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Lcy04g003300 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g003300
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationChr04:24560897..24562409
RNA-Seq ExpressionLcy04g003300
SyntenyLcy04g003300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.1e-3055.47Show/hide
Query:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV
        K F+IV+F+H M+ LESSAP I ++L  IGFAKWS A+ PR+RY VMTTNIS+S N  + K +EL I SMLEV+R + Q WF+E++N+ DYQV    K++
Subjt:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV

Query:  ELKLRELIEQDRSMQVHPVKNHLYQVID
        E  LR+ IE+ RSM+V+ V N  YQ ID
Subjt:  ELKLRELIEQDRSMQVHPVKNHLYQVID

KAA0062727.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.5e-3058.14Show/hide
Query:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV
        KAF+IVDFEH M  LESSA  I + + SIGFAK S  +  R+RY  MTTNISKS N  + K REL I SMLE++R + QRWF+E++N+ADYQV    K++
Subjt:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV

Query:  ELKLRELIEQDRSMQVHPVKNHLYQVIDG
        E  LRE IE  RSM+V+PV    YQVIDG
Subjt:  ELKLRELIEQDRSMQVHPVKNHLYQVIDG

TYK26962.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.1e-3055.47Show/hide
Query:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV
        K F+IV+F+H M+ LESSAP I ++L  IGFAKWS A+ PR+RY VMTTNIS+S N  + K +EL I SMLEV+R + Q WF+E++N+ DYQV    K++
Subjt:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV

Query:  ELKLRELIEQDRSMQVHPVKNHLYQVID
        E  LR+ IE+ RSM+V+ V N  YQ ID
Subjt:  ELKLRELIEQDRSMQVHPVKNHLYQVID

XP_008464022.1 PREDICTED: uncharacterized protein LOC103502005 [Cucumis melo]7.4e-3051.63Show/hide
Query:  TLDANDQIFPLA--------------------------------KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFN
        TLDANDQIFPLA                                KAF+IV+FEH M  LESSAP I ++L SIGFAKWS A+ PR+RY VMTTNIS+S N
Subjt:  TLDANDQIFPLA--------------------------------KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFN

Query:  FVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSVELKLRELIE
         V+ K  EL I SMLE +R + QRWF+E++ND DYQV    K++E  LRE IE
Subjt:  FVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSVELKLRELIE

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]8.4e-3454.74Show/hide
Query:  ANDQIFPLAKAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADY
        +++  FP AKA+++ DFE NM+ L+S+   I ++L+ IGF+KWSCAF    RY  MTTNIS+S N  +K  REL ITSMLEV+R + QRWFYE+KN AD+
Subjt:  ANDQIFPLAKAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADY

Query:  QVIYLAKSVELKLRELIEQDRSMQVHPVKNHLYQVID
        Q+    KSVE KLRE I   R+M V+ V N +YQVID
Subjt:  QVIYLAKSVELKLRELIEQDRSMQVHPVKNHLYQVID

TrEMBL top hitse value%identityAlignment
A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like5.5e-3155.47Show/hide
Query:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV
        K F+IV+F+H M+ LESSAP I ++L  IGFAKWS A+ PR+RY VMTTNIS+S N  + K +EL I SMLEV+R + Q WF+E++N+ DYQV    K++
Subjt:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV

Query:  ELKLRELIEQDRSMQVHPVKNHLYQVID
        E  LR+ IE+ RSM+V+ V N  YQ ID
Subjt:  ELKLRELIEQDRSMQVHPVKNHLYQVID

A0A5A7V6U1 Protein FAR1-RELATED SEQUENCE 3-like1.2e-3058.14Show/hide
Query:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV
        KAF+IVDFEH M  LESSA  I + + SIGFAK S  +  R+RY  MTTNISKS N  + K REL I SMLE++R + QRWF+E++N+ADYQV    K++
Subjt:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV

Query:  ELKLRELIEQDRSMQVHPVKNHLYQVIDG
        E  LRE IE  RSM+V+PV    YQVIDG
Subjt:  ELKLRELIEQDRSMQVHPVKNHLYQVIDG

A0A5A7VBR6 Protein FAR1-RELATED SEQUENCE 3-like3.6e-3051.63Show/hide
Query:  TLDANDQIFPLA--------------------------------KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFN
        TLDANDQIFPLA                                KAF+IV+FEH M  LESSAP I ++L SIGFAKWS A+ PR+RY VMTTNIS+S N
Subjt:  TLDANDQIFPLA--------------------------------KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFN

Query:  FVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSVELKLRELIE
         V+ K  EL I SMLE +R + QRWF+E++ND DYQV    K++E  LRE IE
Subjt:  FVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSVELKLRELIE

A0A5D3DTY1 Protein FAR1-RELATED SEQUENCE 3-like5.5e-3155.47Show/hide
Query:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV
        K F+IV+F+H M+ LESSAP I ++L  IGFAKWS A+ PR+RY VMTTNIS+S N  + K +EL I SMLEV+R + Q WF+E++N+ DYQV    K++
Subjt:  KAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSV

Query:  ELKLRELIEQDRSMQVHPVKNHLYQVID
        E  LR+ IE+ RSM+V+ V N  YQ ID
Subjt:  ELKLRELIEQDRSMQVHPVKNHLYQVID

A0A6J1C328 uncharacterized protein LOC1110069944.1e-3454.74Show/hide
Query:  ANDQIFPLAKAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADY
        +++  FP AKA+++ DFE NM+ L+S+   I ++L+ IGF+KWSCAF    RY  MTTNIS+S N  +K  REL ITSMLEV+R + QRWFYE+KN AD+
Subjt:  ANDQIFPLAKAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVRELSITSMLEVIRRLSQRWFYEQKNDADY

Query:  QVIYLAKSVELKLRELIEQDRSMQVHPVKNHLYQVID
        Q+    KSVE KLRE I   R+M V+ V N +YQVID
Subjt:  QVIYLAKSVELKLRELIEQDRSMQVHPVKNHLYQVID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATTACTGGAAGCGAATTGAAAACACCTAAAGATATTGTTTCGTTCATTCGCTTTGAACATGACATTCACATAACTTGTACTTTGGATGCGAACGATCAA
ATATTTCCCCTAGCTAAGGCTTTCGATATTGTTGATTTTGAACATAACATGCAACAGTTAGAAAGTTCTGCTCCAAGTATTCATGATGATTTGAATTCGATAGGT
TTTGCAAAATGGTCTTGTGCCTTTTGTCCTCGTCAAAGATATACAGTTATGACCACTAATATATCTAAAAGTTTTAACTTCGTTGTCAAAAAAGTTAGAGAGCTG
TCGATAACTTCAATGTTAGAAGTAATAAGGAGGCTTTCGCAGAGGTGGTTTTATGAACAGAAAAATGATGCAGACTACCAGGTTATTTATTTGGCCAAATCAGTT
GAGCTAAAATTACGTGAGTTGATTGAGCAGGACCGTTCAATGCAGGTACACCCAGTTAAAAATCATTTGTATCAAGTCATTGATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATTACTGGAAGCGAATTGAAAACACCTAAAGATATTGTTTCGTTCATTCGCTTTGAACATGACATTCACATAACTTGTACTTTGGATGCGAACGATCAA
ATATTTCCCCTAGCTAAGGCTTTCGATATTGTTGATTTTGAACATAACATGCAACAGTTAGAAAGTTCTGCTCCAAGTATTCATGATGATTTGAATTCGATAGGT
TTTGCAAAATGGTCTTGTGCCTTTTGTCCTCGTCAAAGATATACAGTTATGACCACTAATATATCTAAAAGTTTTAACTTCGTTGTCAAAAAAGTTAGAGAGCTG
TCGATAACTTCAATGTTAGAAGTAATAAGGAGGCTTTCGCAGAGGTGGTTTTATGAACAGAAAAATGATGCAGACTACCAGGTTATTTATTTGGCCAAATCAGTT
GAGCTAAAATTACGTGAGTTGATTGAGCAGGACCGTTCAATGCAGGTACACCCAGTTAAAAATCATTTGTATCAAGTCATTGATGGTTAA
Protein sequenceShow/hide protein sequence
MNITGSELKTPKDIVSFIRFEHDIHITCTLDANDQIFPLAKAFDIVDFEHNMQQLESSAPSIHDDLNSIGFAKWSCAFCPRQRYTVMTTNISKSFNFVVKKVREL
SITSMLEVIRRLSQRWFYEQKNDADYQVIYLAKSVELKLRELIEQDRSMQVHPVKNHLYQVIDG