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Lcy04g004840 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g004840
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationChr04:31872642..31873028
RNA-Seq ExpressionLcy04g004840
SyntenyLcy04g004840
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]2.6e-2748.03Show/hide
Query:  KHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTL
        ++ R  LQ  +Y  R   SS  +  +++A  IL++V E+AR H +RPI R+EFEV DG    RVN++++TCTC++F YYE+PCSH IA    RNI  HTL
Subjt:  KHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTL

Query:  CSRVYHVDSLIDAYAQPIQPLGHVSEW
        CS  Y +D+LI AY +P+ PLG   +W
Subjt:  CSRVYHVDSLIDAYAQPIQPLGHVSEW
XP_038890792.1 uncharacterized protein LOC120080248 [Benincasa hispida]5.2e-2860.42Show/hide
Query:  ILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
        I+     KA +H +RPI ++EFEV DG LGGRVN+HARTCTCR+F+YYE+ CSH IAAC  RNID  + CS VY +D+++ AYA+PI+PLGH  EW
Subjt:  ILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
XP_038891632.1 uncharacterized protein LOC120081024 [Benincasa hispida]8.3e-2646.88Show/hide
Query:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT
        ++H+RG LQ+ +Y+ RN  +S  +  S +  T L    +K RR+ +  I  Y   V +  L G +NLH + CTC+EFE   +PCSH I A   RNI  H 
Subjt:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT

Query:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
        LCSR Y VDSL+ AYA+PI PLGH+SEW
Subjt:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
XP_038895917.1 uncharacterized protein LOC120084090 [Benincasa hispida]3.7e-2653.21Show/hide
Query:  SSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPI
        S++ S+ S +A TI     +KA RH +RPI ++EFE+ DG L GR N+H R CTC +F+YYE+PCSHVIAAC  +NID  +LCS VY ++S++ AYA+PI
Subjt:  SSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPI

Query:  QPLGHVSEW
        +  GH S W
Subjt:  QPLGHVSEW
XP_038904373.1 uncharacterized protein LOC120090731 [Benincasa hispida]1.9e-2556.25Show/hide
Query:  ILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
        I+    +KA R+ +RPI +YEFEV +G L GRVN+H RTCTCR+F+YY++PCSH IAAC  +NID  +LCS VY +D+++ AYA+P++ LGH  EW
Subjt:  ILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
TrEMBL top hitse value%identityAlignment
A0A6J1D127 uncharacterized protein LOC1110166251.2e-2545.16Show/hide
Query:  RGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSR
        R  LQ  +Y+ +   SS  +  +++A  IL+K  E+AR H +RPI R+EF+V DG     VNL+++TCTC++F+Y+E+PCSH IA   +RNI  H+LCS 
Subjt:  RGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSR

Query:  VYHVDSLIDAYAQPIQPLGHVSEW
         Y +++LI  YA+P+ PLG   +W
Subjt:  VYHVDSLIDAYAQPIQPLGHVSEW
A0A6J1D278 uncharacterized protein LOC1110166232.6e-2545.97Show/hide
Query:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT
        +++ R  LQ  +Y+ R   ++  S  +++A  IL +  E+ARRH +RPI  YEFEV DG    RVNL+++TC+C++F+YY++PCSH IAA   +N++ +T
Subjt:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT

Query:  LCSRVYHVDSLIDAYAQPIQPLGH
        LCS  Y +++LI AYA+PI PLG+
Subjt:  LCSRVYHVDSLIDAYAQPIQPLGH
A0A6J1DLB0 uncharacterized protein LOC1110219691.3e-2748.03Show/hide
Query:  KHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTL
        ++ R  LQ  +Y  R   SS  +  +++A  IL++V E+AR H +RPI R+EFEV DG    RVN++++TCTC++F YYE+PCSH IA    RNI  HTL
Subjt:  KHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTL

Query:  CSRVYHVDSLIDAYAQPIQPLGHVSEW
        CS  Y +D+LI AY +P+ PLG   +W
Subjt:  CSRVYHVDSLIDAYAQPIQPLGHVSEW
A0A6J1DQV1 uncharacterized protein LOC1110222991.2e-2541.41Show/hide
Query:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT
        ++H    LQ  YY+ R   S+  S  + +   I++   E+AR+H +RPI  YE+EV DG+   RVNL++++CTC++F+YY++PCSH + A  +RN+  +T
Subjt:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT

Query:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
        LCS  Y +++L++ YA+PI PLG   +W
Subjt:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
A0A6J1DYC4 uncharacterized protein LOC1110256781.5e-2545.31Show/hide
Query:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT
        + HIRG LQ  +Y  R   +S  +  S +A  +  +  + ARRHV+  I ++ F+V DG+L G V+L+A  C+CREF+Y+++PCSH IAA T RNI+ ++
Subjt:  MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT

Query:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
        LC   Y  +S I AYA+PI P+GH+S W
Subjt:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase5.1e-0531.82Show/hide
Query:  GRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
        G V L+  TCTC EF+  + PC H +A C    I+        Y V+     Y+    P+  +S W
Subjt:  GRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
AT1G64255.1 MuDR family transposase7.3e-0422.66Show/hide
Query:  LQAKYYKHRNKHSSNPSQWSKFATTILEKVEE-----KARRHVLRPIARYEFEVDDGHLGGR--VNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT
        L++K+ K  +   S+ +    +   +++K+EE         +++ P+    F+V      G   V L   +CTC +F+ Y+ PC H +A C     +   
Subjt:  LQAKYYKHRNKHSSNPSQWSKFATTILEKVEE-----KARRHVLRPIARYEFEVDDGHLGGR--VNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHT

Query:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
             Y ++ L   YA     +  +S W
Subjt:  LCSRVYHVDSLIDAYAQPIQPLGHVSEW
AT1G64260.1 MuDR family transposase4.6e-0624.6Show/hide
Query:  LQAKYYKHRNKHSSNPSQWSKFATTILEKVEE---KARRHVLRPIARYEFEVDDGHLGGR--VNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLC
        L++ + K  +   S+ ++   +    ++K+EE    +  +V+  + R  F+V +        V L+  TCTCR+F+ Y+ PC H +A      I+     
Subjt:  LQAKYYKHRNKHSSNPSQWSKFATTILEKVEE---KARRHVLRPIARYEFEVDDGHLGGR--VNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLC

Query:  SRVYHVDSLIDAYAQPIQPLGHVSEW
           Y V+     YA    P+  V+ W
Subjt:  SRVYHVDSLIDAYAQPIQPLGHVSEW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATATAAGAGGGTGGCTCCAAGCAAAATACTACAAACACAGGAATAAGCACTCTAGTAACCCCAGCCAGTGGTCAAAGTTTGCAACGACCATTTTGGAA
AAAGTAGAGGAGAAGGCAAGGAGGCACGTGCTCAGACCTATTGCTCGATATGAGTTTGAGGTCGACGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGA
ACATGCACCTGTCGTGAATTTGAATATTACGAACTTCCATGCTCCCATGTGATTGCTGCATGCACTTATCGTAACATTGACTATCATACCCTTTGTTCCAGAGTC
TACCATGTGGACTCCTTGATAGATGCATATGCACAGCCCATACAACCCCTTGGGCATGTGTCGGAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATATAAGAGGGTGGCTCCAAGCAAAATACTACAAACACAGGAATAAGCACTCTAGTAACCCCAGCCAGTGGTCAAAGTTTGCAACGACCATTTTGGAA
AAAGTAGAGGAGAAGGCAAGGAGGCACGTGCTCAGACCTATTGCTCGATATGAGTTTGAGGTCGACGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGA
ACATGCACCTGTCGTGAATTTGAATATTACGAACTTCCATGCTCCCATGTGATTGCTGCATGCACTTATCGTAACATTGACTATCATACCCTTTGTTCCAGAGTC
TACCATGTGGACTCCTTGATAGATGCATATGCACAGCCCATACAACCCCTTGGGCATGTGTCGGAGTGGTAG
Protein sequenceShow/hide protein sequence
MKHIRGWLQAKYYKHRNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRV
YHVDSLIDAYAQPIQPLGHVSEW