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Lcy03g005690 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy03g005690
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr03:31177766..31178221
RNA-Seq ExpressionLcy03g005690
SyntenyLcy03g005690
Gene Ontology termsGO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF0920597.1 hypothetical protein E2562_035741 [Oryza meyeriana var. granulata]2.6e-0948.39Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEE
        +RI+  +D+ +PL RG M++    E NCW   +YE LP+FC+ YG +GHV KEC+GK  KE+
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEE

KAF7151487.1 hypothetical protein RHSIM_Rhsim02G0110700 [Rhododendron simsii]7.6e-0951.61Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEE
        +R+R+ +DIT+PL+RGF L+  G EE+ WV  RYERL DFC+  G VGH   EC  K+  +E
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEE

KAG5544352.1 hypothetical protein RHGRI_016938 [Rhododendron griersonianum]1.3e-0854.24Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNS
        MR+RI +DI++PL++GF L+    E++ WV  RYERL DFC+  G VGHVA EC  K S
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNS

OMO54212.1 Endonuclease/exonuclease/phosphatase [Corchorus olitorius]1.3e-0850Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDGGSG
        +R++++++I  PL+ GF LK  G  E  WV+ +YERLPDFCF  G +GHVAKEC  K+ ++ GD G G
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDGGSG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.9e-0938.2Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDG-------------GSGKGDEKGKE
        +RIR+ +DIT+PLRRG  +  +G    CW+ I+YERLPDFC+F G +GH + +C+ +    + D              GS  G +KG++
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDG-------------GSGKGDEKGKE

TrEMBL top hitse value%identityAlignment
A0A1R3G7Z9 Endonuclease/exonuclease/phosphatase6.3e-0950Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDGGSG
        +R++++++I  PL+ GF LK  G  E  WV+ +YERLPDFCF  G +GHVAKEC  K+ ++ GD G G
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDGGSG

A0A2N9EP20 zf-CCHC_4 domain-containing protein6.3e-0956.14Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEEN--CWVTIRYERLPDFCFFYGYVGHVAKECN
        MR+RIRL++T PL RG M+K   +EEN  CWV  RYERLP+FC++ GY+ H  K+C+
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEEN--CWVTIRYERLPDFCFFYGYVGHVAKECN

A0A2N9IQ83 Uncharacterized protein6.3e-0956.14Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEEN--CWVTIRYERLPDFCFFYGYVGHVAKECN
        MR+RIRL++T PL RG M+K   +EEN  CWV  RYERLP+FC++ GY+ H  K+C+
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEEN--CWVTIRYERLPDFCFFYGYVGHVAKECN

A0A6G1E7A7 Uncharacterized protein1.3e-0948.39Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEE
        +RI+  +D+ +PL RG M++    E NCW   +YE LP+FC+ YG +GHV KEC+GK  KE+
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEE

A0A6J1DU55 uncharacterized protein LOC1110231354.8e-0938.2Show/hide
Query:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDG-------------GSGKGDEKGKE
        +RIR+ +DIT+PLRRG  +  +G    CW+ I+YERLPDFC+F G +GH + +C+ +    + D              GS  G +KG++
Subjt:  MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDG-------------GSGKGDEKGKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATTAGAATAAGATTGGACATAACAAGACCGTTAAGAAGAGGCTTTATGTTGAAAGCAAATGGTATAGAGGAGAATTGTTGGGTGACAATAAGATATGAAAGACT
TCCCGACTTTTGCTTTTTCTATGGTTATGTGGGTCACGTGGCCAAAGAATGCAATGGCAAGAACAGTAAGGAGGAAGGGGATGGAGGTTCTGGAAAAGGGGATGAAAAAG
GAAAGGAGATTGCAGTGGAGGATGGGAATGTAGGGAATGGACAGGAAGATTCTGTTAGATCGAATACTTTGGCCCTTGACGCGAGATTGCAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGATTAGAATAAGATTGGACATAACAAGACCGTTAAGAAGAGGCTTTATGTTGAAAGCAAATGGTATAGAGGAGAATTGTTGGGTGACAATAAGATATGAAAGACT
TCCCGACTTTTGCTTTTTCTATGGTTATGTGGGTCACGTGGCCAAAGAATGCAATGGCAAGAACAGTAAGGAGGAAGGGGATGGAGGTTCTGGAAAAGGGGATGAAAAAG
GAAAGGAGATTGCAGTGGAGGATGGGAATGTAGGGAATGGACAGGAAGATTCTGTTAGATCGAATACTTTGGCCCTTGACGCGAGATTGCAGACTTAG
Protein sequenceShow/hide protein sequence
MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDGGSGKGDEKGKEIAVEDGNVGNGQEDSVRSNTLALDARLQT