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Lcy04g000190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g000190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationChr04:367275..367911
RNA-Seq ExpressionLcy04g000190
SyntenyLcy04g000190
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131632.1 UPF0481 protein At3g47200-like [Momordica charantia]9.8e-3346.15Show/hide
Query:  MKFDNVGMHEQNNK---AGGIANID---EVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR
        M+ +++  H+Q N      GI+N+D   EVE+ Q +S    SI+  ++++ PI EECSIYRVS+RL   +   + PQ ISIGPFHHGR++LMAMEQLKLR
Subjt:  MKFDNVGMHEQNNK---AGGIANID---EVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR

Query:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTSWFI
         L+ YL R   + ++    I R WE  AR CYAEPI+M S++FV MMLVDGCF+VE       +     +GS       W+I
Subjt:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTSWFI

XP_022155136.1 UPF0481 protein At3g47200-like [Momordica charantia]4.7e-3550.28Show/hide
Query:  MKFDNVGMHEQNNKAG--GIANIDEVE----QRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR
        M+ ++VG H+QN   G  GIANI +VE      Q +S    SI+K++ ++ P+ EECSIYRVS+RL   +   + PQ ISIGPFHHGR++LMAMEQLKLR
Subjt:  MKFDNVGMHEQNNKAG--GIANIDEVE----QRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR

Query:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTS
         L+ YL R   + ++    I R WE  AR CYAEPI+M S++FV MMLVDGCF+VEL   +   FS TQ     P+F++
Subjt:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTS

XP_022158989.1 UPF0481 protein At3g47200-like isoform X1 [Momordica charantia]1.6e-4362.82Show/hide
Query:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR
        QNNK      + N+DEV           SI+K++QE+PP+ EEC+I+RV RRL++RN   Y PQIISIGPFHHGRQDLM MEQ KLR L+ YL R+ +  
Subjt:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR

Query:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ
        IEV V IVRSWE +ARNCYAEPINMDSDEFVKMMLVDGCFIVELM  +C + S+T+
Subjt:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ

XP_022158990.1 UPF0481 protein At3g47200-like isoform X2 [Momordica charantia]1.6e-4362.82Show/hide
Query:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR
        QNNK      + N+DEV           SI+K++QE+PP+ EEC+I+RV RRL++RN   Y PQIISIGPFHHGRQDLM MEQ KLR L+ YL R+ +  
Subjt:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR

Query:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ
        IEV V IVRSWE +ARNCYAEPINMDSDEFVKMMLVDGCFIVELM  +C + S+T+
Subjt:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ

XP_022158992.1 UPF0481 protein At3g47200-like isoform X3 [Momordica charantia]3.6e-4364.38Show/hide
Query:  IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRS
        + N+DEV           SI+K++QE+PP+ EEC+I+RV RRL++RN   Y PQIISIGPFHHGRQDLM MEQ KLR L+ YL R+ +  IEV V IVRS
Subjt:  IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRS

Query:  WEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ
        WE +ARNCYAEPINMDSDEFVKMMLVDGCFIVELM  +C + S+T+
Subjt:  WEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ

TrEMBL top hitse value%identityAlignment
A0A6J1BRK2 UPF0481 protein At3g47200-like4.7e-3346.15Show/hide
Query:  MKFDNVGMHEQNNK---AGGIANID---EVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR
        M+ +++  H+Q N      GI+N+D   EVE+ Q +S    SI+  ++++ PI EECSIYRVS+RL   +   + PQ ISIGPFHHGR++LMAMEQLKLR
Subjt:  MKFDNVGMHEQNNK---AGGIANID---EVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR

Query:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTSWFI
         L+ YL R   + ++    I R WE  AR CYAEPI+M S++FV MMLVDGCF+VE       +     +GS       W+I
Subjt:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTSWFI

A0A6J1DQT2 UPF0481 protein At3g47200-like2.3e-3550.28Show/hide
Query:  MKFDNVGMHEQNNKAG--GIANIDEVE----QRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR
        M+ ++VG H+QN   G  GIANI +VE      Q +S    SI+K++ ++ P+ EECSIYRVS+RL   +   + PQ ISIGPFHHGR++LMAMEQLKLR
Subjt:  MKFDNVGMHEQNNKAG--GIANIDEVE----QRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR

Query:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTS
         L+ YL R   + ++    I R WE  AR CYAEPI+M S++FV MMLVDGCF+VEL   +   FS TQ     P+F++
Subjt:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTS

A0A6J1DXD6 UPF0481 protein At3g47200-like isoform X27.8e-4462.82Show/hide
Query:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR
        QNNK      + N+DEV           SI+K++QE+PP+ EEC+I+RV RRL++RN   Y PQIISIGPFHHGRQDLM MEQ KLR L+ YL R+ +  
Subjt:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR

Query:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ
        IEV V IVRSWE +ARNCYAEPINMDSDEFVKMMLVDGCFIVELM  +C + S+T+
Subjt:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ

A0A6J1DYL4 UPF0481 protein At3g47200-like isoform X31.7e-4364.38Show/hide
Query:  IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRS
        + N+DEV           SI+K++QE+PP+ EEC+I+RV RRL++RN   Y PQIISIGPFHHGRQDLM MEQ KLR L+ YL R+ +  IEV V IVRS
Subjt:  IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRS

Query:  WEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ
        WE +ARNCYAEPINMDSDEFVKMMLVDGCFIVELM  +C + S+T+
Subjt:  WEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ

A0A6J1E120 UPF0481 protein At3g47200-like isoform X17.8e-4462.82Show/hide
Query:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR
        QNNK      + N+DEV           SI+K++QE+PP+ EEC+I+RV RRL++RN   Y PQIISIGPFHHGRQDLM MEQ KLR L+ YL R+ +  
Subjt:  QNNKAGG---IANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLR

Query:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ
        IEV V IVRSWE +ARNCYAEPINMDSDEFVKMMLVDGCFIVELM  +C + S+T+
Subjt:  IEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQ

SwissProt top hitse value%identityAlignment
P0C897 Putative UPF0481 protein At3g026456.6e-0830.69Show/hide
Query:  SIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVEL
        SI+ V + L+  +  +YTP  +SIGP+H  + +L  ME+ KL       ++  S R   +V  ++S E   R CY + I  + +  + +M VD  F++E 
Subjt:  SIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVEL

Query:  M
        +
Subjt:  M

Q9SD53 UPF0481 protein At3g472003.4e-1232.82Show/hide
Query:  EECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIE--VIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGC
        E C I+RV    V  N   Y P+++SIGP+H+G + L  ++Q K R L  +L  +K   +E  V+V  V   E   R  Y+E +    D  + MM++DGC
Subjt:  EECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIE--VIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGC

Query:  FIVELMTTICGVFSKTQNGSIRPIFTSWFIL
        FI+ +   + G    +++    PIF+  ++L
Subjt:  FIVELMTTICGVFSKTQNGSIRPIFTSWFIL

Arabidopsis top hitse value%identityAlignment
AT2G36430.1 Plant protein of unknown function (DUF247)6.4e-2239.37Show/hide
Query:  ESIQKLVQEIPPILEE------CSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAE
        E + K ++E P +L        CSI+RV + +++ N   Y P+++SIGP+H G+  L  +E+ K R LN  L R+++L +E  +  V++ E+ AR CY+E
Subjt:  ESIQKLVQEIPPILEE------CSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAE

Query:  PINMDSDEFVKMMLVDGCFIVELMTTI
         I+MDS+EF +MM++DGCF++EL   +
Subjt:  PINMDSDEFVKMMLVDGCFIVELMTTI

AT3G50160.1 Plant protein of unknown function (DUF247)5.9e-2029.94Show/hide
Query:  KFDNVGMHEQNNKAGGIANIDEVEQRQCDS-------TLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR
        + +N+ + E+  +   + ++  +E +           +L + ++ L        +   IYRV   L E +  +Y PQI+SIGP+HHG + LM ME+ K R
Subjt:  KFDNVGMHEQNNKAGGIANIDEVEQRQCDS-------TLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLR

Query:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIF
         +N  + R+K   IE+ +  ++  E+ AR CY  PINM+ +EF++M+++DG FI+E+       F +       P+F
Subjt:  CLNSYLHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIF

AT3G50170.1 Plant protein of unknown function (DUF247)8.3e-2235.47Show/hide
Query:  NVGMHEQNNKAGGIANIDE-VEQRQCDSTLAESIQKLVQ----EIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSY
        NV  H+Q++   G   ++E  E+   DS +     KL Q    +   I  +  IYRV   L E ++ +Y PQ +S+GP+HHG++ L  ME+ K R LN  
Subjt:  NVGMHEQNNKAGGIANIDE-VEQRQCDSTLAESIQKLVQ----EIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSY

Query:  LHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIF
        L R K  RIE+  + +R  E+ AR CY  PI++  +EF +M+++DGCF++EL       F++       P+F
Subjt:  LHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIF

AT3G50170.2 Plant protein of unknown function (DUF247)8.3e-2235.47Show/hide
Query:  NVGMHEQNNKAGGIANIDE-VEQRQCDSTLAESIQKLVQ----EIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSY
        NV  H+Q++   G   ++E  E+   DS +     KL Q    +   I  +  IYRV   L E ++ +Y PQ +S+GP+HHG++ L  ME+ K R LN  
Subjt:  NVGMHEQNNKAGGIANIDE-VEQRQCDSTLAESIQKLVQ----EIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSY

Query:  LHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIF
        L R K  RIE+  + +R  E+ AR CY  PI++  +EF +M+++DGCF++EL       F++       P+F
Subjt:  LHRSKSLRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIF

AT4G31980.1 unknown protein3.0e-2440.46Show/hide
Query:  DEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRSWEKS
        + + Q + D+ L +SI+  +  +  +  +C IY+V  +L   N   YTP+++S GP H G+++L AME  K R L S++ R+ S  +E +V + R+WE++
Subjt:  DEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKSLRIEVIVHIVRSWEKS

Query:  ARNCYAEPINMDSDEFVKMMLVDGCFIVELM
        AR+CYAE + + SDEFV+M++VDG F+VEL+
Subjt:  ARNCYAEPINMDSDEFVKMMLVDGCFIVELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTGATAATGTTGGAATGCATGAACAAAACAACAAAGCTGGCGGTATTGCAAATATTGATGAGGTTGAACAGCGACAGTGTGATTCCACACTCGCAGAA
TCCATCCAAAAGTTGGTCCAAGAAATTCCTCCTATTTTAGAAGAATGTAGTATCTATCGGGTTTCTAGACGACTAGTTGAAAGAAACCGTGCAACTTATACGCCT
CAAATAATTTCAATCGGCCCTTTTCACCATGGAAGACAGGATTTGATGGCCATGGAACAACTTAAATTACGATGTCTCAATAGCTATCTACACCGTAGTAAAAGC
TTGAGAATTGAGGTCATTGTGCACATTGTTCGGAGTTGGGAGAAAAGTGCCCGCAATTGCTATGCAGAACCCATAAATATGGACAGTGATGAATTTGTGAAAATG
ATGCTAGTGGATGGTTGTTTCATAGTGGAGCTTATGACAACAATTTGCGGCGTTTTCTCCAAAACTCAAAATGGGTCTATTCGACCAATTTTCACTTCCTGGTTT
ATCCTTTATTGA
mRNA sequenceShow/hide mRNA sequence
TGATGAAATTTGATAATGTTGGAATGCATGAACAAAACAACAAAGCTGGCGGTATTGCAAATATTGATGAGGTTGAACAGCGACAGTGTGATTCCACACTCGCAG
AATCCATCCAAAAGTTGGTCCAAGAAATTCCTCCTATTTTAGAAGAATGTAGTATCTATCGGGTTTCTAGACGACTAGTTGAAAGAAACCGTGCAACTTATACGC
CTCAAATAATTTCAATCGGCCCTTTTCACCATGGAAGACAGGATTTGATGGCCATGGAACAACTTAAATTACGATGTCTCAATAGCTATCTACACCGTAGTAAAA
GCTTGAGAATTGAGGTCATTGTGCACATTGTTCGGAGTTGGGAGAAAAGTGCCCGCAATTGCTATGCAGAACCCATAAATATGGACAGTGATGAATTTGTGAAAA
TGATGCTAGTGGATGGTTGTTTCATAGTGGAGCTTATGACAACAATTTGCGGCGTTTTCTCCAAAACTCAAAATGGGTCTATTCGACCAATTTTCACTTCCTGGT
TTATCCTTTATTGA
Protein sequenceShow/hide protein sequence
MKFDNVGMHEQNNKAGGIANIDEVEQRQCDSTLAESIQKLVQEIPPILEECSIYRVSRRLVERNRATYTPQIISIGPFHHGRQDLMAMEQLKLRCLNSYLHRSKS
LRIEVIVHIVRSWEKSARNCYAEPINMDSDEFVKMMLVDGCFIVELMTTICGVFSKTQNGSIRPIFTSWFILY