; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g000130 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g000130
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr04:230241..231333
RNA-Seq ExpressionLcy04g000130
SyntenyLcy04g000130
Gene Ontology termsNA
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65999.1 hypothetical protein VITISV_007696 [Vitis vinifera]2.0e-3952.2Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLWDY A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

RVW74167.1 hypothetical protein CK203_057274 [Vitis vinifera]1.2e-3952.2Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLWDY A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

RVW80965.1 hypothetical protein CK203_054666 [Vitis vinifera]4.4e-3951.57Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R   + I+     QY+RLWDY A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

RVW89742.1 hypothetical protein CK203_047251 [Vitis vinifera]4.4e-3951.57Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLWDY   +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

XP_030922963.1 uncharacterized protein LOC115949829 [Quercus lobata]2.0e-3942.38Show/hide
Query:  MNGDPEFREDTDMDRIEFVIGMLFSTASSQAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLV
        +  DP  +     DR+  V       +  QA RA+ +A   ++ T T QY +L DYC EL R N GS + I  +R      P F RLY+CL  CK GFL 
Subjt:  MNGDPEFREDTDMDRIEFVIGMLFSTASSQAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLV

Query:  GCRPFISLDACHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLL-------------------RGLVPTFNDVFPGVDHRFCVRTCMP
         CRPFI +D CHLKG   G +++AVG DGN+ +YPIA+A+VEAETK+SWTWF++ L                   +GL   F+++ PGVDHRFCVR    
Subjt:  GCRPFISLDACHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLL-------------------RGLVPTFNDVFPGVDHRFCVRTCMP

Query:  ISKSNSKDWR
        +  + SKD++
Subjt:  ISKSNSKDWR

TrEMBL top hitse value%identityAlignment
A0A438CWF2 SWIM-type domain-containing protein2.1e-3951.57Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLW+Y A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

A0A438GPP9 SWIM-type domain-containing protein5.6e-4052.2Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLWDY A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

A0A438H904 SWIM-type domain-containing protein2.1e-3951.57Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R   + I+     QY+RLWDY A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

A0A438HZ86 SWIM-type domain-containing protein2.1e-3951.57Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLWDY   +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

A5BTQ2 SWIM-type domain-containing protein9.6e-4052.2Show/hide
Query:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG
        Q Y+A+R A + I+     QY+RLWDY A +R+ N GS VKI      +  N VF R+YICL  CK GFL GCRP I +D CHLKG   G L+ AVG DG
Subjt:  QAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDG

Query:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR
        ND+++PIA+AIVE E K+SWTWFL+ L            GLV TF D+ P  +HRFCVR
Subjt:  NDDLYPIAWAIVEAETKNSWTWFLRLLR-----------GLVPTFNDVFPGVDHRFCVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase5.8e-0535.71Show/hide
Query:  CRPFISLDACHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLLR
        CRP I +D  +L    Q  LM A G+D  +  +P+A+A+ +  + + W WFL  +R
Subjt:  CRPFISLDACHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLLR

AT1G64260.1 MuDR family transposase3.6e-0732.53Show/hide
Query:  FRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLLRGLVPTFNDV
        FR ++       +GF   CRP I +D   L G  Q  LM A G+D  +  +P+A+A+ +  + +SW WF   +R  V    D+
Subjt:  FRRLYICLKGCKDGFLVGCRPFISLDACHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLLRGLVPTFNDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGGGATCCTGAGTTTAGAGAAGACACAGACATGGATAGGATTGAATTTGTCATTGGAATGTTGTTTAGCACCGCTAGTAGCCAAGCATATAGGGCTAGAAGGAA
GGCAGTTAGAGAGATTAATAGGACTATGACTGCACAATACCAACGGTTGTGGGATTATTGTGCTGAGCTTCGGAGGTTGAATGAGGGATCATTTGTGAAAATACTATGTG
ATAGGGTGACTGAGGACAATAATCCTGTATTTAGACGCCTATACATTTGCTTGAAGGGTTGCAAGGATGGTTTCTTGGTAGGATGTAGACCATTCATTTCACTAGACGCA
TGCCACTTGAAGGGTCCATGTCAAGGACACCTTATGTCTGCGGTTGGAATGGATGGGAATGACGACCTTTACCCTATAGCATGGGCTATAGTCGAGGCAGAAACGAAGAA
CAGTTGGACATGGTTTCTTCGTTTGCTCAGAGGATTGGTACCCACTTTCAATGATGTGTTTCCTGGAGTTGATCACCGTTTTTGTGTGAGGACCTGTATGCCAATTTCCA
AAAGCAATTCAAAGGATTGGCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGGGATCCTGAGTTTAGAGAAGACACAGACATGGATAGGATTGAATTTGTCATTGGAATGTTGTTTAGCACCGCTAGTAGCCAAGCATATAGGGCTAGAAGGAA
GGCAGTTAGAGAGATTAATAGGACTATGACTGCACAATACCAACGGTTGTGGGATTATTGTGCTGAGCTTCGGAGGTTGAATGAGGGATCATTTGTGAAAATACTATGTG
ATAGGGTGACTGAGGACAATAATCCTGTATTTAGACGCCTATACATTTGCTTGAAGGGTTGCAAGGATGGTTTCTTGGTAGGATGTAGACCATTCATTTCACTAGACGCA
TGCCACTTGAAGGGTCCATGTCAAGGACACCTTATGTCTGCGGTTGGAATGGATGGGAATGACGACCTTTACCCTATAGCATGGGCTATAGTCGAGGCAGAAACGAAGAA
CAGTTGGACATGGTTTCTTCGTTTGCTCAGAGGATTGGTACCCACTTTCAATGATGTGTTTCCTGGAGTTGATCACCGTTTTTGTGTGAGGACCTGTATGCCAATTTCCA
AAAGCAATTCAAAGGATTGGCGTTGA
Protein sequenceShow/hide protein sequence
MNGDPEFREDTDMDRIEFVIGMLFSTASSQAYRARRKAVREINRTMTAQYQRLWDYCAELRRLNEGSFVKILCDRVTEDNNPVFRRLYICLKGCKDGFLVGCRPFISLDA
CHLKGPCQGHLMSAVGMDGNDDLYPIAWAIVEAETKNSWTWFLRLLRGLVPTFNDVFPGVDHRFCVRTCMPISKSNSKDWR