; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy03g018140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy03g018140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReplication protein A 32 kDa subunit B
Genome locationChr03:51893767..51894372
RNA-Seq ExpressionLcy03g018140
SyntenyLcy03g018140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058272.1 hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa]7.2e-6375.92Show/hide
Query:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH   RLSEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSNDE   S+SLSCISYSLSS+SS+ASSS  Y +RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF

KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5471.04Show/hide
Query:  DHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVP-KQEPVKIW
        + H L LSE PFSLLQANELFV+KILSRNSS GRSARLPACRLPGQIPF WEAQPGLPKD+PSE     +L+PP    S +G SK P  VP +QE  KIW
Subjt:  DHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVP-KQEPVKIW

Query:  FWKKPKRKV--VVRKNGAFG--SSSRRHVDRESELCRKSNDE-SASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIR
        FW KP++K+  VV+KNGAFG  SSSRRHV++ESE  RKSNDE S+SLSCIS+SLSSSS   SSS+GY RRRSKL SLAKGF+R
Subjt:  FWKKPKRKV--VVRKNGAFG--SSSRRHVDRESELCRKSNDE-SASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIR

KGN65459.1 hypothetical protein Csa_020126 [Cucumis sativus]1.5e-6073.68Show/hide
Query:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH   RLSEKPFSLLQAN+LFV+KILSRNSSFGRSARLPAC LPGQ+PFNWEAQPGLPK+QPS+  PP  L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESELCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+K+GA GSSS RRHVDR+SE CR KSNDE   S+SLSCISYS+SS+SS+ASSS  Y +RRR KLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESELCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF

TYK11824.1 hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa]2.7e-6275.39Show/hide
Query:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH   RLSEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSND    S+SLSCISYSLSS+SS+ASSS  Y +RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF

XP_022987494.1 uncharacterized protein LOC111485037 [Cucurbita maxima]4.6e-5469.31Show/hide
Query:  HHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW
        H L  SE PFSLLQANELFV+KILSRNSS GRSARLPACRLPGQIPF WEAQPGLPKD+PSE     +L PP      +G SK P  VPK QE  KIW W
Subjt:  HHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW

Query:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESELCRKSNDES------ASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIRWAF
         KP++K+  VV+KNGAFG  SSSR HV++ESE CRKSNDES      +SLSCIS+SLSSSS   SSS+GY RRRSKL SLAKGF+RWAF
Subjt:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESELCRKSNDES------ASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIRWAF

TrEMBL top hitse value%identityAlignment
A0A0A0LWV3 Uncharacterized protein7.2e-6173.68Show/hide
Query:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH   RLSEKPFSLLQAN+LFV+KILSRNSSFGRSARLPAC LPGQ+PFNWEAQPGLPK+QPS+  PP  L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESELCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+K+GA GSSS RRHVDR+SE CR KSNDE   S+SLSCISYS+SS+SS+ASSS  Y +RRR KLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESELCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF

A0A314YA94 Uncharacterized protein1.2e-1235.58Show/hide
Query:  KPFSLLQANELFVNKILSRNSSFGRSARLPAC--RLPGQIPFNWEAQPGLPK----DQPSE--------ILPPADLEPPTGSGSGEGLSKLPRIVPKQEP
        K  ++  ANE F NKILSRNSS G S+       R+ G +PF WEA+PG PK    D+  +          PP  + PP  + S   ++ LP        
Subjt:  KPFSLLQANELFVNKILSRNSSFGRSARLPAC--RLPGQIPFNWEAQPGLPK----DQPSE--------ILPPADLEPPTGSGSGEGLSKLPRIVPKQEP

Query:  VKIWFWKKPKR--------KVVVRKNGA--FGSSSRRHVDRESELCRKSNDE--------SASLSCISYSLSSS-----SSTASSSHGYDRRRSKLGSLA
         ++W WKK K+        K + + NG   F ++    +  +++LC KS++E        S+S SC S SLSS+     SS++SS+   + R SK+  LA
Subjt:  VKIWFWKKPKR--------KVVVRKNGA--FGSSSRRHVDRESELCRKSNDE--------SASLSCISYSLSSS-----SSTASSSHGYDRRRSKLGSLA

Query:  KGFIRWAF
        +GFIRWAF
Subjt:  KGFIRWAF

A0A5A7UQX0 Uncharacterized protein3.5e-6375.92Show/hide
Query:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH   RLSEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSNDE   S+SLSCISYSLSS+SS+ASSS  Y +RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF

A0A5D3CKX4 Uncharacterized protein1.3e-6275.39Show/hide
Query:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH   RLSEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSND    S+SLSCISYSLSS+SS+ASSS  Y +RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESELC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-DRRRSKLGSLAKGFIRWAF

A0A6J1JJ17 uncharacterized protein LOC1114850372.3e-5469.31Show/hide
Query:  HHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW
        H L  SE PFSLLQANELFV+KILSRNSS GRSARLPACRLPGQIPF WEAQPGLPKD+PSE     +L PP      +G SK P  VPK QE  KIW W
Subjt:  HHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW

Query:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESELCRKSNDES------ASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIRWAF
         KP++K+  VV+KNGAFG  SSSR HV++ESE CRKSNDES      +SLSCIS+SLSSSS   SSS+GY RRRSKL SLAKGF+RWAF
Subjt:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESELCRKSNDES------ASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIRWAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGATCATCATCATCTTCGTCTCTCTGAAAAACCCTTTTCATTACTCCAAGCAAATGAGTTATTCGTCAACAAAATCCTCTCCAGAAACTCTTCATTCGGCCG
CTCTGCCCGTCTCCCCGCCTGCCGCCTGCCCGGCCAAATCCCCTTCAATTGGGAAGCGCAGCCCGGGCTGCCCAAAGACCAACCCTCGGAAATTCTCCCGCCGGCCGACC
TCGAGCCACCGACCGGCTCCGGCTCCGGCGAAGGCCTCTCGAAACTCCCCCGCATAGTCCCCAAGCAGGAGCCTGTGAAGATTTGGTTTTGGAAAAAGCCGAAGAGAAAA
GTCGTTGTTAGGAAAAACGGTGCGTTTGGATCGTCTTCAAGACGACATGTCGATCGTGAGAGTGAGCTTTGTAGAAAATCAAACGACGAGTCCGCGTCGTTGTCCTGTAT
TTCTTACTCCTTGTCTTCTAGTTCTTCTACGGCCTCGTCGTCACATGGCTATGACCGACGCCGGTCTAAACTCGGCAGCCTGGCCAAAGGGTTCATAAGGTGGGCCTTTT
GA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAATAAAGAAAAACAAAAGCCATGGCGAAGGATCATCATCATCTTCGTCTCTCTGAAAAACCCTTTTCATTACTCCAAGCAAATGAGTTATTCGTCAACAAAAT
CCTCTCCAGAAACTCTTCATTCGGCCGCTCTGCCCGTCTCCCCGCCTGCCGCCTGCCCGGCCAAATCCCCTTCAATTGGGAAGCGCAGCCCGGGCTGCCCAAAGACCAAC
CCTCGGAAATTCTCCCGCCGGCCGACCTCGAGCCACCGACCGGCTCCGGCTCCGGCGAAGGCCTCTCGAAACTCCCCCGCATAGTCCCCAAGCAGGAGCCTGTGAAGATT
TGGTTTTGGAAAAAGCCGAAGAGAAAAGTCGTTGTTAGGAAAAACGGTGCGTTTGGATCGTCTTCAAGACGACATGTCGATCGTGAGAGTGAGCTTTGTAGAAAATCAAA
CGACGAGTCCGCGTCGTTGTCCTGTATTTCTTACTCCTTGTCTTCTAGTTCTTCTACGGCCTCGTCGTCACATGGCTATGACCGACGCCGGTCTAAACTCGGCAGCCTGG
CCAAAGGGTTCATAAGGTGGGCCTTTTGATGGATTTTTTTTATTTTTATTTTTAAT
Protein sequenceShow/hide protein sequence
MAKDHHHLRLSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKIWFWKKPKRK
VVVRKNGAFGSSSRRHVDRESELCRKSNDESASLSCISYSLSSSSSTASSSHGYDRRRSKLGSLAKGFIRWAF