; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g003210 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g003210
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr04:24178027..24179653
RNA-Seq ExpressionLcy04g003210
SyntenyLcy04g003210
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3485159.1 reverse transcriptase [Gossypium australe]5.9e-5129.07Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLI--DKGGWIPKG
        M FRDL+ FNKA+LAK +WR++  PD L+AKV K +YF    FL A  G      W++I   R L + G IWRIGN K V I  DPWL+  D    + + 
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLI--DKGGWIPKG

Query:  VKEVLQGKRVADILDDSG-VWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPS-KRLWNFIWNLD
        +   +Q   V  ++DDS   WKED+I     S   + ILS+P  R   +D ++W  D KGI+T+K  Y + I + +Q++++  + +   K  +  +W L 
Subjt:  VKEVLQGKRVADILDDSG-VWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPS-KRLWNFIWNLD

Query:  VWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNC----------------------------KVAKAGEDGARWTIGIMLLRF
        +  +IK+ +W+ + N +P L N+ K  + T  +C  C++ PED+ HL W+C                             +  A  D  R  + I L   
Subjt:  VWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNC----------------------------KVAKAGEDGARWTIGIMLLRF

Query:  LIIQ-KSLELAKLYGPSGTLR-IRIGGKNYQAASKSETHPSHDK---WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKM
          ++ K +   + +    T+R I+      Q + KS+  P   K   W+PP     KL+ DA +  +S S       R+ EG ++GA   +        +
Subjt:  LIIQ-KSLELAKLYGPSGTLR-IRIGGKNYQAASKSETHPSHDK---WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKM

Query:  LEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLA
         EA+A    +    D          Q + +E DS  ++  L     D      +++ + ++   +  +SFS  PR GN   + LA
Subjt:  LEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLA

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]4.8e-6130.28Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK
        + FRDL  FN+A++AK  WR+++ P+SLMA+V+K +Y+    F  AK G     +W++ILWG  + +KG  WRIG+ K+V + +D W+     + P   K
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK

Query:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR
         +     VAD++D    W+ D +   F+  D+++IL +      ++DEV+W  D KG +++K  Y LA+N    +    SN   S RLW   W LD+  +
Subjt:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR

Query:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGAR------------------------------------WTIGIM
        +KI +W+AL N LPT EN+ K      P+C  C+ + E   H+   CK A+   D A                                     W I   
Subjt:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGAR------------------------------------WTIGIM

Query:  LLRFLIIQKSLELAKLYGPSGTLRIRIGGKNYQAASK-SETHPSHD------KWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRN
          +F+   K  +   L   + ++      K YQ  SK    H + D      KWKPP     KL+ DA         G+G  +RD+EG ++  G K+ + 
Subjt:  LLRFLIIQKSLELAKLYGPSGTLRIRIGGKNYQAASK-SETHPSHD------KWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRN

Query:  KEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLAR
        +E + + EA+AI  GL+       +    S+ +L VESD  E+V LLN       E  +++ +V     +   + FS  PR  N   + LA+
Subjt:  KEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLAR

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.5e-5430.98Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK
        M FRDL +FNKA+LAK  WRI+  P+S++++VLKG+YF   +F++AK       +W++ILWGR L +KG  WRIGN   V+I  D W+ ++         
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK

Query:  EVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLA-INNENQSLASESNPSPSKRLWNFIWNLDVW
         +    RV+ ++D + G W+ D++RD F   +   ILS+P  R  ++D +IW  +  G+++++  Y +A +NN      S S+    +  WN  W + + 
Subjt:  EVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLA-INNENQSLASESNPSPSKRLWNFIWNLDVW

Query:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRFLIIQKSLEL---------------------
         +IK+ +W+   + LPT  N+ K GV     C+FC    EDS HLFW CK A+A    +++     L  FLI+++S E                      
Subjt:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRFLIIQKSLEL---------------------

Query:  AKLYGPSGTLRIRIGGKNYQAASK---------------SETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIK
        A+ +  S     +IG +  + A+K                 T+ +   W+PPD   +K++ DA +       G+G  I +  G ++ A  K + N +++ 
Subjt:  AKLYGPSGTLRIRIGGKNYQAASK---------------SETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIK

Query:  MLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIV
        M EA A  EGL+  ++      +  + ALE  S++ EIV
Subjt:  MLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIV

XP_023914298.1 uncharacterized protein LOC112025844 [Quercus suber]3.5e-5130Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWL-IDKGGWIPKGV
        M F++L  FN AMLAK  WR++++ DSL  K  K K+F  G+ L AKEG  +F  WK+IL GR++  KG  WR+GN   + I +D WL   +   +   +
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWL-IDKGGWIPKGV

Query:  KEVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVW
          +    RV+ ++D D   W E +I + FL SD   I ++P +    DD V W  +P GIF++K  Y L + +E     + S+ S SK++W  IW+L + 
Subjt:  KEVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVW

Query:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNC-------KVAKAGEDGARWTIGIMLLRFLIIQKSLELAKLYGPSGTL----
         R+K  +W+A  ++LPT  N+RK  +     C  C    E S H  W+C       KV         W    +L  F +  +S +L  L+    +L    
Subjt:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNC-------KVAKAGEDGARWTIGIMLLRFLIIQKSLELAKLYGPSGTL----

Query:  --RIRIGG----------------KNYQAAS----KSETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLE
          ++R+G                 + ++ AS    +S    S  KW PP     K++ D   F +    G+G  IR+ +G ++ A  + I    +++M+E
Subjt:  --RIRIGG----------------KNYQAAS----KSETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLE

Query:  AKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLARATAHFGNL-VFFVDTP
          A R  +    +      L+ ++ L VE DS  I+N LN           ++ ++         ISFS   R+GN L + LAR   +F    V+  D P
Subjt:  AKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLARATAHFGNL-VFFVDTP

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.8e-5528.77Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK
        M FRDL+ FN+A++AK  WRI++ P SL+A+VLK +YF    F+ A  G K   VW++I+WGR +  KG  WRIGN + V +  + W+     + P    
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK

Query:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR
         +     VA+++D+   W+EDLI   F   D ++I+ +P  + PK+D++IW  D KG +++K  Y +A+  +     S SN    + LW FIW L +  +
Subjt:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR

Query:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK-------------------------------AGEDGAR-----WTIGIM
        +KI +W+A ++ LPT EN+ K  V   PMC  C    E   H    C  A+                               A  +GA      W I   
Subjt:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK-------------------------------AGEDGAR-----WTIGIM

Query:  LLRFLIIQKSLELAKLYGPSGTL-----RIRIGGKNYQAASKSETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKE
          ++L   K     ++   +  +     +IR     Y+    +E      +W PP     K++ DA    ++   G+G  +RDS+G+   A  K +R   
Subjt:  LLRFLIIQKSLELAKLYGPSGTL-----RIRIGGKNYQAASKSETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKE

Query:  AIKMLEAKAIREGLEKLTDRVRLG-GLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLARATAHFGNLV
        ++ M EA A+  GL K+ ++  +  G+        ESDS E+++L+N+K+  L E  +++ ++ E +           PR  N+  + LA+        V
Subjt:  AIKMLEAKAIREGLEKLTDRVRLG-GLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLARATAHFGNLV

Query:  FFVD
         ++D
Subjt:  FFVD

TrEMBL top hitse value%identityAlignment
A0A1S8AC01 Ribonuclease H-like superfamily protein1.4e-5330.06Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK
        + F+D + FN+A++AK  WR+++ PDSL A+VL+ KYF    FL AK G     +W++I+WGR +   G  WRIG   +V I +  W+     + P    
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK

Query:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR
         + +   V+ ++DD   W E  I   F   D D I+SMP  R PKDD+++W  D KG +++K  Y +A+  +  +L S S  + ++  W  IW LD+  +
Subjt:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR

Query:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK---------------AGEDGARWTIGIMLLRFLIIQKSLELA-----KL
        ++I +W+A  N LP+ EN+ K  V   P+C  C++  E   H   NCK A+               AGED      G +  R    +  +EL       +
Subjt:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK---------------AGEDGARWTIGIMLLRFLIIQKSLELA-----KL

Query:  YGPSGTLRIRIGGKNYQ-AASKSE--------TH---PSH---------DKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKE
        +        ++  ++ Q   +K+E        TH   P H           W PP A  +KL+ DA    D  + G+G  IR++EG ++ A     +   
Subjt:  YGPSGTLRIRIGGKNYQ-AASKSE--------TH---PSH---------DKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKE

Query:  AIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPR
         +  +EA+A+  GL+       + G     +L VE+DS E+V+ +N K   + E  +VV  +  L+   N I     PR
Subjt:  AIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPR

A0A1S8ACU2 Ribonuclease H-like superfamily protein5.2e-5328.95Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK
        + FRD+  FN+A++AK SWRIIK P+SLMAK+L+ KYF G  FL+AK G K   VW++I+WGR +   G  WRIG   +V I +  W+     + P    
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK

Query:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR
         +     VA+++D++  WKE LI+  F   D + I  +     PK D+++W  D KG +++K  Y +A+  ++ +  S S+ +  +  WN IW+L++  +
Subjt:  EVLQGKRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPR

Query:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIG--------------IMLLRFLIIQKS-----LELAKLY
        IKI +WKA  N LPT EN+ +  +   P+C  C+ K ED  H    CK AK       W +               + +L+ L+ ++S     L +A  +
Subjt:  IKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIG--------------IMLLRFLIIQKS-----LELAKLY

Query:  GPSGTLRI-------------------------RIGGKNYQAASKSETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIR
            T  I                         R+     QAA+K+       KW PP   H+K + DA    + +  G+G  IRD  G++I A     +
Subjt:  GPSGTLRI-------------------------RIGGKNYQAASKSETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIR

Query:  NKEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMN-VISFSSCPRVGNFLEYCLAR
            +   EA A+  GL+ + +        S   L +E+D  ++V+ +        E  + + E+ + +   N ++      R  N + + LA+
Subjt:  NKEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMN-VISFSSCPRVGNFLEYCLAR

A0A2N9FFZ2 Reverse transcriptase domain-containing protein1.3e-5129.18Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLID-KGGWIPKGV
        M  RDL  FN+A+LAK  WR++ +P SL +KV K KYF   + L+A++  +    WK+I+  R L  KG +WR+G    + I +D WL D     I    
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLID-KGGWIPKGV

Query:  KEVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVW
           +    V  ++D +   WK +L++  FL  +   IL +P +     D ++W     G +T++  YHL +N  +Q   S S+ +   +LW+ IW+L V 
Subjt:  KEVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVW

Query:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRF-----LIIQKSLELAKLYGPSGTLRIRIGG
        P+I+  +W+A +N+LPT  N+    +  +P C  C ++ E + H  W CK  K       W   +  + +     LI+Q+ ++      P     +    
Subjt:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRF-----LIIQKSLELAKLYGPSGTLRIRIGG

Query:  KNYQAASKSETHPS----HDK---WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGGLR
          +Q A  S+  PS    H K   WKPP+   +K++ D   F + +  GVG  IR+  G ++G+   +I    +++ +EA A    ++   D   LG + 
Subjt:  KNYQAASKSETHPS----HDK---WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGGLR

Query:  SNQALEVESDSPEIVNLLNEKAEDLPETTF---VVEEVLELVGKMNVISFSSCPRVGNFLEYCLAR
            +++E DS  IV  L  KA   P TT    V+E++ +    +  + F    R GN + + LA+
Subjt:  SNQALEVESDSPEIVNLLNEKAEDLPETTF---VVEEVLELVGKMNVISFSSCPRVGNFLEYCLAR

A0A5B6WTC7 Reverse transcriptase2.9e-5129.07Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLI--DKGGWIPKG
        M FRDL+ FNKA+LAK +WR++  PD L+AKV K +YF    FL A  G      W++I   R L + G IWRIGN K V I  DPWL+  D    + + 
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLI--DKGGWIPKG

Query:  VKEVLQGKRVADILDDSG-VWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPS-KRLWNFIWNLD
        +   +Q   V  ++DDS   WKED+I     S   + ILS+P  R   +D ++W  D KGI+T+K  Y + I + +Q++++  + +   K  +  +W L 
Subjt:  VKEVLQGKRVADILDDSG-VWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPS-KRLWNFIWNLD

Query:  VWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNC----------------------------KVAKAGEDGARWTIGIMLLRF
        +  +IK+ +W+ + N +P L N+ K  + T  +C  C++ PED+ HL W+C                             +  A  D  R  + I L   
Subjt:  VWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNC----------------------------KVAKAGEDGARWTIGIMLLRF

Query:  LIIQ-KSLELAKLYGPSGTLR-IRIGGKNYQAASKSETHPSHDK---WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKM
          ++ K +   + +    T+R I+      Q + KS+  P   K   W+PP     KL+ DA +  +S S       R+ EG ++GA   +        +
Subjt:  LIIQ-KSLELAKLYGPSGTLR-IRIGGKNYQAASKSETHPSHDK---WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKM

Query:  LEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLA
         EA+A    +    D          Q + +E DS  ++  L     D      +++ + ++   +  +SFS  PR GN   + LA
Subjt:  LEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLA

A0A6J1DAR4 uncharacterized protein LOC1110189547.3e-5530.98Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK
        M FRDL +FNKA+LAK  WRI+  P+S++++VLKG+YF   +F++AK       +W++ILWGR L +KG  WRIGN   V+I  D W+ ++         
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVK

Query:  EVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLA-INNENQSLASESNPSPSKRLWNFIWNLDVW
         +    RV+ ++D + G W+ D++RD F   +   ILS+P  R  ++D +IW  +  G+++++  Y +A +NN      S S+    +  WN  W + + 
Subjt:  EVLQGKRVADILD-DSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLA-INNENQSLASESNPSPSKRLWNFIWNLDVW

Query:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRFLIIQKSLEL---------------------
         +IK+ +W+   + LPT  N+ K GV     C+FC    EDS HLFW CK A+A    +++     L  FLI+++S E                      
Subjt:  PRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRFLIIQKSLEL---------------------

Query:  AKLYGPSGTLRIRIGGKNYQAASK---------------SETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIK
        A+ +  S     +IG +  + A+K                 T+ +   W+PPD   +K++ DA +       G+G  I +  G ++ A  K + N +++ 
Subjt:  AKLYGPSGTLRIRIGGKNYQAASK---------------SETHPSHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIK

Query:  MLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIV
        M EA A  EGL+  ++      +  + ALE  S++ EIV
Subjt:  MLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIV

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.2e-1134.07Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDK
        + FRDL  FN+A+LAK S+RII  P +L++++L+ +YF   + ++   G +    W++I+ GR L  +G +  IG+     +  D W++D+
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDK

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.5e-2323.23Show/hide
Query:  LKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVKEVLQGKRVADILDDSG---VWKEDLIRDAFLS
        +K +YF   + L AK   +    W ++L G +L +KG    IG+ + + I  D  ++D     P   +E  +   + ++ +  G    W +  I      
Subjt:  LKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVKEVLQGKRVADILDDSG---VWKEDLIRDAFLS

Query:  SDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPM
        SD   I  +   +  K D++IW  +  G +T++  Y L  ++ + ++ + + P  S  L   IWNL + P++K  +W+AL+ AL T E +   G+  +P 
Subjt:  SDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPM

Query:  CWFCRSKPEDSEHLFWNCKVAKAG---EDGARWTIGIM----------LLRFLIIQKSLELAKLYGPSGTLRI------------RIGGKNYQAASKSET
        C  C  + E   H  + C  A       D +     +M          +L F+      +  KL       RI            R        ++K+ET
Subjt:  CWFCRSKPEDSEHLFWNCKVAKAG---EDGARWTIGIM----------LLRFLIIQKSLELAKLYGPSGTLRI------------RIGGKNYQAASKSET

Query:  H------PSHDK--------------WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGG
        H       SH K              W+ P AT+ K + DA +         GW IR+  G+ I  G  K+ +       E KA+   L++         
Subjt:  H------PSHDK--------------WKPPDATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGG

Query:  LRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLAR
        +R    + +E D   ++NL+N  +         +E++     K   I F    R GN L + LA+
Subjt:  LRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFLEYCLAR

AT3G25270.1 Ribonuclease H-like superfamily protein1.7e-0836.49Show/hide
Query:  ESNPSPSK-RLWNFIWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK
        E  P P K  +   IW L   P+IK  +WK L+ AL T +N+++  +  +P C  C  + E S+HLF++C  A+
Subjt:  ESNPSPSK-RLWNFIWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.0e-0841.67Show/hide
Query:  IWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK
        IW+L + P+IK+ IWKALNNALP    +    ++  P C  CR   E   H+ +NC  A+
Subjt:  IWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAK

AT4G29090.1 Ribonuclease H-like superfamily protein7.5e-3624.76Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWI-----
        + F+D+  FN A+L K  WR++  P+SLMAKV K +YF     L A  G +   VWK+I   + +  +G    +GN + + I +  WL  K         
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWI-----

Query:  ---PKGVKEVLQGKRVADILDDSG-VWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHL--AINNENQSLASESNPSPSKRLW
           P+    V    +V+D++D+SG  W++D+I   F   +   I  +        D   W     G +T+K  Y +   I N+  S    S PS +  ++
Subjt:  ---PKGVKEVLQGKRVADILDDSG-VWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHL--AINNENQSLASESNPSPSKRLW

Query:  NFIWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAG--------EDGARWTIGIMLLRFLII---------Q
          IW     P+I+  +WK L+N+LP    +    ++    C  C S  E   HL + C  A+            G  W   I +  + +          +
Subjt:  NFIWNLDVWPRIKITIWKALNNALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAG--------EDGARWTIGIMLLRFLII---------Q

Query:  KSLELA-----KLYGPSGTLRIRIGGKNYQA-------------------ASKSETHP-----SHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDS
        K+ +L      +L+     L  R  G+ + A                   A    T P     S  +W+PP     K + DA W  D+   G+GW +R+ 
Subjt:  KSLELA-----KLYGPSGTLRIRIGGKNYQA-------------------ASKSETHP-----SHDKWKPPDATHWKLDADAVWFDDSHSDGVGWAIRDS

Query:  EGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFL
        +G +   G + +   +++   E +A+R  +      + L   + N  +  ESDS  ++ +LN   E  P     ++++  L+ +   + F   PR GN L
Subjt:  EGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEEVLELVGKMNVISFSSCPRVGNFL

Query:  EYCLARATAHFGN
           +AR +  F N
Subjt:  EYCLARATAHFGN

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.9e-1334.07Show/hide
Query:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDK
        + FRDL  FN+A+LAK S+RII  P +L++++L+ +YF   + ++   G +    W++I+ GR L  +G +  IG+     +  D W++D+
Subjt:  MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTAGAGACCTAGCTATGTTTAACAAGGCCATGTTAGCAAAGCTAAGTTGGAGAATCATTAAATCCCCTGATAGCCTTATGGCTAAAGTCCTCAAAGGC
AAATATTTCAGCGGAGGGGCTTTCCTAAAGGCCAAAGAGGGCTGCAAAGCTTTTATCGTGTGGAAAAACATATTATGGGGCAGATCTCTATTTGAAAAAGGCTAC
ATATGGAGGATTGGTAACGACAAACAAGTATATATCGACCAAGATCCATGGTTGATAGACAAAGGGGGCTGGATTCCTAAAGGAGTTAAGGAGGTACTTCAAGGA
AAAAGAGTGGCCGACATTTTAGATGATAGTGGAGTCTGGAAGGAAGATCTCATAAGAGACGCCTTTCTCTCAAGTGATGTTGACTCCATTCTGAGTATGCCAAGG
AATAGAATCCCTAAAGATGACGAAGTAATCTGGGGAACGGACCCTAAAGGAATCTTTACAATAAAAGGGGCTTATCATCTTGCTATCAATAATGAAAATCAATCA
TTAGCCTCCGAATCGAACCCTTCCCCATCCAAAAGGTTGTGGAATTTTATATGGAATCTGGATGTCTGGCCTAGAATTAAAATCACAATTTGGAAAGCTCTCAAC
AACGCACTCCCCACTCTTGAGAATATTAGAAAACTAGGGGTTAATACTAATCCGATGTGTTGGTTTTGCAGGTCGAAGCCAGAGGACTCGGAGCATCTTTTCTGG
AATTGCAAAGTTGCTAAAGCGGGGGAGGATGGAGCTCGGTGGACTATTGGGATCATGCTACTGAGATTCTTGATAATTCAAAAATCACTAGAGCTGGCCAAATTA
TATGGTCCATCTGGAACACTAAGAATCAGAATAGGGGGGAAAAATTACCAAGCAGCTAGCAAGTCGGAGACCCACCCTAGTCACGACAAATGGAAGCCGCCAGAT
GCCACCCATTGGAAGCTCGATGCAGATGCGGTGTGGTTCGATGATTCACATTCCGACGGCGTTGGGTGGGCCATTCGTGACTCAGAAGGTTCTCTGATAGGAGCG
GGCTGCAAGAAGATCAGGAATAAGGAAGCCATAAAGATGCTCGAAGCTAAAGCCATTAGAGAAGGGTTGGAAAAGCTTACCGATCGTGTCAGGCTCGGTGGGCTT
AGGAGTAATCAAGCGCTGGAGGTCGAGTCGGATTCGCCTGAAATCGTGAACCTCCTTAACGAAAAGGCAGAGGACCTGCCGGAGACGACCTTTGTGGTCGAAGAG
GTGCTGGAGCTGGTCGGAAAGATGAACGTCATCTCCTTCTCCTCGTGCCCAAGAGTGGGCAATTTTTTGGAGTACTGTCTTGCGCGCGCAACTGCACATTTTGGG
AATTTAGTTTTTTTTGTCGATACACCATCTCAGTGCTTGAGAAGGGATATTGCAGGGGGCTTATTTGATGCCGCTGATTGGTTTGCCTCGGTTTTAAGAGGCTGT
GATGGAATTTCTGACTTTAATCCGTCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTAGAGACCTAGCTATGTTTAACAAGGCCATGTTAGCAAAGCTAAGTTGGAGAATCATTAAATCCCCTGATAGCCTTATGGCTAAAGTCCTCAAAGGC
AAATATTTCAGCGGAGGGGCTTTCCTAAAGGCCAAAGAGGGCTGCAAAGCTTTTATCGTGTGGAAAAACATATTATGGGGCAGATCTCTATTTGAAAAAGGCTAC
ATATGGAGGATTGGTAACGACAAACAAGTATATATCGACCAAGATCCATGGTTGATAGACAAAGGGGGCTGGATTCCTAAAGGAGTTAAGGAGGTACTTCAAGGA
AAAAGAGTGGCCGACATTTTAGATGATAGTGGAGTCTGGAAGGAAGATCTCATAAGAGACGCCTTTCTCTCAAGTGATGTTGACTCCATTCTGAGTATGCCAAGG
AATAGAATCCCTAAAGATGACGAAGTAATCTGGGGAACGGACCCTAAAGGAATCTTTACAATAAAAGGGGCTTATCATCTTGCTATCAATAATGAAAATCAATCA
TTAGCCTCCGAATCGAACCCTTCCCCATCCAAAAGGTTGTGGAATTTTATATGGAATCTGGATGTCTGGCCTAGAATTAAAATCACAATTTGGAAAGCTCTCAAC
AACGCACTCCCCACTCTTGAGAATATTAGAAAACTAGGGGTTAATACTAATCCGATGTGTTGGTTTTGCAGGTCGAAGCCAGAGGACTCGGAGCATCTTTTCTGG
AATTGCAAAGTTGCTAAAGCGGGGGAGGATGGAGCTCGGTGGACTATTGGGATCATGCTACTGAGATTCTTGATAATTCAAAAATCACTAGAGCTGGCCAAATTA
TATGGTCCATCTGGAACACTAAGAATCAGAATAGGGGGGAAAAATTACCAAGCAGCTAGCAAGTCGGAGACCCACCCTAGTCACGACAAATGGAAGCCGCCAGAT
GCCACCCATTGGAAGCTCGATGCAGATGCGGTGTGGTTCGATGATTCACATTCCGACGGCGTTGGGTGGGCCATTCGTGACTCAGAAGGTTCTCTGATAGGAGCG
GGCTGCAAGAAGATCAGGAATAAGGAAGCCATAAAGATGCTCGAAGCTAAAGCCATTAGAGAAGGGTTGGAAAAGCTTACCGATCGTGTCAGGCTCGGTGGGCTT
AGGAGTAATCAAGCGCTGGAGGTCGAGTCGGATTCGCCTGAAATCGTGAACCTCCTTAACGAAAAGGCAGAGGACCTGCCGGAGACGACCTTTGTGGTCGAAGAG
GTGCTGGAGCTGGTCGGAAAGATGAACGTCATCTCCTTCTCCTCGTGCCCAAGAGTGGGCAATTTTTTGGAGTACTGTCTTGCGCGCGCAACTGCACATTTTGGG
AATTTAGTTTTTTTTGTCGATACACCATCTCAGTGCTTGAGAAGGGATATTGCAGGGGGCTTATTTGATGCCGCTGATTGGTTTGCCTCGGTTTTAAGAGGCTGT
GATGGAATTTCTGACTTTAATCCGTCTATTTAA
Protein sequenceShow/hide protein sequence
MSFRDLAMFNKAMLAKLSWRIIKSPDSLMAKVLKGKYFSGGAFLKAKEGCKAFIVWKNILWGRSLFEKGYIWRIGNDKQVYIDQDPWLIDKGGWIPKGVKEVLQG
KRVADILDDSGVWKEDLIRDAFLSSDVDSILSMPRNRIPKDDEVIWGTDPKGIFTIKGAYHLAINNENQSLASESNPSPSKRLWNFIWNLDVWPRIKITIWKALN
NALPTLENIRKLGVNTNPMCWFCRSKPEDSEHLFWNCKVAKAGEDGARWTIGIMLLRFLIIQKSLELAKLYGPSGTLRIRIGGKNYQAASKSETHPSHDKWKPPD
ATHWKLDADAVWFDDSHSDGVGWAIRDSEGSLIGAGCKKIRNKEAIKMLEAKAIREGLEKLTDRVRLGGLRSNQALEVESDSPEIVNLLNEKAEDLPETTFVVEE
VLELVGKMNVISFSSCPRVGNFLEYCLARATAHFGNLVFFVDTPSQCLRRDIAGGLFDAADWFASVLRGCDGISDFNPSI