CuGenDBv2

Gene ID	Lcy03g013530
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Alba domain-containing protein
Genome location	Chr03:47525361..47527004
RNA-Seq Expression	Lcy03g013530
Synteny	Lcy03g013530
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related IPR036882 - Alba-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004150019.1 uncharacterized protein At2g34160 [Cucumis sativus]

3.2e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022924689.1 uncharacterized protein At2g34160-like [Cucurbita moschata]

7.2e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEEREN DGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022961070.1 uncharacterized protein At2g34160-like [Cucurbita moschata]

1.1e-19

54.62

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022972044.1 uncharacterized protein At2g34160-like [Cucurbita maxima]

7.2e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEEREN DGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022987902.1 uncharacterized protein At2g34160-like [Cucurbita maxima]

4.2e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAA EERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZB6 Alba domain-containing protein

1.6e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A1S3B8Y2 uncharacterized protein At2g34160-like

1.6e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A5A7TV88 Alba domain-containing protein

1.6e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A6J1CUJ0 uncharacterized protein At2g34160-like

1.6e-19

53.85

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A6J1HAY2 uncharacterized protein At2g34160-like

5.3e-20

54.62

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

SwissProt top hits

e value

%identity

Alignment

O22969 Uncharacterized protein At2g34160

4.0e-12

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EI L K+E FDELMAAA EE+E+ + + Q+
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

Arabidopsis top hits

e value

%identity

Alignment

AT1G29250.1 Alba DNA/RNA-binding protein

4.3e-14

40.77

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEITEGVN++ L  D+QKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EI L K+E FDELMAAA EE+E  + +EQ+
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

AT2G34160.1 Alba DNA/RNA-binding protein

2.8e-13

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Query:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI
        MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNL                                                           AKI
Subjt:  MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNL-----------------------------------------------------------AKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EI L K+E FDELMAAA EE+E+ + + Q+
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

AT3G04620.1 Alba DNA/RNA-binding protein

6.7e-07

85.19

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Query:  TADSQKKNRIQVSNTKKPLFFYVNLAK
        T ++ KKNRIQVSNTKKPLFFYVNLAK
Subjt:  TADSQKKNRIQVSNTKKPLFFYVNLAK

Sequences

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CDS sequence

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ATGGAAGAGATAACGGAGGGTGTCAACTCCATCGCCTTGACAGCTGATTCGCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAGCCCCTATTCTTCTAT
GTCAATCTCGCTAAGATTGAGATTGTGCTGGGAAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAG
AGTTGA

mRNA sequence

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Protein sequence

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MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKIEIVLGKTENFDELMAAAAEERENEDGEEQS

Lcy03g013530 (gene) of Sponge gourd (P93075) v1 genome