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Lcy04g002080 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g002080
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMuDRA-like transposase
Genome locationChr04:12574668..12575492
RNA-Seq ExpressionLcy04g002080
SyntenyLcy04g002080
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]1.5e-1232.86Show/hide
Query:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK
        IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +FY+ SNL  +Y     PIG++     +     + + PP  K
Subjt:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK

Query:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        R  GRPK +R     E+  S +C RCG+ GHN R C  PI
Subjt:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

TYK14069.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.5e-1231.58Show/hide
Query:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM
        +EQ+ PS+R ELE                 +IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +F + SNL  M
Subjt:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM

Query:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        Y     PIGS+     +     + + PP  KR  GRPK +R     E+     C RCG+ GHN R C  PI
Subjt:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]1.5e-1232.86Show/hide
Query:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK
        IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +FY+ SNL  +Y     PIG++     +     + + PP  K
Subjt:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK

Query:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        R  GRPK +R     E+  S +C RCG+ GHN R C  PI
Subjt:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

XP_008457137.1 PREDICTED: uncharacterized protein LOC103496884 [Cucumis melo]1.5e-1231.58Show/hide
Query:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM
        +EQ+ PS+R ELE                 +IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +F + SNL  M
Subjt:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM

Query:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        Y     PIGS+     +     + + PP  KR  GRPK +R     E+     C RCG+ GHN R C  PI
Subjt:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

XP_022157216.1 uncharacterized protein LOC111023978 [Momordica charantia]1.3e-1939.29Show/hide
Query:  EIYPIDRVQFQVHDKYKQFEVNI----------------STRSCTSIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNS
        +IYP+D+  + VH+  + F VNI                 + +C +I  +GL + SFVH+FYH   LQ +YS +VHPIG + N       +   + PPN 
Subjt:  EIYPIDRVQFQVHDKYKQFEVNI----------------STRSCTSIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNS

Query:  KRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNP
        KR  GRP+ +R+    E   + +CGRC +LGHNRRRC NP
Subjt:  KRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNP

TrEMBL top hitse value%identityAlignment
A0A1S3C5H6 uncharacterized protein LOC1034968847.3e-1331.58Show/hide
Query:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM
        +EQ+ PS+R ELE                 +IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +F + SNL  M
Subjt:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM

Query:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        Y     PIGS+     +     + + PP  KR  GRPK +R     E+     C RCG+ GHN R C  PI
Subjt:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

A0A5A7T2S1 Uncharacterized protein7.3e-1332.86Show/hide
Query:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK
        IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +FY+ SNL  +Y     PIG++     +     + + PP  K
Subjt:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK

Query:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        R  GRPK +R     E+  S +C RCG+ GHN R C  PI
Subjt:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

A0A5D3CDB8 Uncharacterized protein7.3e-1332.86Show/hide
Query:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK
        IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +FY+ SNL  +Y     PIG++     +     + + PP  K
Subjt:  IYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSK

Query:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        R  GRPK +R     E+  S +C RCG+ GHN R C  PI
Subjt:  RGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

A0A5D3CUZ6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like7.3e-1331.58Show/hide
Query:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM
        +EQ+ PS+R ELE                 +IYP+D+ +F+VH + +QF VNI  R+C+                ++  + L +  +  +F + SNL  M
Subjt:  MEQIIPSIRGELE-----------------EIYPIDRVQFQVHDKYKQFEVNISTRSCT----------------SIRHKGLGIDSFVHEFYHNSNLQKM

Query:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI
        Y     PIGS+     +     + + PP  KR  GRPK +R     E+     C RCG+ GHN R C  PI
Subjt:  YSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPI

A0A6J1DXB4 uncharacterized protein LOC1110239786.2e-2039.29Show/hide
Query:  EIYPIDRVQFQVHDKYKQFEVNI----------------STRSCTSIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNS
        +IYP+D+  + VH+  + F VNI                 + +C +I  +GL + SFVH+FYH   LQ +YS +VHPIG + N       +   + PPN 
Subjt:  EIYPIDRVQFQVHDKYKQFEVNI----------------STRSCTSIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNS

Query:  KRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNP
        KR  GRP+ +R+    E   + +CGRC +LGHNRRRC NP
Subjt:  KRGVGRPKNRRIRHHSERVQSQKCGRCGQLGHNRRRCNNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAATCATTCCTTCTATTAGGGGTGAGCTTGAGGAGATATACCCTATTGATAGAGTGCAGTTCCAAGTCCATGATAAATACAAGCAATTCGAAGTAAAT
ATCAGCACCCGGAGTTGCACGTCTATTCGCCACAAGGGGTTGGGCATTGATTCATTTGTCCATGAGTTTTACCACAACTCAAACCTCCAAAAGATGTATAGTGCA
AGCGTTCATCCTATTGGATCGATGAGGAACGATTCAGTCTCAGCAACAGCCGAGGTTAACGTAGTTCACCCCCCCAATTCAAAACGTGGTGTTGGAAGGCCGAAA
AACAGGAGGATTAGGCATCATAGTGAAAGGGTGCAGTCTCAAAAGTGTGGACGGTGTGGGCAGCTAGGCCACAATCGCAGGCGATGCAACAACCCCATCACTCGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAAATCATTCCTTCTATTAGGGGTGAGCTTGAGGAGATATACCCTATTGATAGAGTGCAGTTCCAAGTCCATGATAAATACAAGCAATTCGAAGTAAAT
ATCAGCACCCGGAGTTGCACGTCTATTCGCCACAAGGGGTTGGGCATTGATTCATTTGTCCATGAGTTTTACCACAACTCAAACCTCCAAAAGATGTATAGTGCA
AGCGTTCATCCTATTGGATCGATGAGGAACGATTCAGTCTCAGCAACAGCCGAGGTTAACGTAGTTCACCCCCCCAATTCAAAACGTGGTGTTGGAAGGCCGAAA
AACAGGAGGATTAGGCATCATAGTGAAAGGGTGCAGTCTCAAAAGTGTGGACGGTGTGGGCAGCTAGGCCACAATCGCAGGCGATGCAACAACCCCATCACTCGA
TGA
Protein sequenceShow/hide protein sequence
MEQIIPSIRGELEEIYPIDRVQFQVHDKYKQFEVNISTRSCTSIRHKGLGIDSFVHEFYHNSNLQKMYSASVHPIGSMRNDSVSATAEVNVVHPPNSKRGVGRPK
NRRIRHHSERVQSQKCGRCGQLGHNRRRCNNPITR