; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g001030 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g001030
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationChr04:4885125..4890599
RNA-Seq ExpressionLcy04g001030
SyntenyLcy04g001030
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050616.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.0e-3664.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.0e-3664.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.0e-3664.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

TYK05741.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.0e-3664.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.0e-3664.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

TrEMBL top hitse value%identityAlignment
A0A5A7U8W5 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.8e-3764.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.8e-3764.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.8e-3764.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.8e-3764.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

A0A5D3DTE1 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.8e-3764.57Show/hide
Query:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK
        T+++T     +   YK+RR+E+++LE+ ND DRYLSD  EELND FDVL WWK+N  +Y ILSKI QD+   PVSTVASESAFSTGGR+LD FRSSL+PK
Subjt:  TSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPK

Query:  TVEAFICTQNGIRGNSMLLDVPPRLEE
        TVEA ICTQN IRG + LLD+ P LEE
Subjt:  TVEAFICTQNGIRGNSMLLDVPPRLEE

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase2.9e-1438.24Show/hide
Query:  RLFGSCSSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVST
        + + SCS S   +    +  S   T ++  DDE    NY    ++   +E  N+ D+Y+S+   + +  FD+L WW+     Y IL++I +DVL   VST
Subjt:  RLFGSCSSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVST

Query:  VASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGI
        VASESAFS GGRV+D +R+ L  + VEA ICT++ +
Subjt:  VASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGI

P08770 Putative AC transposase2.9e-1438.24Show/hide
Query:  RLFGSCSSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVST
        + + SCS S   +    +  S   T ++  DDE    NY    ++   +E  N+ D+Y+S+   + +  FD+L WW+     Y IL++I +DVL   VST
Subjt:  RLFGSCSSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVST

Query:  VASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGI
        VASESAFS GGRV+D +R+ L  + VEA ICT++ +
Subjt:  VASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.2e-1037.11Show/hide
Query:  EEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVAS-ESAFS--TGGRVLDYFRSSLTPKTVEAFICTQNGIR
        E  +S   +++ ++YL +        FD+L WWK+N  ++  LS++ +D+L  P+S V+S  S FS  TG R+LD +RSSL P+ VEA +C ++ ++
Subjt:  EEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVAS-ESAFS--TGGRVLDYFRSSLTPKTVEAFICTQNGIR

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 36.8e-1138.2Show/hide
Query:  NDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASE----SAFSTGGRVLDYFRSSLTPKTVEAFICTQNGIR
        ++ ++YL +        F++L WWK+N  ++  LSK+ +DVL  P+S V+S     SA +TG ++LD +RSSL P+TVEA  C ++ ++
Subjt:  NDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASE----SAFSTGGRVLDYFRSSLTPKTVEAFICTQNGIR

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER9.8e-1034.65Show/hide
Query:  SSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESA
        S   TTS GG   ++  ++  DT   E    N K            ++ D+YL +        FDVL WWK N  +Y  LSK+ +D+L  PVS  A +  
Subjt:  SSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESA

Query:  FSTGGRVLDYFRSSLTPKTVEAFICTQ
        F    R +D +++SL P+TVEA IC +
Subjt:  FSTGGRVLDYFRSSLTPKTVEAFICTQ

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain8.8e-0628.16Show/hide
Query:  KKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGIRGN
        +++R    S  V ++  +YLS+    +    DVL WWKVN  RY  LS + +D L    ++ A E  F   G  +D  +  +   + ++ IC ++ I   
Subjt:  KKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGIRGN

Query:  SML
          L
Subjt:  SML

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain7.0e-1134.65Show/hide
Query:  SSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESA
        S   TTS GG   ++  ++  DT   E    N K            ++ D+YL +        FDVL WWK N  +Y  LSK+ +D+L  PVS  A +  
Subjt:  SSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNGHRYRILSKIVQDVLVFPVSTVASESA

Query:  FSTGGRVLDYFRSSLTPKTVEAFICTQ
        F    R +D +++SL P+TVEA IC +
Subjt:  FSTGGRVLDYFRSSLTPKTVEAFICTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCGACCAATCGTCAGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCGACAGGTATTGGGATTCGTTATTGGCCCGATTGTGGGAG
GCTTTTTGGCTCATGTAGTAGTAGTACTACTACTAGTAGTGGTGGTGGTTCTCAACAATCAAGCTTTGTCACTAGTATAGACACTGCAGATGATGAAGATATACAGCCGA
ATTATAAGAAAAGAAGAGAAGAGGAGAGTTCATTGGAAGTGGAGAATGACTTCGATCGATATTTGTCTGACAAGAATGAGGAACTTAATGATAGTTTTGATGTTTTATAT
TGGTGGAAAGTGAATGGTCATAGATACCGCATTTTATCAAAAATTGTCCAAGATGTTTTGGTTTTTCCCGTGTCTACTGTGGCTTCTGAATCTGCATTTAGTACGGGGGG
TCGGGTCCTTGATTACTTTAGAAGTTCTTTGACTCCTAAAACGGTGGAGGCTTTCATATGTACACAAAATGGGATTCGAGGCAACTCAATGTTATTAGATGTTCCTCCAC
GACTTGAAGAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCCGACCAATCGTCAGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCGACAGGTATTGGGATTCGTTATTGGCCCGATTGTGGGAG
GCTTTTTGGCTCATGTAGTAGTAGTACTACTACTAGTAGTGGTGGTGGTTCTCAACAATCAAGCTTTGTCACTAGTATAGACACTGCAGATGATGAAGATATACAGCCGA
ATTATAAGAAAAGAAGAGAAGAGGAGAGTTCATTGGAAGTGGAGAATGACTTCGATCGATATTTGTCTGACAAGAATGAGGAACTTAATGATAGTTTTGATGTTTTATAT
TGGTGGAAAGTGAATGGTCATAGATACCGCATTTTATCAAAAATTGTCCAAGATGTTTTGGTTTTTCCCGTGTCTACTGTGGCTTCTGAATCTGCATTTAGTACGGGGGG
TCGGGTCCTTGATTACTTTAGAAGTTCTTTGACTCCTAAAACGGTGGAGGCTTTCATATGTACACAAAATGGGATTCGAGGCAACTCAATGTTATTAGATGTTCCTCCAC
GACTTGAAGAGAGTTAG
Protein sequenceShow/hide protein sequence
MIPTNRQRATTLGRRLGWQWAVAATGIGIRYWPDCGRLFGSCSSSTTTSSGGGSQQSSFVTSIDTADDEDIQPNYKKRREEESSLEVENDFDRYLSDKNEELNDSFDVLY
WWKVNGHRYRILSKIVQDVLVFPVSTVASESAFSTGGRVLDYFRSSLTPKTVEAFICTQNGIRGNSMLLDVPPRLEES