +S
Subjt:  WRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLS

Query:  SHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL
        S  +W PPPAG  K+NVD + S+  + S  G I+RDS GS I    + ++S +   + E  A+ +G+
Subjt:  SHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL

XP_030495196.1 uncharacterized protein LOC115710989 [Cannabis sativa]1.2e-2527.37Show/hide
Query:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK
        G +TV+S YHLA  +     ++ S++ +    W+ FW+++   K KI  WR I ++LP  +++  + + T+  C  CR+  ESV H+F+GC ++K  WR 
Subjt:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK

Query:  IIPLMD--GLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDP--------DFKYLTRAVNANIKEEKKRVSANLFSLSCLNP
        +    D     S+ +G     D+ +++  +    + E+    LW +W++RNQ + S +            +YL     A +K      S+ +        
Subjt:  IIPLMD--GLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDP--------DFKYLTRAVNANIKEEKKRVSANLFSLSCLNP

Query:  SGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL
          S S +  A W+PPP G  KLN+DA+  + S   G+G ++R+  G  I      I  +++   +E KA+  G+
Subjt:  SGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL

XP_030943489.1 uncharacterized protein LOC115968280 [Quercus lobata]1.4e-2629.09Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKAAP-SNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFA
        KKG FTVKSAY++A+ +++       S+     P+W++ W++K   K +I  WR   N LPT  N+  +GI  + +C  C K  ES+ H    C+F+K  
Subjt:  KKGAFTVKSAYHLAVQIDSNQKAAP-SNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFA

Query:  WRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLS
        W       +   +++  QW   D    + E     DLE   ++ WS+W  RNQ +  +               +++ K   S+          SG +   
Subjt:  WRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLS

Query:  SHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI
           SW PPPAGV+K+NVD + SE  + S +G I+RDS G  +      ++  +S    E  A+  G+   Q   +
Subjt:  SHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI

XP_030958321.1 uncharacterized protein LOC115980180 [Quercus lobata]2.3e-2930.37Show/hide
Query:  MEKKKGAFTVKSAYHLAVQI-DSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFS
        M   +G FT+KSAYH+A  + D       S      P+W++ W++    K KI  WR   N LP+   +  +GI T+  C  C K  ES+ H    C F+
Subjt:  MEKKKGAFTVKSAYHLAVQI-DSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFS

Query:  KFAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE
           W   +   DG+  L R  WT  D   +   +  +  LE    ++W++W  RN++I  +       + +    +IK+       NL       PS   
Subjt:  KFAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE

Query:  SLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL
        +LSS   W PPP GV+K+NVD + SE+  TS +G I+RD  G  +    K + S +  +++E+ A+ +G+
Subjt:  SLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL

TrEMBL top hitse value%identityAlignment
A0A2K3NXF2 Ribonuclease H3.9e-2730.96Show/hide
Query:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK
        K G +TVKS Y+  ++   ++S+Q A  SNNH  +P W K WNIK  PK    +WR + N++P  +N+  KGI  + +C  C K  E+++H+F  C+++ 
Subjt:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK

Query:  FAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE
          W    PL   + + N    T  +  ++M  N   E ++  + + +S+W  RN+ +  N+D P  + + RA+  NI + +  ++      +C  P+ S+
Subjt:  FAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE

Query:  --SLSSH-ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI
          S++ H  SW PPP    KLNVDA  S+     GLGW+LR   G  +    K +  S  + M E   + E L  ++++ +
Subjt:  --SLSSH-ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI

A0A2N9GQR6 Uncharacterized protein1.1e-2628.89Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW
        K+G F+VKSAY L V   ++Q A+ S++     +W   W ++  PK K+ +W+  QN +PT + +  KGI     C WC    E+ +H+ WGC+F++  W
Subjt:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW

Query:  RKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTR---AVNANIKEEKKRVSANLFSLSCLNPSGSES
            P+  G+   +   +T  D       +L T  +E A    W+LW  RN+++   + P    + +   A+ ++  E K +V              +  
Subjt:  RKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTR---AVNANIKEEKKRVSANLFSLSCLNPSGSES

Query:  LSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLK
        L     W+ PPA VWKLN+    S +S   GLG ++RDS G+ +      +  +  +  +  KA+L  LK
Subjt:  LSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLK

A0A803P623 Uncharacterized protein5.7e-2627.37Show/hide
Query:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK
        G +TV+S YHLA  +     ++ S++ +    W+ FW+++   K KI  WR I ++LP  +++  + + T+  C  CR+  ESV H+F+GC ++K  WR 
Subjt:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK

Query:  IIPLMD--GLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDP--------DFKYLTRAVNANIKEEKKRVSANLFSLSCLNP
        +    D     S+ +G     D+ +++  +    + E+    LW +W++RNQ + S +            +YL     A +K      S+ +        
Subjt:  IIPLMD--GLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDP--------DFKYLTRAVNANIKEEKKRVSANLFSLSCLNP

Query:  SGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL
          S S +  A W+PPP G  KLN+DA+  + S   G+G ++R+  G  I      I  +++   +E KA+  G+
Subjt:  SGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL

A0A803PZC5 Uncharacterized protein2.2e-2527.92Show/hide
Query:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK
        G + V S YH A  ++     +PS +      W+ FW+++   K KI VWR +  +LP  +++  + I T+  C  CR   ES+ H  +GCK++K  WR 
Subjt:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK

Query:  IIPLMDGLFSLNRG-QWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSH
             +  F  N+  Q    D    +       ++E    +LW +W++RN+ +   Q     +L    N  +   +         L  + PS + +   H
Subjt:  IIPLMDGLFSLNRG-QWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSH

Query:  ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL
          W+PPP G  K+NVDA+        GLG ++R+STG  I      I  +++   +E KAI   L
Subjt:  ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL

A0A803Q6Y1 Uncharacterized protein6.3e-2526.28Show/hide
Query:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK
        G +TV++ YHLA  ++       S ++++ P W+ FW ++   K KI  WR   ++LP  + +  + + T+  C  CR+  E+V H  +GCK++K  WR 
Subjt:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK

Query:  IIPLMD--GLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSS
             D     S+ +G     D+   +       ++E+   +LWS+W +RN+ +  ++    + L+      +     R + + +      P  +    +
Subjt:  IIPLMD--GLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSS

Query:  HAS--------WEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL
        H S        W+PPP  ++KLN+DA+    + T+GLG I+RDSTG  +    K++  S+    +E  A+  G+
Subjt:  HAS--------WEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-0722.6Show/hide
Query:  WRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTE
        ++  W    IPK     W N+++ L T   +   G    P+C +C  H E+ +H+F+ C+F++  W      +     L        D  RW++     +
Subjt:  WRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTE

Query:  DLEKATLV-------LWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSHASW
        D    T++       ++++W +RN  +  +        +R   A I E K  +  +L  LS     G   +S  A+W
Subjt:  DLEKATLV-------LWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSHASW

AT2G02650.1 Ribonuclease H-like superfamily protein4.8e-1723.94Show/hide
Query:  VKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPL
        ++S Y +A   D  ++ A         + +  W +   PK K  +WR +  +L T + +  + I  +PIC  C    E++ HI + C +++  WR    +
Subjt:  VKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPL

Query:  MDGLFSLNRGQWTARDHWRWMEENLGTEDLEK--ATLVLWSLWNQRNQSI--QSNQDPDFKY------LTRAVNANIKEEKKRVSANLFSLSCLNPSGSE
        +   +          +    + +   T  L++     ++W LW  RN  +  Q  Q PD++        T  +NAN   E   V          NP  + 
Subjt:  MDGLFSLNRGQWTARDHWRWMEENLGTEDLEK--ATLVLWSLWNQRNQSI--QSNQDPDFKY------LTRAVNANIKEEKKRVSANLFSLSCLNPSGSE

Query:  SLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGS-PICGGLKRINSSWSI
           S + W PPP G  K N D+  ++ S  +  GW +R+  G   +CG  K  +S+ S+
Subjt:  SLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGS-PICGGLKRINSSWSI

AT3G09510.1 Ribonuclease H-like superfamily protein1.3e-1926.07Show/hide
Query:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK
        G +TV+S Y L     S    A +  H    +  + WN+  +PK K  +WR +  +L T   +  +G+  +P C  C +  ES+ H  + C F+  AWR 
Subjt:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK

Query:  IIPLMDGLFSLNRGQWTARDHWRWMEENLGT----------EDLEKATLV--LWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVS--ANLFSLS
           L D   SL R Q  + D     EEN+             D  K   V  +W +W  RN  +       F     + +  +   K       N     
Subjt:  IIPLMDGLFSLNRGQWTARDHWRWMEENLGT----------EDLEKATLV--LWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVS--ANLFSLS

Query:  CLNPSGSESLSSH-ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLK
           PS +  ++ +   W  PPA   K N DA        +  GWI+R+  G+PI  G  ++  + +    E KA+L  L+
Subjt:  CLNPSGSESLSSH-ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.6e-0733.9Show/hide
Query:  WNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK
        W++K  PK K+ +W+ + N+LP G+ +  + I   P C  CR   E++ HI + C F++
Subjt:  WNIKAIPKAKICVWRNIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.5e-0624.41Show/hide
Query:  VLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPI
        ++W +W   N  + ++    F+        + KE       N       N + +   S +  W PP     K N DAS  E +  SGLGWILR+S G+ I
Subjt:  VLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPI

Query:  CGGLKRINSSWSIKMLEMKAILEGLKS
          G+ +     + +  E   ++  +++
Subjt:  CGGLKRINSSWSIKMLEMKAILEGLKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCAAAGAAAATTTTACAGCTATTGATGCATCAACAATCCTCAATTCAATCTCAGGGGGCCCAAATCAGAAGGACGAAATCATATGTAATGGAGAAAAAA
AAAGGAGCCTTTACGGTCAAAAGTGCATACCATCTCGCAGTCCAAATTGACTCAAATCAAAAGGCAGCCCCGTCTAACAATCATGCCCATGACCCTATGTGGAGG
AAATTCTGGAATATAAAGGCTATTCCCAAAGCCAAGATTTGTGTGTGGCGCAACATTCAGAACTCACTCCCTACGGGCTCAAACATTAATCTCAAGGGCATTTAC
ACTAACCCAATTTGTTTTTGGTGCAGGAAACACACGGAATCAGTGGAGCATATCTTTTGGGGTTGTAAGTTCTCTAAATTCGCTTGGAGAAAAATTATCCCCCTA
ATGGATGGCTTGTTTTCGTTAAACAGGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGACCTTA
GTTCTATGGAGTTTATGGAACCAGAGAAACCAATCAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAG
AAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGTGTG
TGGAAGCTTAACGTGGATGCTTCTCGGTCGGAAATGTCCCAAACGAGCGGTCTCGGGTGGATTTTGCGTGACTCTACAGGATCTCCAATCTGTGGAGGATTGAAG
AGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGA
mRNA sequenceShow/hide mRNA sequence
CTTACATATGTATTATTGCAGTCAATTCTTCATGAAGGGAAGTATTAAGCTGTGTCTCTCTATTACTGTTGAACATTTATTTTCTTTTAGCTCATTTTGTCTTTT
GTGTAACAGAATATTCGCAGCTTGCTTTGCAAGTTGGGACTGAATTTTGCTGATTTTTTAAGTGCAATTGAATTGGAACCAATCCCTCCCTAACCTGGTGCAGTA
TTCTTTGGGGAAGAGATTTGTTTAAAAAAGGATATAGATGGAGGATAGGGAACGGGCAGCAGGTGACCATAGACCAAGATCCGTGGCTCCCCTCCAATGGGGCAA
TAACTCCTATTCTCACAAAAGATATCCTAAAAGGCAGGAAAGTCCAGGACATTATGGACTCCCAAGGAGCATGGAAGGAAGATGTTATCAAAGAAAATTTTACAG
CTATTGATGCATCAACAATCCTCAATTCAATCTCAGGGGGCCCAAATCAGAAGGACGAAATCATATGTAATGGAGAAAAAAAAAGGAGCCTTTACGGTCAAAAGT
GCATACCATCTCGCAGTCCAAATTGACTCAAATCAAAAGGCAGCCCCGTCTAACAATCATGCCCATGACCCTATGTGGAGGAAATTCTGGAATATAAAGGCTATT
CCCAAAGCCAAGATTTGTGTGTGGCGCAACATTCAGAACTCACTCCCTACGGGCTCAAACATTAATCTCAAGGGCATTTACACTAACCCAATTTGTTTTTGGTGC
AGGAAACACACGGAATCAGTGGAGCATATCTTTTGGGGTTGTAAGTTCTCTAAATTCGCTTGGAGAAAAATTATCCCCCTAATGGATGGCTTGTTTTCGTTAAAC
AGGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGACCTTAGTTCTATGGAGTTTATGGAACCAG
AGAAACCAATCAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAGAAAAAGAGAGTTTCCGCTAACCTG
TTCAGCCTTTCGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGTGTGTGGAAGCTTAACGTGGATGCTTCT
CGGTCGGAAATGTCCCAAACGAGCGGTCTCGGGTGGATTTTGCGTGACTCTACAGGATCTCCAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATC
AAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGAAATTCC
Protein sequenceShow/hide protein sequence
MLSKKILQLLMHQQSSIQSQGAQIRRTKSYVMEKKKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRNIQNSLPTGSNINLKGIY
TNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPLMDGLFSLNRGQWTARDHWRWMEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEE
KKRVSANLFSLSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI