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Lcy04g001040 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g001040
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionBromo domain-containing protein
Genome locationChr04:4991137..4992219
RNA-Seq ExpressionLcy04g001040
SyntenyLcy04g001040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]8.3e-1578.69Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNVHDLERRLNESEQRLQEFE
        +G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS VHDLE  LNE E RL E E
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNVHDLERRLNESEQRLQEFE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]1.4e-1480Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ
        DGTLDMN+D+IFVQ+ GPEKH HVRGYGVGV   ELFGSSS VHDLERRLNES++
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]1.7e-1581.82Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ
        DGTLDMN+D+IFVQ+FGPEKH HVRGYGVGV   ELFGSSS VHDLERRLNES++
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ

XP_023893229.1 uncharacterized protein LOC112005206 [Quercus suber]9.2e-1444.33Show/hide
Query:  SDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNV-HDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQTMMAEMRK
        ++G L M++D++F +VFGPE+HG VRGYG G+TP +L GSSS++ HDLE+RL ESEQ+  E + +   +V++LK ++ +L++  E +   M+ + R+
Subjt:  SDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNV-HDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQTMMAEMRK

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]3.1e-3072.9Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNVHDLERRLNESEQRLQEFEQQIK-------VEVQALKDQIVELENCFEDKFQTMMAEM
        DGTLDMNEDE FV+VFGPEKHGHV GYGVGVTP ELFGSSS + D ERRLNESEQRLQEFEQQ K       +EV+ LK QI ELEN FED+FQ MMAEM
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNVHDLERRLNESEQRLQEFEQQIK-------VEVQALKDQIVELENCFEDKFQTMMAEM

Query:  RKQFANN
         K+F ++
Subjt:  RKQFANN

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968288.1e-1681.82Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ
        DGTLDMN+D+IFVQ+FGPEKH HVRGYGVGV   ELFGSSS VHDLERRLNES++
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ

A0A2N9GUC6 Uncharacterized protein2.9e-1347.25Show/hide
Query:  SDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSN-VHDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQTM
        ++G+L M+ED++FV+VFGPE+HG VRGYG GVT  +L+GSSS+ ++DLE+RL ESEQ   E   +   +V+ L++Q+++L++  E++   M
Subjt:  SDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSN-VHDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQTM

A0A2N9HCP8 Uncharacterized protein2.9e-1347.25Show/hide
Query:  SDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSN-VHDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQTM
        ++G+L M+ED++FV+VFGPE+HG VRGYG GVT  +L+GSSS+ ++DLE+RL ESEQ   E   +   +V+ L++Q+++L++  E++   M
Subjt:  SDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSN-VHDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQTM

A0A5A7U8E9 Uncharacterized protein4.0e-1578.69Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNVHDLERRLNESEQRLQEFE
        +G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS VHDLE  LNE E RL E E
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTP-ELFGSSSNVHDLERRLNESEQRLQEFE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X26.9e-1580Show/hide
Query:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ
        DGTLDMN+D+IFVQ+ GPEKH HVRGYGVGV   ELFGSSS VHDLERRLNES++
Subjt:  DGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVT-PELFGSSSNVHDLERRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTTGGGGGCCGGGTAGTGATACACCCCCGATCAATCGGAACTCAAATCATATGCTTCTCAAGTCTGATGGTACACTTGACATGAACGAGGATGAGATTTTTGT
GCAAGTTTTTGGACCAGAGAAACATGGGCATGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGCTATTTGGATCATCTTCTAATGTACATGATCTTGAGCGTCGTCTTA
ACGAGTCTGAACAACGTCTTCAAGAATTCGAACAACAAATAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATTGTTTTGAGGATAAATTTCAA
ACAATGATGGCAGAGATGCGTAAACAATTTGCTAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTTGGGGGCCGGGTAGTGATACACCCCCGATCAATCGGAACTCAAATCATATGCTTCTCAAGTCTGATGGTACACTTGACATGAACGAGGATGAGATTTTTGT
GCAAGTTTTTGGACCAGAGAAACATGGGCATGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGCTATTTGGATCATCTTCTAATGTACATGATCTTGAGCGTCGTCTTA
ACGAGTCTGAACAACGTCTTCAAGAATTCGAACAACAAATAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATTGTTTTGAGGATAAATTTCAA
ACAATGATGGCAGAGATGCGTAAACAATTTGCTAATAATTGA
Protein sequenceShow/hide protein sequence
MVLWGPGSDTPPINRNSNHMLLKSDGTLDMNEDEIFVQVFGPEKHGHVRGYGVGVTPELFGSSSNVHDLERRLNESEQRLQEFEQQIKVEVQALKDQIVELENCFEDKFQ
TMMAEMRKQFANN