; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g005140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g005140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr04:32869822..32872332
RNA-Seq ExpressionLcy04g005140
SyntenyLcy04g005140
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015384077.1 uncharacterized protein LOC107176301 [Citrus sinensis]1.9e-2325.88Show/hide
Query:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK
        ++  F + D E ++   L     +D ++W+ +KKG ++VKS Y +   +     ASSS  S     W  LW    L + K   W+     +P   N+ K+
Subjt:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK

Query:  GIKLNPSCVLCRKKLETTSLLIWDC---KNFYATNNSHPNSEQIHSWVEASLSEL-------KKLE-----------------GTNLNQEHFRSRSHLSH
            +P C  C + +ET    + +C   K  +A   S P      +   ++ S++       KK++                   N    H  + S +  
Subjt:  GIKLNPSCVLCRKKLETTSLLIWDC---KNFYATNNSHPNSEQIHSWVEASLSEL-------KKLE-----------------GTNLNQEHFRSRSHLSH

Query:  EIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRL-PLIIEANAKEIVKILNNQAENL
          WKPPP+N +K+N DAA        G   V+RDS+ + +  G+ +   K ++   EA+ I  G    L L +   L  LIIE++  E+V+++NN   N 
Subjt:  EIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRL-PLIIEANAKEIVKILNNQAENL

Query:  SEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
        + +  + + I+    ++  V +NH P+  N+ AHS+A+ A
Subjt:  SEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

XP_024033483.1 uncharacterized protein LOC112095606 [Citrus clementina]1.6e-2224Show/hide
Query:  FFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKKGIKL
        F ++DA+ I+  PL     +D IIW+++KKG +SVKS Y    ++       SS   K  + W  +W      + +  +W+     +P+  N+ K+ I  
Subjt:  FFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKKGIKL

Query:  NPSCVLCRKKLETTSLLIWDCK--------------------NFYATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSW
         P+C + +  +E     + +CK                    N         N + + +  EA +   K+++     Q    S+   + ++W PP     
Subjt:  NPSCVLCRKKLETTSLLIWDCK--------------------NFYATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSW

Query:  KMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRP
        K+N DAA   +    G   ++RD  G+ I   +K      ++   EA+ +  G +   N        LI+E++A+ +V ++NN+    SE+  +   I+ 
Subjt:  KMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRP

Query:  LCASWGEVSINHCPKDENLVAHSIARLAAKRFFVMSVENSQSREGLYFLF
        L  ++  VSIN+  +  N +AHS+A+LA ++   +    S   + LY  F
Subjt:  LCASWGEVSINHCPKDENLVAHSIARLAAKRFFVMSVENSQSREGLYFLF

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]4.0e-2626.45Show/hide
Query:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK
        +RQ F  +D   I+  PL  + A+DE++W+++K+G +SVKS Y L   + S    S+S    +   W  LW  +   + K   W+  N  +P+  N+ K+
Subjt:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK

Query:  GIKLNPSCVLCRKKLETTSLLIWDCK--------NFYATNNSHPNSEQIHSWVEASLSELKK---------------------LEGTNLN----------
         +   P+C  C+  +ET S  + +CK        + ++      NS+ I S ++    EL+K                      +G  LN          
Subjt:  GIKLNPSCVLCRKKLETTSLLIWDCK--------NFYATNNSHPNSEQIHSWVEASLSELKK---------------------LEGTNLN----------

Query:  ------QEHFRSRSHLSHEI------WKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPR
              +     +SH+S  I      W PPP+N +K+N DAA+       G   V+RDS+G  +  G+ +   K +    EA+ +  G +   N      
Subjt:  ------QEHFRSRSHLSHEI------WKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPR

Query:  LPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
          LIIE++  E+V+++NN   + SE+     AI+     + +V +NH P+  N  AH +A++A
Subjt:  LPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

XP_042939503.1 uncharacterized protein LOC122274535 [Carya illinoinensis]6.6e-2122.8Show/hide
Query:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILK
        ++R+ F + +AE+I+ TPL + +AKD + W   K G FSV+SAYH+           +S  ++   VW++LW  K  P  K   W+   EA+P R ++ K
Subjt:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILK

Query:  KGIKLNPSCVLCRKKLETTSLLIWDC-----------------------------------------------------KNFYATNNSHPNSEQIHSWVE
        K I  +P C +C ++ E+    +W C                                                     +N    NN   + + +    +
Subjt:  KGIKLNPSCVLCRKKLETTSLLIWDC-----------------------------------------------------KNFYATNNSHPNSEQIHSWVE

Query:  ASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIK
        A+L+    L+G N N     +++ LS  +W  PP + +K+N D++  +     G   +VRD +G  +       +   + L  E+    +  K  ++L  
Subjt:  ASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIK

Query:  GPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIAR
        G R  +I+E ++ +++  L    E  S         + L   + +  I+H  ++ N++AH +A+
Subjt:  GPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIAR

XP_042944540.1 uncharacterized protein LOC122278417 [Carya illinoinensis]5.1e-2125.45Show/hide
Query:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILK
        ++   F    A VI+  P+ +   +D+++W   + G F+VKSAYH+       L    S  ++    W   W  +     K   W+   E++P  +N+ K
Subjt:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILK

Query:  KGIKLNPSCVLCRKKLETTSLLIWDCKNFYATNNSHPNSEQIHSWVEASLSEL----------------KKLEGTNLNQEHFRSRSHLSHEIWKPPPENS
        K I  +PSC +C ++ E+T   +W+C +        P S Q  S  E +  +L                 + +   + + H    + +   +W PPP N 
Subjt:  KGIKLNPSCVLCRKKLETTSLLIWDCKNFYATNNSHPNSEQIHSWVEASLSEL----------------KKLEGTNLNQEHFRSRSHLSHEIWKPPPENS

Query:  WKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWE--GCKHMLNLIKGPRL-PLIIEANAKEIVKILNNQAENLSEVKNLRD
         K+N DAA        G   V RD +GS +      V  K ++ +L    + E  G  H  NL K      +I+E +A +IV  +N+ AE    V  +  
Subjt:  WKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWE--GCKHMLNLIKGPRL-PLIIEANAKEIVKILNNQAENLSEVKNLRD

Query:  AIRPLCASWGEVSINHCPKDENLVAHSIAR
          R L +S  +  ++   +  N VAH +A+
Subjt:  AIRPLCASWGEVSINHCPKDENLVAHSIAR

TrEMBL top hitse value%identityAlignment
A0A2N9FFZ2 Reverse transcriptase domain-containing protein6.4e-2223.58Show/hide
Query:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILK
        ++++ F   +A VI+  PL  +D  D ++W   K G ++V+S YHL  N       SSS+ +K T +W  +W     P+ +   W+  + ++P R N+  
Subjt:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILK

Query:  KGIKLNPSCVLCRKKLETTSLLIWDCKNFYATNNSHPNSEQIH-----SWVEASLSE----------------LKKLEGTNLNQEHFRSRSHLSHEIWKP
        + I  +PSC  C  ++E+T   +W CK       S P   ++       +++  L +                L+     N + +     +H     WKP
Subjt:  KGIKLNPSCVLCRKKLETTSLLIWDCKNFYATNNSHPNSEQIH-----SWVEASLSE----------------LKKLEGTNLNQEHFRSRSHLSHEIWKP

Query:  PPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLI-IEANAKEIVKILNNQAENLSEVKN
        P E  +K+N D A F +    G   ++R+  G  +     R+    ++ A+EA          +   K     L+ +E ++K IV+ L  +A   +   N
Subjt:  PPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLI-IEANAKEIVKILNNQAENLSEVKN

Query:  LRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
        + + I+    +   V   H  ++ N +AH +A+ A
Subjt:  LRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

A0A2N9FVV5 Reverse transcriptase domain-containing protein7.6e-2323.89Show/hide
Query:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK
        I    F  + E I   PL    AKD + W+  + G FSV+SAY L  ++  S   SSS     +S+W+K+W     P+ +   W+  +EA+P ++N+ K+
Subjt:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK

Query:  GIKLNPSCVLCRKKLETTSLLIWDCKNFYATNNSHP--------------------------NSEQIHSWVEASLSELKKLEGT--------NLNQ----
         + L+P C  CRK +E +   +W C    +   S P                          N   +  ++  SL  ++             N+NQ    
Subjt:  GIKLNPSCVLCRKKLETTSLLIWDCKNFYATNNSHP--------------------------NSEQIHSWVEASLSELKKLEGT--------NLNQ----

Query:  --EHFRSRSHLS--------HEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPL
            F + + +           IW PPP   +K+N D A F +    G   ++RD  G P+    ++V    +  A+EA  +    + +L  +K     +
Subjt:  --EHFRSRSHLS--------HEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPL

Query:  IIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
        I+E +++ +VK  N+    L    ++ D ++           +H  +  N +AH++AR A
Subjt:  IIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

A0A803PD31 Uncharacterized protein5.8e-2326.09Show/hide
Query:  FFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKKGIKL
        F    A  I+  P+G     D ++WNHE  G FSVKSAYHL N  S+SL  SSS  S  T+ W+ LW+    P+ K  SW++ +  +P  +N+  +    
Subjt:  FFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKKGIKL

Query:  NPSCVLCRKKLETTSLLIWDC------------KNFYATN-----------------------------------------NSHPNSEQIHSWVEASLSE
        +P C +CR   ET +  + DC            ++FY +N                                         NS+     + +W+ + +S+
Subjt:  NPSCVLCRKKLETTSLLIWDC------------KNFYATN-----------------------------------------NSHPNSEQIHSWVEASLSE

Query:  LKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNC------KWNILALEAQTIWEGCKHMLNLI
         ++    N+ +       H+S  I K  P+N +++N DAA   +    G   V++D  G+ +  GL               LAL A  IW  C H+    
Subjt:  LKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNC------KWNILALEAQTIWEGCKHMLNLI

Query:  KGPRLPL-IIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
           ++PL ++E ++K +V  ++ Q  +LS + ++ + IR   + +  V + H  +  N  AH +AR A
Subjt:  KGPRLPL-IIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

A0A803PFL5 Uncharacterized protein1.8e-2427.88Show/hide
Query:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK
        + Q F Q+D + I+  PL    + D +IW+H   G +SVKS++HL  +IS     SSS+  KT   W+  W  +  P+ K  +WK+I  A+P    + K+
Subjt:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK

Query:  GIKLNPSCVLCRKKLETTSLLIWDC-------KNFYATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEI----------WKPPPENS
         +  +  C  C+   E+    ++ C       KN     ++H   E  +     S  + ++   T+LN  H  + S  +  I          WKPPP N 
Subjt:  GIKLNPSCVLCRKKLETTSLLIWDC-------KNFYATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEI----------WKPPPENS

Query:  WKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPL-IIEANAKEIVKILNNQAENLSEVKNLRDAI
         KMN DAA        G   VVR+  G  +    K+V   +    +EA+T++    H+LN     ++ + ++E +A  +   LN+   +LS   +L    
Subjt:  WKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPL-IIEANAKEIVKILNNQAENLSEVKNLRDAI

Query:  RPLCASWGEVSINHCPKDENLVAHSIARLA
        R L +S+  V++ H  +  N  AH +A+ A
Subjt:  RPLCASWGEVSINHCPKDENLVAHSIARLA

M5XSK0 Reverse transcriptase domain-containing protein3.4e-2326.2Show/hide
Query:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLA-ASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNIL
        +++  FF  +  +I + PL  +   D ++W+++KKG F+VKSAYH+  ++ SS   ASSS        W  LW +    R K   W++I+  +P + N+ 
Subjt:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLA-ASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNIL

Query:  KKGIKLNPSCVLCRKKLET----------------------------------TSLL----IWDCKNFYATNNSHPNSEQIHSWVEASLSELKKLEGTNL
        +K + L+  C+LC   +++                                  T L+    IW+ +N    NN     EQ+       L +  ++     
Subjt:  KKGIKLNPSCVLCRKKLET----------------------------------TSLL----IWDCKNFYATNNSHPNSEQIHSWVEASLSELKKLEGTNL

Query:  NQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPI---CFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLIIEAN
        +Q    SR     ++W+PP ENS K+N D AW      GG   VVRDS G  +      L  V     + AL A+T       +L + +G +  ++ E++
Subjt:  NQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPI---CFGLKRVNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLIIEAN

Query:  AKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
        A +IV  L N + + S +  + +  + L          H  +  N VAH +AR A
Subjt:  AKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein4.6e-1219.51Show/hide
Query:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK
        I Q   Q D   I    L      D+IIWN+   G ++V+S Y L  +  S+   + +    +  +  ++W+   +P+ K   W+ +++A+     +  +
Subjt:  IRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKK

Query:  GIKLNPSCVLCRKKLETTSLLIWDC---------------KNFYATNNSHPNSEQIHSWV-EASLSELKKL-----------------------------
        G++++PSC  C ++ E+ +  ++ C               +N   +N+   N   I ++V + ++S+  KL                             
Subjt:  GIKLNPSCVLCRKKLETTSLLIWDC---------------KNFYATNNSHPNSEQIHSWV-EASLSELKKL-----------------------------

Query:  --------EGTNLNQEHFR----SRSHLSHEI-WKPPPENSWKMNSDAAW-FEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHM
                +  N  Q H +    +R    ++I W+ PP    K N DA +  + L   G  W++R+  G+PI +G  ++    N L  E + +    +  
Subjt:  --------EGTNLNQEHFR----SRSHLSHEI-WKPPPENSWKMNSDAAW-FEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGCKHM

Query:  LNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIAR
           I+G    + +E + + ++ ++N  + + S   +L D I      +  +      +  N +AH +A+
Subjt:  LNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIAR

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.5e-0432.14Show/hide
Query:  LWDSKALPRAKACSWKLINEAIPNRVNILKKGIKLNPSCVLCRKKLETTSLLIWDC
        +W  K  P+ K   WK +N A+P    +L + I + P C  CR   ET + ++++C
Subjt:  LWDSKALPRAKACSWKLINEAIPNRVNILKKGIKLNPSCVLCRKKLETTSLLIWDC

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)2.9e-0626.17Show/hide
Query:  EQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGC
        ++   WVE ++++      T    +    RS    + W PPPE   K N D+ + +      T W++RDS+G  I  G  ++   ++ L  EA     G 
Subjt:  EQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTIWEGC

Query:  KHMLNLI
         H L ++
Subjt:  KHMLNLI

AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-1521.12Show/hide
Query:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYH-LTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNIL
        +I   F +++ ++I     G +   D   W++   G ++VKS Y  LT  I+   +     +     +++K+W S+  P+ +   WK ++ ++P    + 
Subjt:  MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYH-LTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNIL

Query:  KKGIKLNPSCVLCRKKLETTSLLIWDCK-------------------------NFY---ATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSH
         + +    +C+ C    ET + L++ C                          N Y      N +P  E+    V   L  L K    N N+  FR R  
Subjt:  KKGIKLNPSCVLCRKKLETTSLLIWDCK-------------------------NFY---ATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSH

Query:  LSHEI---------------------------------WKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTI-WE
         + E+                                 W+PPP    K N+DA W  D    G  WV+R+  G     G + +    ++L  E + + W 
Subjt:  LSHEI---------------------------------WKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKRVNCKWNILALEAQTI-WE

Query:  GCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIAR
            +L+L +     +I E++++ +++ILNN  E    +K     ++ L + + EV     P++ N +A  +AR
Subjt:  GCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIAR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.4e-0723.35Show/hide
Query:  IWDCKNFYATNNSHPNSEQIHSWVEASLSELKK-LEGTNLNQEH--FRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLK
        IW   N    N++     +  + VE +L++ K+ L+ T  N++    R+     +  W PP  +  K N DA+  E     G  W++R+S G+ I  G+ 
Subjt:  IWDCKNFYATNNSHPNSEQIHSWVEASLSELKK-LEGTNLNQEH--FRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLK

Query:  RVNCKWNILALEAQT-IWE-----GCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA
        +   +      E  T IW      G  H           +I E + + I +++N ++ N   +++  D I+    S+  +  +   +++N  A  +A+ A
Subjt:  RVNCKWNILALEAQT-IWE-----GCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLA

Query:  AKRFFVMSVENSQSREGLYFLFPHFPN
         K     S+ +S      YFL P+  N
Subjt:  AKRFFVMSVENSQSREGLYFLFPHFPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGACAATGCTTTTTCCAATTAGATGCGGAAGTTATTATCAACACTCCTCTAGGGAATAAAGATGCCAAGGATGAGATTATTTGGAATCATGAGAAGAAGGGTTG
CTTTTCGGTGAAGAGCGCCTACCACCTGACAAATAATATATCTTCATCCCTAGCAGCTTCATCCTCGGAGAAGAGTAAGACGACTTCAGTTTGGAGGAAATTATGGGATT
CCAAGGCCTTACCCAGAGCTAAGGCTTGTTCATGGAAGCTCATAAATGAGGCCATTCCCAATCGAGTTAACATTCTCAAGAAAGGGATCAAGCTAAACCCGTCTTGTGTT
CTGTGCAGAAAGAAGTTGGAAACTACATCGCTCCTAATCTGGGATTGCAAGAATTTCTATGCGACAAACAATTCCCACCCGAATTCAGAGCAGATTCATAGTTGGGTGGA
AGCTAGCCTATCCGAGTTGAAAAAGTTGGAGGGCACTAACCTTAATCAAGAGCACTTTCGGTCCCGGAGCCATCTGAGTCATGAAATCTGGAAACCCCCGCCGGAAAATT
CATGGAAAATGAATTCTGATGCAGCTTGGTTCGAGGATCTGGGCTGTGGCGGCACTGCATGGGTTGTTCGTGACTCCGACGGATCCCCGATCTGCTTCGGATTAAAACGA
GTCAACTGCAAATGGAACATTTTAGCTTTAGAAGCCCAAACAATCTGGGAGGGGTGCAAGCATATGTTAAATCTCATCAAAGGACCTCGTTTACCTTTGATCATCGAGGC
GAACGCTAAGGAGATTGTGAAGATTCTGAACAATCAAGCGGAGAATTTATCGGAGGTTAAGAACTTAAGGGATGCTATTCGACCTCTTTGTGCAAGCTGGGGAGAAGTGA
GCATCAACCACTGCCCCAAGGATGAGAATTTGGTTGCCCACTCAATCGCACGCCTGGCTGCGAAGAGATTTTTTGTTATGTCTGTGGAAAATTCCCAATCTCGGGAAGGG
CTGTATTTTTTGTTTCCTCATTTTCCTAACTGGTTTATTTTCCTCCTTAATGAGGGCCTTAACATGGACAATGATCCTTTCTCTGTTACTCTCCCAACTAAGAGATATAG
TAGACATCCTCTAGAGAATGCGCCCTATCTAATAGCCAGTTGGCACCTAATTAGTGAGGTCGAATCTCGCGTACAGTACCTCGGGTTCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAGACAATGCTTTTTCCAATTAGATGCGGAAGTTATTATCAACACTCCTCTAGGGAATAAAGATGCCAAGGATGAGATTATTTGGAATCATGAGAAGAAGGGTTG
CTTTTCGGTGAAGAGCGCCTACCACCTGACAAATAATATATCTTCATCCCTAGCAGCTTCATCCTCGGAGAAGAGTAAGACGACTTCAGTTTGGAGGAAATTATGGGATT
CCAAGGCCTTACCCAGAGCTAAGGCTTGTTCATGGAAGCTCATAAATGAGGCCATTCCCAATCGAGTTAACATTCTCAAGAAAGGGATCAAGCTAAACCCGTCTTGTGTT
CTGTGCAGAAAGAAGTTGGAAACTACATCGCTCCTAATCTGGGATTGCAAGAATTTCTATGCGACAAACAATTCCCACCCGAATTCAGAGCAGATTCATAGTTGGGTGGA
AGCTAGCCTATCCGAGTTGAAAAAGTTGGAGGGCACTAACCTTAATCAAGAGCACTTTCGGTCCCGGAGCCATCTGAGTCATGAAATCTGGAAACCCCCGCCGGAAAATT
CATGGAAAATGAATTCTGATGCAGCTTGGTTCGAGGATCTGGGCTGTGGCGGCACTGCATGGGTTGTTCGTGACTCCGACGGATCCCCGATCTGCTTCGGATTAAAACGA
GTCAACTGCAAATGGAACATTTTAGCTTTAGAAGCCCAAACAATCTGGGAGGGGTGCAAGCATATGTTAAATCTCATCAAAGGACCTCGTTTACCTTTGATCATCGAGGC
GAACGCTAAGGAGATTGTGAAGATTCTGAACAATCAAGCGGAGAATTTATCGGAGGTTAAGAACTTAAGGGATGCTATTCGACCTCTTTGTGCAAGCTGGGGAGAAGTGA
GCATCAACCACTGCCCCAAGGATGAGAATTTGGTTGCCCACTCAATCGCACGCCTGGCTGCGAAGAGATTTTTTGTTATGTCTGTGGAAAATTCCCAATCTCGGGAAGGG
CTGTATTTTTTGTTTCCTCATTTTCCTAACTGGTTTATTTTCCTCCTTAATGAGGGCCTTAACATGGACAATGATCCTTTCTCTGTTACTCTCCCAACTAAGAGATATAG
TAGACATCCTCTAGAGAATGCGCCCTATCTAATAGCCAGTTGGCACCTAATTAGTGAGGTCGAATCTCGCGTACAGTACCTCGGGTTCCTCTAG
Protein sequenceShow/hide protein sequence
MIRQCFFQLDAEVIINTPLGNKDAKDEIIWNHEKKGCFSVKSAYHLTNNISSSLAASSSEKSKTTSVWRKLWDSKALPRAKACSWKLINEAIPNRVNILKKGIKLNPSCV
LCRKKLETTSLLIWDCKNFYATNNSHPNSEQIHSWVEASLSELKKLEGTNLNQEHFRSRSHLSHEIWKPPPENSWKMNSDAAWFEDLGCGGTAWVVRDSDGSPICFGLKR
VNCKWNILALEAQTIWEGCKHMLNLIKGPRLPLIIEANAKEIVKILNNQAENLSEVKNLRDAIRPLCASWGEVSINHCPKDENLVAHSIARLAAKRFFVMSVENSQSREG
LYFLFPHFPNWFIFLLNEGLNMDNDPFSVTLPTKRYSRHPLENAPYLIASWHLISEVESRVQYLGFL