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Lcy03g010180 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy03g010180
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr03:43912760..43915928
RNA-Seq ExpressionLcy03g010180
SyntenyLcy03g010180
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]1.8e-3545.1Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW D FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W++  +F+ K+K WW E    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

RVW94236.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]9.8e-3443.24Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        ++R + E+M  S+   +MR F+ FI   +L+DPP+ N +F+WS M E     RLDRFL S  W  +FP+   E L R TSDH+PI+M      WGPTPFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNK
        FEN+W++ + F++  + WW     +GW G + M +L+ +K  +KEWNK
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNK

RVX05736.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]9.8e-3443.24Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        ++R + E+M  S+   +MR F+ FI   +L+DPP+ N +F+WS M E     RLDRFL S  W  +FP+   E L R TSDH+PI+M      WGPTPFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNK
        FEN+W++ + F++  + WW     +GW G + M +L+ +K  +KEWNK
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNK

RVX11280.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]9.8e-3443.24Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        ++R + E+M  S+   +MR F+ FI   +L+DPP+ N +F+WS M E     RLDRFL S  W  +FP+   E L R TSDH+PI+M      WGPTPFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNK
        FEN+W++ + F++  + WW     +GW G + M +L+ +K  +KEWNK
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNK

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]1.8e-3545.1Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW D FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W++  +F+ K+K WW E    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

TrEMBL top hitse value%identityAlignment
A0A4Y1RS61 TatD related DNase8.6e-3645.1Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW D FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W++  +F+ K+K WW E    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)8.6e-3645.1Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW D FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W++  +F+ K+K WW E    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

M5VS59 Reverse transcriptase domain-containing protein (Fragment)8.6e-3645.75Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW D FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W+   +F  K+K WWGE    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.5e-3545.1Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW + FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W+   +F+ K+K WWGE    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

M5WPQ5 Reverse transcriptase domain-containing protein1.9e-3545.1Show/hide
Query:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR
        +VR++ E+ N     K+MR FN FI   +L DP ++N +F+WS + E     RLDRFL+S SW + FP  R + L R TSDH PI +    V WGP+PFR
Subjt:  MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFR

Query:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN
        FEN+W+   +F+ K+K WWGE    GW G++ M +LK LK  +K W+KE   +
Subjt:  FENLWIELSEFRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGATGGGCGGAGGAGAGGATGAATGCTAGCAATTCGGTGAAGAACATGAGAAAATTTAACCGGTTCATCGTGTCCCTTGACCTTATCGATCCTCCAATGGTTAA
TGGGGCGTTCTCTTGGTCGAGAATGGGAGAAAGAGTGGCTGCTTCCAGATTAGACAGATTCTTGATCTCGAAATCTTGGAATGATGTTTTCCCGGAGCTTAGAGTTGAGA
GGTTGCAAAGACCCACGTCGGATCACTTCCCCATTTTGATGTCTATTGGGGTGGTTAATTGGGGGCCTACTCCCTTTAGATTTGAGAATCTCTGGATAGAGTTATCTGAA
TTTAGAGACAAGGTAAAGCAGTGGTGGGGCGAATTAAATCCTAGTGGTTGGGCGGGATTCAGATTGATGGAGAAATTGAAAAGATTGAAAGTTTTGATTAAAGAATGGAA
TAAGGAGCGTATGGCTAATGCCATCGGGCTTCTTTATGGCTTTTGTGGAAGGAAAGGAACTCTAGAACTTTTGAAGATTTTAGGGCTTCTTTATGGCTTTTGTGGAAGGA
AAGGAACTCTAGAACTTTTGAAGATAAGTCGGCTACTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGATGGGCGGAGGAGAGGATGAATGCTAGCAATTCGGTGAAGAACATGAGAAAATTTAACCGGTTCATCGTGTCCCTTGACCTTATCGATCCTCCAATGGTTAA
TGGGGCGTTCTCTTGGTCGAGAATGGGAGAAAGAGTGGCTGCTTCCAGATTAGACAGATTCTTGATCTCGAAATCTTGGAATGATGTTTTCCCGGAGCTTAGAGTTGAGA
GGTTGCAAAGACCCACGTCGGATCACTTCCCCATTTTGATGTCTATTGGGGTGGTTAATTGGGGGCCTACTCCCTTTAGATTTGAGAATCTCTGGATAGAGTTATCTGAA
TTTAGAGACAAGGTAAAGCAGTGGTGGGGCGAATTAAATCCTAGTGGTTGGGCGGGATTCAGATTGATGGAGAAATTGAAAAGATTGAAAGTTTTGATTAAAGAATGGAA
TAAGGAGCGTATGGCTAATGCCATCGGGCTTCTTTATGGCTTTTGTGGAAGGAAAGGAACTCTAGAACTTTTGAAGATTTTAGGGCTTCTTTATGGCTTTTGTGGAAGGA
AAGGAACTCTAGAACTTTTGAAGATAAGTCGGCTACTATAG
Protein sequenceShow/hide protein sequence
MVRWAEERMNASNSVKNMRKFNRFIVSLDLIDPPMVNGAFSWSRMGERVAASRLDRFLISKSWNDVFPELRVERLQRPTSDHFPILMSIGVVNWGPTPFRFENLWIELSE
FRDKVKQWWGELNPSGWAGFRLMEKLKRLKVLIKEWNKERMANAIGLLYGFCGRKGTLELLKILGLLYGFCGRKGTLELLKISRLL