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Lcy04g000140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g000140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr04:231390..232081
RNA-Seq ExpressionLcy04g000140
SyntenyLcy04g000140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVX10953.1 hypothetical protein CK203_013267 [Vitis vinifera]2.5e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

RVX16047.1 hypothetical protein CK203_005690 [Vitis vinifera]3.2e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

XP_030929462.1 uncharacterized protein LOC115955478 [Quercus lobata]2.5e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

XP_030955781.1 uncharacterized protein LOC115977893 [Quercus lobata]2.5e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

XP_030964516.1 uncharacterized protein LOC115985755 [Quercus lobata]1.9e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K +
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

TrEMBL top hitse value%identityAlignment
A0A1S3VWV3 uncharacterized protein LOC1067791312.0e-1944.54Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M EL  L+V+A+ ++  IP+KFW +H+F    + D+L+NN SESFN+ I  ARDKPII M+E IR  +M R     +      G++ PK R + +KE ++
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVEVG
        +GN +PVWAG   FEV  G
Subjt:  AGNAIPVWAGNLLFEVEVG

A0A438C8K5 SWIM-type domain-containing protein1.6e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

A0A438CWF2 SWIM-type domain-containing protein1.6e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

A0A438JPT3 SWIM-type domain-containing protein1.2e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

A0A438K4C8 ZnF_PMZ domain-containing protein1.6e-1944.44Show/hide
Query:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR
        M+EL KLDV AY+++  +  + WSRH+F    KSD L+NN +ESFNA+I EARDKP++ M+E+IR ++M R+  K       +G + P+I  K E+ K  
Subjt:  MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKR

Query:  AGNAIPVWAGNLLFEVE
         G+ I  W G   +EVE
Subjt:  AGNAIPVWAGNLLFEVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTTGGGAAAACTTGACGTGAATGCCTACCAATATGTAAAGAACATTCCTTCAAAGTTTTGGTCAAGGCACTCATTCCAAACCAGCTGTAAGTCTGAC
CTCCTTCTGAACAATAACTCTGAGTCATTTAATGCTTTCATCAATGAAGCTAGGGACAAACCCATAATACAGATGCTAGAAGTGATTCGCAAGCTGGTGATGACT
AGAATCACAAAGAAATTTCAGATGTACAGTGGACTGGATGGAAATTTAGGGCCGAAGATTCGTAGTAAGCAAGAAAAGGAAAAGAAACGTGCTGGCAATGCAATA
CCTGTCTGGGCTGGGAATCTATTGTTCGAGGTTGAGGTAGGACAAATCCGCTACAGCCACCTAAACTTAAACGACCCCCAGGACGACCAAGAAGGCAACAGAGGA
GAGATGCAAGTGAACCTGGACCTTCACAACCTGTTAGGAGACAAACACCTACGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTTGGGAAAACTTGACGTGAATGCCTACCAATATGTAAAGAACATTCCTTCAAAGTTTTGGTCAAGGCACTCATTCCAAACCAGCTGTAAGTCTGAC
CTCCTTCTGAACAATAACTCTGAGTCATTTAATGCTTTCATCAATGAAGCTAGGGACAAACCCATAATACAGATGCTAGAAGTGATTCGCAAGCTGGTGATGACT
AGAATCACAAAGAAATTTCAGATGTACAGTGGACTGGATGGAAATTTAGGGCCGAAGATTCGTAGTAAGCAAGAAAAGGAAAAGAAACGTGCTGGCAATGCAATA
CCTGTCTGGGCTGGGAATCTATTGTTCGAGGTTGAGGTAGGACAAATCCGCTACAGCCACCTAAACTTAAACGACCCCCAGGACGACCAAGAAGGCAACAGAGGA
GAGATGCAAGTGAACCTGGACCTTCACAACCTGTTAGGAGACAAACACCTACGGTAA
Protein sequenceShow/hide protein sequence
MEELGKLDVNAYQYVKNIPSKFWSRHSFQTSCKSDLLLNNNSESFNAFINEARDKPIIQMLEVIRKLVMTRITKKFQMYSGLDGNLGPKIRSKQEKEKKRAGNAI
PVWAGNLLFEVEVGQIRYSHLNLNDPQDDQEGNRGEMQVNLDLHNLLGDKHLR