; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy03g007190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy03g007190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase
Genome locationChr03:36756703..36758286
RNA-Seq ExpressionLcy03g007190
SyntenyLcy03g007190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS61425.1 hypothetical protein M569_13371 [Genlisea aurea]7.3e-2740.22Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESL-KNKKVCTL
        +LAK  WRIL  P SLL ++L+GKY+R+ +F+  SLG + S TWRS+L  R+L   G RW  GDG  I I   PW+  +G   PI+    L    +V  L
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESL-KNKKVCTL

Query:  IN-GNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYWE-WMTRHSK----AEQIDRFIIILWCLW
        IN G   W   +I+  FLP+DA  I++IPLG G+  D +IW   K G       Y   W T H +    A   D F      LW
Subjt:  IN-GNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYWE-WMTRHSK----AEQIDRFIIILWCLW

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.8e-2637.67Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        ++AK  WR++R P SL+ R+++ +Y+++  F    +G+N S  WRSILWG  +  KG RW++GDG+ + + +D WI    +  PI          V  LI
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGE
        +   KW+ D ++ +F+  D E I+ I L  GK +DE++W  DKKGE
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGE

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]6.2e-2628.75Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        ++AK SWRI++ P SLL R+++ KYFR   F++  +G+N S  WRSILWGR++  KG RW++ DG+ + + Q  W+    +  PI       +  V  LI
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDY-----WEWMTRHSKAEQIDRFIIILWCLWSHKNNLNQQHSQIKNKQL
        + +  W++D I+ +F   DA  I+ IPL +  S D+++W  DKKG       Y      ++  R S +++       +W L   + N  ++ SQ+     
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDY-----WEWMTRHSKAEQIDRFIIILWCLWSHKNNLNQQHSQIKNKQL

Query:  IHKLENNSIFSHINRSIQEMERFVTSRLDILRRENFASHKEPFASLKSPSENVLKLNTDAACL--NRDLPKQLFI-ESDASVVVDAINGVSEDWSKMRNV
                  +     +Q  +R    +L  +  +N AS +        P     K+N DAA    N+ +   + I  S+  ++  AI       SK  + 
Subjt:  IHKLENNSIFSHINRSIQEMERFVTSRLDILRRENFASHKEPFASLKSPSENVLKLNTDAACL--NRDLPKQLFI-ESDASVVVDAINGVSEDWSKMRNV

Query:  IDVIVAEASKIGL
        +D   AEA++ GL
Subjt:  IDVIVAEASKIGL

XP_022145149.1 uncharacterized protein LOC111014663 [Momordica charantia]1.0e-2850.78Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        MLAK SWRILR+P S L + LRGKYFR G+F+K  LGN+ S  WRSILW R+LF KGY+W+VG+G  I+I  D WI+      P++T  S+    V  L+
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPL
           G+W E  I+ NF+  +AE I+ IPL
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPL

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]5.6e-3550.34Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        MLAK SWRILR+P SLL + LRGKYF+ G+F++  LG   S  WRSILWGRDLF KGYRWKVG+G  I +  DPW+   G+ SP++T   ++N  V  L+
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKG
         G G+W E  ++ +F+  +A+ I+  PL      DEIIW +DK G
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKG

TrEMBL top hitse value%identityAlignment
A0A6J1CUD6 uncharacterized protein LOC1110146635.0e-2950.78Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        MLAK SWRILR+P S L + LRGKYFR G+F+K  LGN+ S  WRSILW R+LF KGY+W+VG+G  I+I  D WI+      P++T  S+    V  L+
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPL
           G+W E  I+ NF+  +AE I+ IPL
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPL

A0A6J1DRA0 uncharacterized protein LOC1110224232.7e-3550.34Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        MLAK SWRILR+P SLL + LRGKYF+ G+F++  LG   S  WRSILWGRDLF KGYRWKVG+G  I +  DPW+   G+ SP++T   ++N  V  L+
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKG
         G G+W E  ++ +F+  +A+ I+  PL      DEIIW +DK G
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKG

A0A803P5U5 Uncharacterized protein1.8e-2632.98Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        +LAK +WR++ NP SLL ++L+ KYF   +F++ S+G++ S+TW+ I WGR+L  +G RWK+ +GR I    DPWI+   + +PI  S   +N  V  LI
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGE-----GKSPKDYWEWMTRHSKAEQIDRFIIILWCLWSHKNNL
            +W   +++  F PLD E I+ +PL    ++D++IW     G+          DY + ++      ++++    LW +W+ +N +
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGE-----GKSPKDYWEWMTRHSKAEQIDRFIIILWCLWSHKNNL

A0A803PJK4 Uncharacterized protein1.3e-2642.76Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI
        +LAK +WRIL NP SL  R+L+ +YF+DG F+   LG+  SMTWR I+WG++L   G RWKVG+G  I    DPW+    S  P+    S  N  V  LI
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLI

Query:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKG
        + + +W    +K+NFL +D + I++IPL      D+IIW  +  G
Subjt:  NGNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKG

S8C3P3 Reverse transcriptase domain-containing protein3.6e-2740.22Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESL-KNKKVCTL
        +LAK  WRIL  P SLL ++L+GKY+R+ +F+  SLG + S TWRS+L  R+L   G RW  GDG  I I   PW+  +G   PI+    L    +V  L
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESL-KNKKVCTL

Query:  IN-GNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYWE-WMTRHSK----AEQIDRFIIILWCLW
        IN G   W   +I+  FLP+DA  I++IPLG G+  D +IW   K G       Y   W T H +    A   D F      LW
Subjt:  IN-GNGKWKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYWE-WMTRHSK----AEQIDRFIIILWCLW

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.4e-1142.11Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWI
        +LAK S+RI+  P++LL R+LR +YF   + ++ S+G   S  WRSI+ GR+L S+G    +GDG +  +  D WI
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein9.3e-1225.15Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNK------
        +L K  WR+L  P SL+ ++ + +YF   + +   LG+  S  W+SI   +++  +G R  VG+G  I I +  W++   +S+ +        +      
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNK------

Query:  --KVCTLINGNGK-WKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYW
          KV  LI+ +G+ W++D+I+  F  ++ + I  +  G  +  D   W     G+      YW
Subjt:  --KVCTLINGNGK-WKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-1242.11Show/hide
Query:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWI
        +LAK S+RI+  P++LL R+LR +YF   + ++ S+G   S  WRSI+ GR+L S+G    +GDG +  +  D WI
Subjt:  MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGCAAAGCACAGTTGGAGGATCTTAAGAAACCCTTATAGTTTACTCTTCAGAATCCTTAGAGGTAAATATTTCAGAGACGGAAATTTCATAAAGGTTTCA
TTGGGGAACAACCGTTCAATGACATGGAGGAGTATCTTATGGGGGAGAGACCTCTTCTCTAAAGGATATAGGTGGAAGGTAGGTGATGGGAGATACATAACCATA
GACCAAGACCCATGGATAAACATAGTAGGTAGTAGTTCTCCCATATGGACGAGTGAAAGTCTAAAAAACAAAAAGGTATGTACTCTGATCAATGGCAATGGGAAA
TGGAAAGAGGATATGATAAAAGCAAACTTTCTTCCTTTGGATGCAGAAGATATTATAAACATCCCGCTTGGAAAGGGAAAATCCAAAGATGAAATAATCTGGAGA
CTAGACAAGAAAGGGGAAGGGAAGAGCCCCAAAGACTACTGGGAGTGGATGACGAGACATAGCAAAGCAGAGCAAATTGACAGATTCATTATCATCTTATGGTGT
TTATGGTCCCACAAAAACAATCTCAACCAGCAACACTCTCAAATCAAGAACAAGCAATTGATTCACAAGCTGGAAAACAACTCAATTTTCAGCCACATTAACAGA
TCGATTCAAGAGATGGAAAGATTTGTTACCTCTAGATTGGACATTTTAAGAAGAGAGAACTTCGCAAGTCACAAAGAACCGTTCGCCTCATTGAAGTCGCCATCG
GAGAACGTTCTGAAGCTCAACACAGACGCCGCTTGCCTCAACCGTGACCTTCCTAAACAACTCTTTATTGAATCTGATGCCTCAGTGGTCGTCGACGCCATAAAT
GGAGTTTCAGAAGACTGGTCAAAGATGAGGAACGTTATAGATGTCATTGTGGCGGAAGCTTCGAAAATTGGATTAGTAAAATTTTTGAAGTGTAGGAGAAATTGC
AATAGTATTGTCCACAATCTTCCAAGGGTGTGTTCTGATATTTCTTTTGTGCAATCGGTTCATCTTCCCTCCGAAGGGGAATCAATTTTTTGGAGCGAAAATTTC
CCCGAGTGGCTCGTTTCAGCCATTGATATTTTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGCAAAGCACAGTTGGAGGATCTTAAGAAACCCTTATAGTTTACTCTTCAGAATCCTTAGAGGTAAATATTTCAGAGACGGAAATTTCATAAAGGTTTCA
TTGGGGAACAACCGTTCAATGACATGGAGGAGTATCTTATGGGGGAGAGACCTCTTCTCTAAAGGATATAGGTGGAAGGTAGGTGATGGGAGATACATAACCATA
GACCAAGACCCATGGATAAACATAGTAGGTAGTAGTTCTCCCATATGGACGAGTGAAAGTCTAAAAAACAAAAAGGTATGTACTCTGATCAATGGCAATGGGAAA
TGGAAAGAGGATATGATAAAAGCAAACTTTCTTCCTTTGGATGCAGAAGATATTATAAACATCCCGCTTGGAAAGGGAAAATCCAAAGATGAAATAATCTGGAGA
CTAGACAAGAAAGGGGAAGGGAAGAGCCCCAAAGACTACTGGGAGTGGATGACGAGACATAGCAAAGCAGAGCAAATTGACAGATTCATTATCATCTTATGGTGT
TTATGGTCCCACAAAAACAATCTCAACCAGCAACACTCTCAAATCAAGAACAAGCAATTGATTCACAAGCTGGAAAACAACTCAATTTTCAGCCACATTAACAGA
TCGATTCAAGAGATGGAAAGATTTGTTACCTCTAGATTGGACATTTTAAGAAGAGAGAACTTCGCAAGTCACAAAGAACCGTTCGCCTCATTGAAGTCGCCATCG
GAGAACGTTCTGAAGCTCAACACAGACGCCGCTTGCCTCAACCGTGACCTTCCTAAACAACTCTTTATTGAATCTGATGCCTCAGTGGTCGTCGACGCCATAAAT
GGAGTTTCAGAAGACTGGTCAAAGATGAGGAACGTTATAGATGTCATTGTGGCGGAAGCTTCGAAAATTGGATTAGTAAAATTTTTGAAGTGTAGGAGAAATTGC
AATAGTATTGTCCACAATCTTCCAAGGGTGTGTTCTGATATTTCTTTTGTGCAATCGGTTCATCTTCCCTCCGAAGGGGAATCAATTTTTTGGAGCGAAAATTTC
CCCGAGTGGCTCGTTTCAGCCATTGATATTTTGGAGTAG
Protein sequenceShow/hide protein sequence
MLAKHSWRILRNPYSLLFRILRGKYFRDGNFIKVSLGNNRSMTWRSILWGRDLFSKGYRWKVGDGRYITIDQDPWINIVGSSSPIWTSESLKNKKVCTLINGNGK
WKEDMIKANFLPLDAEDIINIPLGKGKSKDEIIWRLDKKGEGKSPKDYWEWMTRHSKAEQIDRFIIILWCLWSHKNNLNQQHSQIKNKQLIHKLENNSIFSHINR
SIQEMERFVTSRLDILRRENFASHKEPFASLKSPSENVLKLNTDAACLNRDLPKQLFIESDASVVVDAINGVSEDWSKMRNVIDVIVAEASKIGLVKFLKCRRNC
NSIVHNLPRVCSDISFVQSVHLPSEGESIFWSENFPEWLVSAIDILE