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Lcy04g000340 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g000340
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUbiquitin
Genome locationChr04:1057413..1057571
RNA-Seq ExpressionLcy04g000340
SyntenyLcy04g000340
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0070628 - proteasome binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572305.1 hypothetical protein SDJN03_29033, partial [Cucurbita argyrosperma subsp. sororia]6.9e-1171.15Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +QIIAPPN   I+V+ SG QI+++ID+TETV SLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

KAG7011917.1 ubi, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-1069.23Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +QIIAPP    I+V+ SG QI+++ID+TETV SLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

XP_022952137.1 uncharacterized protein LOC111454902 [Cucurbita moschata]3.6e-1273.08Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +QIIAPPN   I+V+ SG QI+++ID+TETVHSLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

XP_022968884.1 uncharacterized protein LOC111468065 [Cucurbita maxima]3.6e-1273.08Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +QIIAPPN   I+V+ SG QI+++ID+TETVHSLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

XP_023554594.1 uncharacterized protein LOC111811794 [Cucurbita pepo subsp. pepo]1.8e-1169.23Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +Q+ APPN   I+V+ SG QI+++ID+TETVHSLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

TrEMBL top hitse value%identityAlignment
A0A0A0K5K6 Uncharacterized protein5.3e-0966.04Show/hide
Query:  MEDY-QFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDY QFI+EGSR+DLS +QIIAP N+  I V+ SG +I++ ID+TETVHSLK
Subjt:  MEDY-QFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

A0A5D3C719 Ubiquitin domain-containing protein8.5e-0762.96Show/hide
Query:  MEDY-QFISEGSRVDLS-FNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDY QFI+E SR+DLS  +QIIAP N+  I V+ SG +I++ ID+TETVHSLK
Subjt:  MEDY-QFISEGSRVDLS-FNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

A0A6J1C6R7 ubiquitin-like protein-NEDD8-like protein RUB32.2e-1066.1Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPP-------NKISITVKLSGLQIDMEIDETETVHSLK
        MEDY+FISEGSR+DLS NQIIAPP       +KI ITVK SG QI++E+D TETV  LK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPP-------NKISITVKLSGLQIDMEIDETETVHSLK

A0A6J1GJL4 uncharacterized protein LOC1114549021.8e-1273.08Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +QIIAPPN   I+V+ SG QI+++ID+TETVHSLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

A0A6J1I0Y4 uncharacterized protein LOC1114680651.8e-1273.08Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK
        MEDYQFISEGSR+DLS +QIIAPPN   I+V+ SG QI+++ID+TETVHSLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32350.1 Ubiquitin-like superfamily protein2.4e-0642.37Show/hide
Query:  MEDYQFISEGSRVDLSFNQIIAPPN-------KISITVKLSGLQIDMEIDETETVHSLK
        +EDY  IS G+R+DL+   +   P+       KI +TVK    Q  +E+D TETV SLK
Subjt:  MEDYQFISEGSRVDLSFNQIIAPPN-------KISITVKLSGLQIDMEIDETETVHSLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTACCAATTCATCTCAGAAGGTTCGCGAGTCGATCTCTCGTTCAATCAAATCATCGCACCGCCAAACAAGATTTCGATCACCGTGAAACTCTCCGGCCTACA
GATAGACATGGAGATCGATGAAACAGAGACGGTTCACAGTTTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTACCAATTCATCTCAGAAGGTTCGCGAGTCGATCTCTCGTTCAATCAAATCATCGCACCGCCAAACAAGATTTCGATCACCGTGAAACTCTCCGGCCTACA
GATAGACATGGAGATCGATGAAACAGAGACGGTTCACAGTTTGAAGTAG
Protein sequenceShow/hide protein sequence
MEDYQFISEGSRVDLSFNQIIAPPNKISITVKLSGLQIDMEIDETETVHSLK