; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g005120 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g005120
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionexosome complex component RRP43
Genome locationChr04:32855465..32864193
RNA-Seq ExpressionLcy04g005120
SyntenyLcy04g005120
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR001878 - Zinc finger, CCHC-type
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603214.1 Exosome complex component RRP43, partial [Cucurbita argyrosperma subsp. sororia]2.7e-15495.99Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAV+FHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKE+RKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-15596.66Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKE+RKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]4.2e-15596.66Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

XP_022967860.1 exosome complex component RRP43 [Cucurbita maxima]2.7e-15496.32Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+GG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]1.1e-15596.99Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X12.9e-15494.65Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS +MEVDAFRRLFPIQF+ERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDC+ALTRQR KELQ+ILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

A0A1S3CEE1 exosome complex component RRP43 isoform X22.9e-15494.65Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS +MEVDAFRRLFPIQF+ERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDC+ALTRQR KELQ+ILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

A0A6J1DFM7 exosome complex component RRP432.5e-15394.31Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFP+QF+ERH AESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKEPVNKEKRKLKL+ IPFSLTC+LHKN+ILADP AEEES+METIVTVVLD SGQLVSFYKPGGS+LA+TSAVQDCVALTRQR+KELQ+ILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

A0A6J1ESF5 exosome complex component RRP432.0e-15596.66Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

A0A6J1HVL5 exosome complex component RRP431.3e-15496.32Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+GG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS
        ENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAIS
Subjt:  ENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAIS

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp431.2e-3230.11Show/hide
Query:  SGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPI
        SG   L      F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS  
Subjt:  SGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPI

Query:  VRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEP
         +PG P++ A V+S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V  +            
Subjt:  VRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEP

Query:  VNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQR
         +   R ++L+    S +  +  + +LADP  EEE +    +T++L+SS  +V   K GG+ +     ++ C+ + R +
Subjt:  VNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQR

Q2KHU3 Exosome complex component RRP439.9e-4335.02Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNF
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V+ +      +K  +N     +  +F
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNF

Query:  IPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDE
          F  T L      + DP  EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE
Subjt:  IPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDE

Q8TYC2 Exosome complex component Rrp424.6e-3232.55Show/hide
Query:  RPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADP
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +N  P S+T      Y+L DP
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADP

Query:  NAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTS-AVQDCVALTRQRLKELQ
          EEE +M+T +TV +  SG++ +  K  G +  +    ++D + L  ++ +E++
Subjt:  NAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTS-AVQDCVALTRQRLKELQ

Q96B26 Exosome complex component RRP432.1e-4535.48Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNF
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+ +      +K  +N     +  +F
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNF

Query:  IPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAI
          F  T L      + DP  EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE I
Subjt:  IPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAI

Q9D753 Exosome complex component RRP432.8e-4535.84Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P +++PD G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNF
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+ +      +K  +N     +  +F
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNF

Query:  IPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAI
          F  T L      + DP  EEE +    +TVV D  G+L   +KPGGS L   + +QDC++    R KE+  +LDE I
Subjt:  IPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAI

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein1.5e-12375.25Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MG+P+AA  DLS EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIA++FHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQIP+VALND+G++V V+ E+  
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  EN---FEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDE
        +N    EKE VNKEKRKL L  IPFSLTC+LHKNYILADP  EEES+M+T+VTVVLDSS Q+VSFYK GG+ LAY+SA++ CV L R+R KEL+ IL E
Subjt:  EN---FEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDE

AT3G07750.1 3'-5'-exoribonuclease family protein4.2e-2028.57Show/hide
Query:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   + +P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPF

Query:  SLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISVQQ
         +T      + + D  AEEES M + V++ ++ +G +    K  GS L   S + D +++ +   + L   LD  IS  +
Subjt:  SLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISVQQ

AT3G07750.2 3'-5'-exoribonuclease family protein4.2e-2028.57Show/hide
Query:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   + +P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPF

Query:  SLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISVQQ
         +T      + + D  AEEES M + V++ ++ +G +    K  GS L   S + D +++ +   + L   LD  IS  +
Subjt:  SLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISVQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCCGGGGACTTGTCGTTGGAAATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAGTTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCTGATGGAAGAACATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCTGCCATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCTGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGGGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTTG
CTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAGGAAACTGAAATTGAACTTTATT
CCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTAATGCAGAGGAGGAGTCTGTCATGGAAACTATTGTGACCGTGGTTTTAGATTCATCTGG
TCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCATTCTTGCCTACACATCAGCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATTGAAAGAACTACAGATGATTT
TAGATGAAGCAATTTCTGTGCAACAAGGCCGCAAGAGTGTGGGTCTCGACTCAATAACAGTGCAGATCGCGAGGGTCTCGGCTCAACAGTTGTCCAGATCGCGTGCGTAT
CGACTCAATGGCAGTCCAGATTGTGGATCGCGTGGGTATTTTGTCGACGACGTGGGTCTCGACTCAGCAGTAGTCCAGAATGCGTGGGTCTCGGCTCAACGATGGCATCC
TCACACGAATAGACTCGTGGGAACAGACCTGCTTCTGTGTTTTCTTTTAGGGAACAAAAAGTGGATTCCCATCACTTTTGAGAAACTCCCTGACTTTTGTTATAGCTGCA
GGAGGATTGGTCACGTGCTCCAAGAATGTGTTGAGGAGGGAACTAAATCAGCAGAGGACAGAGCATACGAGCCAGATCTCAGGGACACCAAAGGAAGCAAAGGTTTCTAT
AAGGGAAGAACGATTGATAGTTGGGGAGGGAGAGGCTCTTTCCACCGTGGTAGAGGAAGAGGTAGAGGGGAGAGAACAAGAAACTTCCAGGCCCAGGTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
TCTTCTTCAGGCTGTTTCCTCCTCCGTTTCAGCAGTTCTCGTGCCGCTACCACCGTCGTCTTTCTTCCGCTCGTGCCGCCGCCACCGTCGTCTTCCCTCGTTCATGCCGC
TGTAGCCTCCCTCCATTTTCTTCTCGCTTGCCGCTACTGTTTTCCAAAGACCCCCAAGTCTCTCGGATTTTCTTCCTTTCCATTAGACTTGTTCCATAGCACACGAACTT
CCTCGTTTCCTCCACCTTCGTGCTATCTCCACCTCCTCCACAACCACCGCAACTGAAGCCTGCCACCGGGTTTCCGATCAGAGAAAAGATAGATAAAGAAGTGCAGAATT
TTATATACACATTGGAGCTTGTGGTTCATTGTTAGGGAGAGAGAAGGAAATAGCCAGTGCTTTGAGTTCCAAAACTTGCTGGTAAAGCTTCATCTCAATTTCTTTGATGA
CGTTAGCCTAGGGTAATTTCTGGAAAAACATATAAGAGCATAAGCAATGGGACTGCCAAATGCTGCTTCCGGGGACTTGTCGTTGGAAATGGAGGTTGATGCTTTTAGAC
GACTCTTCCCAATTCAGTTTTTTGAGCGCCATCTTGCTGAATCAATACGTCCTGATGGAAGAACATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCA
TCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGTTGGCTGCCATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGC
TGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTG
GGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTT
CTTTCTGCAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAA
GGAACCTGTCAACAAAGAGAAAAGGAAACTGAAATTGAACTTTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTAATGCAGAGGAGG
AGTCTGTCATGGAAACTATTGTGACCGTGGTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCATTCTTGCCTACACATCAGCTGTTCAGGAT
TGTGTTGCATTGACAAGACAAAGATTGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGTGCAACAAGGCCGCAAGAGTGTGGGTCTCGACTCAATAACAGTGCA
GATCGCGAGGGTCTCGGCTCAACAGTTGTCCAGATCGCGTGCGTATCGACTCAATGGCAGTCCAGATTGTGGATCGCGTGGGTATTTTGTCGACGACGTGGGTCTCGACT
CAGCAGTAGTCCAGAATGCGTGGGTCTCGGCTCAACGATGGCATCCTCACACGAATAGACTCGTGGGAACAGACCTGCTTCTGTGTTTTCTTTTAGGGAACAAAAAGTGG
ATTCCCATCACTTTTGAGAAACTCCCTGACTTTTGTTATAGCTGCAGGAGGATTGGTCACGTGCTCCAAGAATGTGTTGAGGAGGGAACTAAATCAGCAGAGGACAGAGC
ATACGAGCCAGATCTCAGGGACACCAAAGGAAGCAAAGGTTTCTATAAGGGAAGAACGATTGATAGTTGGGGAGGGAGAGGCTCTTTCCACCGTGGTAGAGGAAGAGGTA
GAGGGGAGAGAACAAGAAACTTCCAGGCCCAGGTAAGGTGA
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRP
GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFI
PFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISVQQGRKSVGLDSITVQIARVSAQQLSRSRAY
RLNGSPDCGSRGYFVDDVGLDSAVVQNAWVSAQRWHPHTNRLVGTDLLLCFLLGNKKWIPITFEKLPDFCYSCRRIGHVLQECVEEGTKSAEDRAYEPDLRDTKGSKGFY
KGRTIDSWGGRGSFHRGRGRGRGERTRNFQAQVR