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Lcy03g003230 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy03g003230
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPlant transposase
Genome locationChr03:12686439..12687817
RNA-Seq ExpressionLcy03g003230
SyntenyLcy03g003230
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036985.1 uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]1.2e-5965.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

KAA0038958.1 uncharacterized protein E6C27_scaffold84G00340 [Cucumis melo var. makuwa]1.2e-5965.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

TYK07512.1 uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa]1.2e-5965.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

TYK08453.1 uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa]1.2e-5965.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

TYK17902.1 uncharacterized protein E5676_scaffold306G001840 [Cucumis melo var. makuwa]1.2e-5965.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

TrEMBL top hitse value%identityAlignment
A0A5A7T672 Uncharacterized protein5.9e-6065.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

A0A5A7T7V4 Uncharacterized protein5.9e-6065.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

A0A5D3C984 Uncharacterized protein5.9e-6065.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

A0A5D3D211 Uncharacterized protein5.9e-6065.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

A0A5D3DCM2 Uncharacterized protein5.9e-6065.48Show/hide
Query:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK
        MGRLWRA KSRLV +I  APTKD +LKLM DNLQS+DDWMDFV+EKTSA F LKSE+YKAM KKQL HTCSRKGYARLAEEM+KS SDP+ +TR+ LWTK
Subjt:  MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAM-KKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTK

Query:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV
        A K K+G+PVNSQVAETLERIEQT+ ET  S  NVV+DALSKVLG DRGHVRGFGFG                 VL + YL  + E+ + + +K+ +
Subjt:  ARK-KNGEPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFG-----------------VLVQNYLFFRNEITKSQCLKENV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGATTATGGAGGGCTAGAAAATCTCGTCTTGTAAGCAAGATTCACAAGGCCCCAACAAAGGATGAAGTTTTGAAACTTATGTCAGATAATTTACAATCT
ATAGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAATTTTATGTTAAAAAGTGAAAGATATAAAGCCATGAAGAAACAACTTACACATACATGTAGT
AGGAAAGGGTATGCTCGCTTGGCTGAAGAGATGAAAAAAAGTTGCTCGGATCCAAATTCAATCACGAGGATTAAGTTATGGACAAAGGCACGCAAAAAGAATGGA
GAACCAGTGAATTCACAAGTTGCTGAGACACTTGAACGTATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACGTGGTTGAGGATGCATTGAGTAAA
GTTCTTGGTCTTGATCGTGGGCATGTAAGGGGATTTGGATTTGGTGTGCTCGTACAAAATTATCTCTTCTTTCGCAACGAGATAACAAAGTCACAATGCTTGAAA
GAGAATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGATTATGGAGGGCTAGAAAATCTCGTCTTGTAAGCAAGATTCACAAGGCCCCAACAAAGGATGAAGTTTTGAAACTTATGTCAGATAATTTACAATCT
ATAGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAATTTTATGTTAAAAAGTGAAAGATATAAAGCCATGAAGAAACAACTTACACATACATGTAGT
AGGAAAGGGTATGCTCGCTTGGCTGAAGAGATGAAAAAAAGTTGCTCGGATCCAAATTCAATCACGAGGATTAAGTTATGGACAAAGGCACGCAAAAAGAATGGA
GAACCAGTGAATTCACAAGTTGCTGAGACACTTGAACGTATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACGTGGTTGAGGATGCATTGAGTAAA
GTTCTTGGTCTTGATCGTGGGCATGTAAGGGGATTTGGATTTGGTGTGCTCGTACAAAATTATCTCTTCTTTCGCAACGAGATAACAAAGTCACAATGCTTGAAA
GAGAATGTTTAA
Protein sequenceShow/hide protein sequence
MGRLWRARKSRLVSKIHKAPTKDEVLKLMSDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKQLTHTCSRKGYARLAEEMKKSCSDPNSITRIKLWTKARKKNG
EPVNSQVAETLERIEQTDVETITSPNNVVEDALSKVLGLDRGHVRGFGFGVLVQNYLFFRNEITKSQCLKENV