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Lcy04g005170 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g005170
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr04:32995987..32996446
RNA-Seq ExpressionLcy04g005170
SyntenyLcy04g005170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]1.2e-0531.03Show/hide
Query:  ARLTIMKKRVLMFEKAFSTKTRPLPAFIEDILH--RTVMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGI
        ARL + K++    EK+ S     +  F    LH  R  + L+   V FSA+ IN+I+++    Y + N  +++PT +Q+ +AL ++   G+KW  S  G+
Subjt:  ARLTIMKKRVLMFEKAFSTKTRPLPAFIEDILH--RTVMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGI

Query:  RTLISGDLKPKAAVWL
         TL S  L  +  +W+
Subjt:  RTLISGDLKPKAAVWL

XP_038885414.1 nucleolar protein 58-like [Benincasa hispida]3.8e-0431.71Show/hide
Query:  HRTVMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGIRTLISGDLKPKAAVWL
        +R  +  +G  V FSAK IN+++++        +  +++P  E + +AL ++A  G++W  S  GIRTL S  L P+  +W+
Subjt:  HRTVMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGIRTLISGDLKPKAAVWL

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]5.4e-0631.87Show/hide
Query:  AFIEDILHRT--VMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGIRTLISGDLKPKAAVWL
        AF +  LH T   + ++G +V FSA+ IN+++++  +   + N  +++P  E++ +AL  +   G +W  S  GI+TL S  L P+A +W+
Subjt:  AFIEDILHRT--VMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGIRTLISGDLKPKAAVWL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCCTCATGCTGACAAACAGGCCCGCCTGACCATCATGAAGAAAAGGGTCCTGATGTTTGAGAAGGCATTCTCCACCAAGACAAGACCTCTCCCAGCTTTCATAGA
AGATATTTTGCACAGGACGGTCATGTTCTTGAGAGGCCGAGTGGTGGAGTTCTCAGCGAAGCAAATCAATCAGATTTTTCGATTGCCATCCCTACATTATCCAGCTGAAA
ACATGGCCATGGAGGAGCCAACGACCGAGCAGCTGGTAGAGGCCCTATCTTTGGTGGCCCACGAGGGAGTCAAGTGGCAGAAGTCCAGGATAGGGATCAGGACTCTCATA
TCTGGAGATTTGAAGCCAAAGGCAGCAGTCTGGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCCTCATGCTGACAAACAGGCCCGCCTGACCATCATGAAGAAAAGGGTCCTGATGTTTGAGAAGGCATTCTCCACCAAGACAAGACCTCTCCCAGCTTTCATAGA
AGATATTTTGCACAGGACGGTCATGTTCTTGAGAGGCCGAGTGGTGGAGTTCTCAGCGAAGCAAATCAATCAGATTTTTCGATTGCCATCCCTACATTATCCAGCTGAAA
ACATGGCCATGGAGGAGCCAACGACCGAGCAGCTGGTAGAGGCCCTATCTTTGGTGGCCCACGAGGGAGTCAAGTGGCAGAAGTCCAGGATAGGGATCAGGACTCTCATA
TCTGGAGATTTGAAGCCAAAGGCAGCAGTCTGGCTTTAA
Protein sequenceShow/hide protein sequence
MGPHADKQARLTIMKKRVLMFEKAFSTKTRPLPAFIEDILHRTVMFLRGRVVEFSAKQINQIFRLPSLHYPAENMAMEEPTTEQLVEALSLVAHEGVKWQKSRIGIRTLI
SGDLKPKAAVWL