CuGenDBv2

Gene ID	Lcy02g017700
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tetratricopeptide repeat protein 4 homolog
Genome location	Chr02:44892880..44895213
RNA-Seq Expression	Lcy02g017700
Synteny	Lcy02g017700
Gene Ontology terms	GO:0051879 - Hsp90 protein binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008447360.1 PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis melo]

2.4e-57

85.04

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MF+E CPPLPWDAENKYTR+AVELYYE GSGICLSKE+I+R  LEGTAASNA+SI LDEKDAVEDS   TSANKGSSKWIKV+E+RTLH+VLKEPNY+IP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFY+VSRNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

XP_011651622.1 tetratricopeptide repeat protein 4 homolog [Cucumis sativus]

1.7e-55

84.25

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Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MF+E CPPLPWDAENKYTR+A+ELYYE GSGICLSKE+I+R  LEGTAASNAESI L+  DAVEDS   TSANKGSSKWIKV+E+RTLHDVLKEPNY+IP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVVSRNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

XP_022159855.1 tetratricopeptide repeat protein 4 homolog isoform X1 [Momordica charantia]

1.4e-54

85.04

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Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWD ENKYTR+AVELYYEVGSGICLSK  IIR LLEGTAASNAE++ LDEKDA+E S   TSAN+GSSKWIKVNEKRTLHDVLK PN LIP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

XP_022159856.1 tetratricopeptide repeat protein 4 homolog isoform X2 [Momordica charantia]

1.4e-54

85.04

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWD ENKYTR+AVELYYEVGSGICLSK  IIR LLEGTAASNAE++ LDEKDA+E S   TSAN+GSSKWIKVNEKRTLHDVLK PN LIP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

XP_022967280.1 tetratricopeptide repeat protein 4 homolog [Cucurbita maxima]

7.2e-54

83.46

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Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWDAENKYTR+AVELYYE GSGICLSKEKI+R LLEGTAASN ESI LDEKD VEDS  +TSA+  SSKWIKV+EK TLHDVLK+PN++IP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVVSRNSKFYK+FKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHV4 tetratricopeptide repeat protein 4 homolog

1.2e-57

85.04

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MF+E CPPLPWDAENKYTR+AVELYYE GSGICLSKE+I+R  LEGTAASNA+SI LDEKDAVEDS   TSANKGSSKWIKV+E+RTLH+VLKEPNY+IP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFY+VSRNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

A0A6J1DZY6 tetratricopeptide repeat protein 4 homolog isoform X1

7.0e-55

85.04

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWD ENKYTR+AVELYYEVGSGICLSK  IIR LLEGTAASNAE++ LDEKDA+E S   TSAN+GSSKWIKVNEKRTLHDVLK PN LIP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

A0A6J1E576 tetratricopeptide repeat protein 4 homolog isoform X2

7.0e-55

85.04

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWD ENKYTR+AVELYYEVGSGICLSK  IIR LLEGTAASNAE++ LDEKDA+E S   TSAN+GSSKWIKVNEKRTLHDVLK PN LIP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

A0A6J1HFS8 tetratricopeptide repeat protein 4 homolog

5.9e-54

82.68

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWDAENKYTR+AVELYYE GSGICLSKEKI+R LLEGTAASN ESI LDEKD VEDS  +TSA+  SSKWIKV+EK TLHDVLK+PN+++P
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVVSRNSKFYK+FKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

A0A6J1HU00 tetratricopeptide repeat protein 4 homolog

3.5e-54

83.46

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE CPPLPWDAENKYTR+AVELYYE GSGICLSKEKI+R LLEGTAASN ESI LDEKD VEDS  +TSA+  SSKWIKV+EK TLHDVLK+PN++IP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
        GIPVFYVVSRNSKFYK+FKAGRW PPS
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

SwissProt top hits

e value

%identity

Alignment

Q54M20 Tetratricopeptide repeat protein 4 homolog

2.8e-08

30.91

Show/hide

Query:  PWDAENKYTRDAVELYYEVG-SGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIPGIPVFYVV
        PWD + +YT D +E+Y+E   +   LS  KI  I                                   KWI+V     +  V+  P Y+IP IP+FY+V
Subjt:  PWDAENKYTRDAVELYYEVG-SGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIPGIPVFYVV

Query:  SRNSKFYKDF
        SR + FYK F
Subjt:  SRNSKFYKDF

Arabidopsis top hits

e value

%identity

Alignment

AT1G04130.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.7e-37

55.91

Show/hide

Query:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP
        MFSE  PPLPWD  N+Y+RD +ELYYE  SG  L + ++++ LLEGT  S AE+   ++  A +      S  KGSS  +KVNE+RTLHDVLKEP ++IP
Subjt:  MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIP

Query:  GIPVFYVVSRNSKFYKDFKAGRWAPPS
         IPVFY+VS+ SKFYKDF AG+W PP+
Subjt:  GIPVFYVVSRNSKFYKDFKAGRWAPPS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTTTCAGAAAGTTGTCCACCTTTGCCATGGGATGCAGAGAACAAATATACCCGTGACGCAGTTGAACTATACTATGAGGTTGGTTCAGGAATTTGTTTATCTAAAGA
AAAAATTATACGGATTCTTCTAGAGGGAACTGCTGCTTCTAATGCAGAGAGCATTGAACTTGATGAGAAAGATGCAGTCGAAGATTCAAAACCTGTCACTTCTGCAAATA
AAGGCTCTTCTAAATGGATCAAAGTTAATGAAAAGAGAACGCTCCACGACGTTCTAAAGGAGCCTAACTACCTTATACCAGGAATACCAGTCTTTTATGTTGTTTCAAGG
AACTCAAAATTTTACAAAGATTTCAAAGCTGGGAGATGGGCTCCTCCTTCATGA

mRNA sequence

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Protein sequence

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MFSESCPPLPWDAENKYTRDAVELYYEVGSGICLSKEKIIRILLEGTAASNAESIELDEKDAVEDSKPVTSANKGSSKWIKVNEKRTLHDVLKEPNYLIPGIPVFYVVSR
NSKFYKDFKAGRWAPPS

Lcy02g017700 (gene) of Sponge gourd (P93075) v1 genome