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Lcy04g003380 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g003380
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein Ycf2-like
Genome locationChr04:24920075..24920558
RNA-Seq ExpressionLcy04g003380
SyntenyLcy04g003380
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]2.6e-3860.16Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        +HIIM+DD+++F+GYPW R+AF+LLV+FM + + SKG TGI MGGFIFPILAWAYEV+  LS P NFF  +I++ + RI+N   DTQPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]7.5e-3859.38Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        ++IIM+DD+++F+GYPW R+AF+LLV+FM +A+ SKG TGI + GFIFPILAWAYEV+  LS P NFFA +I++ + RI+NW  D QPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]5.2e-3962.02Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYM-GGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFE
        +HIIM+DD+++F+GYPW R+AF+LLV+FM +A+ SKG TGI M GGFIFPILAWAYEV+  LS P NFFA +I++ + RI+NW  DTQPKWKDL++KVF+
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYM-GGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFE

Query:  SRELEVIPMIAIDVEMEMDYFQPFMEEEK
        S  LEV PM+A   E+ M +F PF E EK
Subjt:  SRELEVIPMIAIDVEMEMDYFQPFMEEEK

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]7.5e-3859.38Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        ++IIM+DD+++F+GYPW R+AF+LLV+FM +A+ SKG TGI + GFIFPILAWAYEV+  LS P NFFA +I++ + RI+NW  D QPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]8.3e-3759.38Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        +HIIM+DD+++F+GYPW R+AF+LLV+FM + + SKG TGI + GFIF ILAWAYEV   LS P NFFA +I + + RI+NW  DTQPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like1.2e-3860.16Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        +HIIM+DD+++F+GYPW R+AF+LLV+FM + + SKG TGI MGGFIFPILAWAYEV+  LS P NFF  +I++ + RI+N   DTQPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

A0A5A7U6E1 Protein Ycf2-like4.0e-3759.38Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        +HIIM+DD+++F+GYPW R+AF+LLV+FM + + SKG TGI + GFIF ILAWAYEV   LS P NFFA +I + + RI+NW  DTQPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

A0A5A7UD30 Protein Ycf2-like3.6e-3859.38Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        ++IIM+DD+++F+GYPW R+AF+LLV+FM +A+ SKG TGI + GFIFPILAWAYEV+  LS P NFFA +I++ + RI+NW  D QPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

A0A5D3CEX9 Protein Ycf2-like2.5e-3962.02Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYM-GGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFE
        +HIIM+DD+++F+GYPW R+AF+LLV+FM +A+ SKG TGI M GGFIFPILAWAYEV+  LS P NFFA +I++ + RI+NW  DTQPKWKDL++KVF+
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYM-GGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFE

Query:  SRELEVIPMIAIDVEMEMDYFQPFMEEEK
        S  LEV PM+A   E+ M +F PF E EK
Subjt:  SRELEVIPMIAIDVEMEMDYFQPFMEEEK

A0A5D3DCN3 Protein Ycf2-like3.6e-3859.38Show/hide
Query:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES
        ++IIM+DD+++F+GYPW R+AF+LLV+FM +A+ SKG TGI + GFIFPILAWAYEV+  LS P NFFA +I++ + RI+NW  D QPKWKDL++KVF+S
Subjt:  NHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFES

Query:  RELEVIPMIAIDVEMEMDYFQPFMEEEK
          LEV PM+A   E+ M +F PF+E EK
Subjt:  RELEVIPMIAIDVEMEMDYFQPFMEEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATATAATCATGATTGACGATGAGAAACTATTTAATGGGTATCCATGGAGAAGGTTAGCATTCGACTTATTGGTTGAATTCATGCAAAAAGCCTTGAAG
AGCAAGGGGGCCACGGGAATATATATGGGTGGCTTCATATTCCCCATATTAGCATGGGCTTATGAAGTGATGTCAATACTAAGTTGCCCACAAAATTTCTTTGCA
AGAAAAATCGCGGATACAATTTCAAGGATTGTCAATTGGCTGGTAGACACACAACCAAAATGGAAGGACCTAGAAAAAAAAGTATTTGAGTCAAGAGAGCTTGAA
GTAATTCCAATGATAGCTATAGATGTGGAAATGGAAATGGATTATTTCCAACCATTTATGGAGGAAGAAAAGAAGTTTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCATATAATCATGATTGACGATGAGAAACTATTTAATGGGTATCCATGGAGAAGGTTAGCATTCGACTTATTGGTTGAATTCATGCAAAAAGCCTTGAAG
AGCAAGGGGGCCACGGGAATATATATGGGTGGCTTCATATTCCCCATATTAGCATGGGCTTATGAAGTGATGTCAATACTAAGTTGCCCACAAAATTTCTTTGCA
AGAAAAATCGCGGATACAATTTCAAGGATTGTCAATTGGCTGGTAGACACACAACCAAAATGGAAGGACCTAGAAAAAAAAGTATTTGAGTCAAGAGAGCTTGAA
GTAATTCCAATGATAGCTATAGATGTGGAAATGGAAATGGATTATTTCCAACCATTTATGGAGGAAGAAAAGAAGTTTACATGA
Protein sequenceShow/hide protein sequence
MNHIIMIDDEKLFNGYPWRRLAFDLLVEFMQKALKSKGATGIYMGGFIFPILAWAYEVMSILSCPQNFFARKIADTISRIVNWLVDTQPKWKDLEKKVFESRELE
VIPMIAIDVEMEMDYFQPFMEEEKKFT