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Lcy03g007700 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy03g007700
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionethylene-responsive transcription factor 12
Genome locationChr03:38635522..38636191
RNA-Seq ExpressionLcy03g007700
SyntenyLcy03g007700
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583981.1 Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4169.13Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWP----TAAAAAICSPSSSS----ARLVLSDFLRHDARNDLCNVNV
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPP      LSLDLNVS  PT+ +WP    +AAAAA  +PSSSS    ARL+L DFLRH ARNDLCNVNV
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWP----TAAAAAICSPSSSS----ARLVLSDFLRHDARNDLCNVNV

Query:  NVEVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
                   +P L+DSS PA + TASF+GHVRRGLPFDLNEPPPVWL
Subjt:  NVEVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

XP_004146616.1 ethylene-responsive transcription factor 12 [Cucumis sativus]6.6e-4168.49Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC-----SPSSSSARLVLSDFLRHDARNDLCNVNVNVEV
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPPL    GLSLDLNVSGP    WPT  +A  C     SPS SS R +L DFLRH  RND+CN+NV+   
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC-----SPSSSSARLVLSDFLRHDARNDLCNVNVNVEV

Query:  SPATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL
               +PVL+DSSA  +S A+ASFIGHVRRGLPFDLNEPPPVWL
Subjt:  SPATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL

XP_008442801.1 PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo]2.3e-4170.14Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC---SPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPPL    GLSLDLNVSGP    WPT  +A  C   S SSSSAR +L DFLRH  RND+CN+NV+     
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC---SPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP

Query:  ATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL
             +PVL+D+SA A+S A+ASFIGHVRRGLPFDLNEPPPVWL
Subjt:  ATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL

XP_022927218.1 ethylene-responsive transcription factor 12-like [Cucurbita moschata]5.1e-4168.71Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPT------AAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNV
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPP      LSLDLNVS  PT+ +WP+      AAAA   S SSS+ARL+L DFLRH ARNDLCNVNV  
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPT------AAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNV

Query:  EVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
                 +P L+DSS PA + TASF+GHVRRGLPFDLNEPPPVWL
Subjt:  EVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

XP_023001756.1 ethylene-responsive transcription factor 12 [Cucurbita maxima]4.6e-4270.21Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSPAT
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPP      LSLDLNVS  PT+ +WP+++AA   S SSSSARL+L DFLRH ARNDLCNVNV        
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSPAT

Query:  KRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
           +P L+DS  PA + TASF+GHVRRGLPFDLNEPPPVWL
Subjt:  KRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

TrEMBL top hitse value%identityAlignment
A0A0A0LSE4 AP2/ERF domain-containing protein3.2e-4168.49Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC-----SPSSSSARLVLSDFLRHDARNDLCNVNVNVEV
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPPL    GLSLDLNVSGP    WPT  +A  C     SPS SS R +L DFLRH  RND+CN+NV+   
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC-----SPSSSSARLVLSDFLRHDARNDLCNVNVNVEV

Query:  SPATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL
               +PVL+DSSA  +S A+ASFIGHVRRGLPFDLNEPPPVWL
Subjt:  SPATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL

A0A1S3B631 ethylene-responsive transcription factor 121.1e-4170.14Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC---SPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPPL    GLSLDLNVSGP    WPT  +A  C   S SSSSAR +L DFLRH  RND+CN+NV+     
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC---SPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP

Query:  ATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL
             +PVL+D+SA A+S A+ASFIGHVRRGLPFDLNEPPPVWL
Subjt:  ATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL

A0A5D3DSV2 Ethylene-responsive transcription factor 121.1e-4170.14Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC---SPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPPL    GLSLDLNVSGP    WPT  +A  C   S SSSSAR +L DFLRH  RND+CN+NV+     
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAIC---SPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP

Query:  ATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL
             +PVL+D+SA A+S A+ASFIGHVRRGLPFDLNEPPPVWL
Subjt:  ATKRLAPVLMDSSAPAAS-ATASFIGHVRRGLPFDLNEPPPVWL

A0A6J1EKE1 ethylene-responsive transcription factor 12-like2.5e-4168.71Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPT------AAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNV
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPP      LSLDLNVS  PT+ +WP+      AAAA   S SSS+ARL+L DFLRH ARNDLCNVNV  
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPT------AAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNV

Query:  EVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
                 +P L+DSS PA + TASF+GHVRRGLPFDLNEPPPVWL
Subjt:  EVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

A0A6J1KJH9 ethylene-responsive transcription factor 122.2e-4270.21Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSPAT
        LGTFDT EEAALAYDGAARSLRGSKAKTNFPPP      LSLDLNVS  PT+ +WP+++AA   S SSSSARL+L DFLRH ARNDLCNVNV        
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSG-PTSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSPAT

Query:  KRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
           +P L+DS  PA + TASF+GHVRRGLPFDLNEPPPVWL
Subjt:  KRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

SwissProt top hitse value%identityAlignment
Q40477 Ethylene-responsive transcription factor 41.9e-0678.79Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPP
        LGTFDT EEAA AYD AAR  RG KAKTNFP P
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPP

Q94ID6 Ethylene-responsive transcription factor 123.5e-1641.57Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAICS--------------------PSSSSARLVLSDFLRH
        LGTFDT EEAALAYDGAAR LRG KAKTNFP P      LSLDLN       H P+A +AA  +                    PSS         FLR 
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAICS--------------------PSSSSARLVLSDFLRH

Query:  DARNDLCNVNVNVEV------SPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
           ND  +   + E       SP T   +P       P  +++ S +  VRRGL  DLNEPPP+WL
Subjt:  DARNDLCNVNVNVEV------SPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

Q9FE67 Ethylene-responsive transcription factor 98.5e-0781.82Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPP
        LGTFDT EEAA AYD AAR  RGSKAKTNFP P
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPP

Q9LW49 Ethylene-responsive transcription factor 41.5e-0655Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPL--SAAAGLSLDLNVSGPTSYHWPTAA
        LGTFDT EEAA AYD AAR  RG KAKTNFP P    + +  S   + SG T  H P  A
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPL--SAAAGLSLDLNVSGPTSYHWPTAA

Q9SXS8 Ethylene-responsive transcription factor 31.1e-0631.45Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGP---TSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP
        LGTFD+ E+AA AYD AAR+LRG KAKTNFP P +     +   N +      S  +P         P+SSS    +  F     R            S 
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGP---TSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVNVEVSP

Query:  ATKRLAPVLMDSSAPAASATASFIGH------------------VRRGLPFDLNEPPPV
           R  PV+ D       +++S + H                   R+ L FDLN PPP+
Subjt:  ATKRLAPVLMDSSAPAASATASFIGH------------------VRRGLPFDLNEPPPV

Arabidopsis top hitse value%identityAlignment
AT1G28360.1 ERF domain protein 122.5e-1741.57Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAICS--------------------PSSSSARLVLSDFLRH
        LGTFDT EEAALAYDGAAR LRG KAKTNFP P      LSLDLN       H P+A +AA  +                    PSS         FLR 
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAICS--------------------PSSSSARLVLSDFLRH

Query:  DARNDLCNVNVNVEV------SPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL
           ND  +   + E       SP T   +P       P  +++ S +  VRRGL  DLNEPPP+WL
Subjt:  DARNDLCNVNVNVEV------SPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL

AT1G50640.1 ethylene responsive element binding factor 32.3e-0762.22Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLN
        LGTFD+ EEAA AYD AAR+LRG KAKTNFP   S+    +L  N
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLN

AT1G80580.1 Integrase-type DNA-binding superfamily protein1.3e-0776.92Show/hide
Query:  CR--LGTFDTLEEAALAYDGAARSLRGSKAKTNFP-PPL
        CR  LGTFDT EEAA AYD AAR LRG+KAKTNF  PPL
Subjt:  CR--LGTFDTLEEAALAYDGAARSLRGSKAKTNFP-PPL

AT5G13910.1 Integrase-type DNA-binding superfamily protein1.8e-0760.42Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNF-----PPPLSAAAGLSLD
        LGTFDT EEAALAYD AARS+RG++A+TNF     PP  S  + +S D
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNF-----PPPLSAAAGLSLD

AT5G44210.1 erf domain protein 96.1e-0881.82Show/hide
Query:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPP
        LGTFDT EEAA AYD AAR  RGSKAKTNFP P
Subjt:  LGTFDTLEEAALAYDGAARSLRGSKAKTNFPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCGCTACGTCGCCGAGATACGCAACCCTTGGAAGAAGACCCGTGTCGGTTGGGCACTTTCGACACTCTTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCAG
GTCCCTCCGCGGCTCCAAGGCTAAAACCAACTTCCCCCCACCTCTCTCCGCCGCTGCCGGCCTCTCCCTCGACCTCAACGTCTCCGGACCCACTTCCTACCACTGGCCCA
CTGCCGCCGCCGCCGCCATTTGCTCGCCGTCTTCCTCTTCTGCCCGTCTCGTCCTCAGCGATTTCCTCCGGCACGACGCTCGCAACGACCTGTGCAATGTGAATGTCAAT
GTGGAGGTGTCTCCGGCGACGAAACGCCTCGCTCCCGTGCTGATGGACTCGAGCGCTCCGGCGGCCTCCGCTACGGCGTCGTTCATTGGGCACGTGCGGCGTGGCCTCCC
CTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGA
mRNA sequenceShow/hide mRNA sequence
TTTCTCTTTCTCTCTTCTCTCTCGTTTTCGTTGTTTCCTTCCCCCATGACTTCCACTCGCGAGGGCCACTACAGAGGCGTCAGAAAGCGCCCATGGGGTCGCTACGTCGC
CGAGATACGCAACCCTTGGAAGAAGACCCGTGTCGGTTGGGCACTTTCGACACTCTTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAA
GGCTAAAACCAACTTCCCCCCACCTCTCTCCGCCGCTGCCGGCCTCTCCCTCGACCTCAACGTCTCCGGACCCACTTCCTACCACTGGCCCACTGCCGCCGCCGCCGCCA
TTTGCTCGCCGTCTTCCTCTTCTGCCCGTCTCGTCCTCAGCGATTTCCTCCGGCACGACGCTCGCAACGACCTGTGCAATGTGAATGTCAATGTGGAGGTGTCTCCGGCG
ACGAAACGCCTCGCTCCCGTGCTGATGGACTCGAGCGCTCCGGCGGCCTCCGCTACGGCGTCGTTCATTGGGCACGTGCGGCGTGGCCTCCCCTTTGATCTCAACGAGCC
TCCACCGGTGTGGCTATGATTCATTCAAAAGAAACCCCCCACGGCTTCTATCGGCGTTTTTTACGGACATCACTTTCTCATTTCTCTCTCCCTTTTTTCGTTTTTATTTT
TGACAATCCT
Protein sequenceShow/hide protein sequence
MGSLRRRDTQPLEEDPCRLGTFDTLEEAALAYDGAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSGPTSYHWPTAAAAAICSPSSSSARLVLSDFLRHDARNDLCNVNVN
VEVSPATKRLAPVLMDSSAPAASATASFIGHVRRGLPFDLNEPPPVWL