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Lcy04g006140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g006140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionF-box family protein
Genome locationChr04:35438431..35439872
RNA-Seq ExpressionLcy04g006140
SyntenyLcy04g006140
Gene Ontology termsNA
InterPro domainsIPR040338 - Putative F-box protein At1g67623-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601108.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2960Show/hide
Query:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM
        I R TK    S +P  IE LP DLLI+VL KVA  S T+L   KLA+K+F EAS  G IF+H S  +F K+ W  NPEF SFME CN NGNPE LY+KGM
Subjt:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM

Query:  LEFFTRCKEASGLTNSKASA
        LEFFT C+EASG+T  K SA
Subjt:  LEFFTRCKEASGLTNSKASA
XP_023549398.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]1.3e-2960Show/hide
Query:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM
        I RTTK    + +P  IE LP DLLI+VL KVA  S TDL   KLA+K+F +AS  G IF+H S  +F K+ W  NPEF SFME CN NGNPE LY+KGM
Subjt:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM

Query:  LEFFTRCKEASGLTNSKASA
        LEFFT C+EASGL   K SA
Subjt:  LEFFTRCKEASGLTNSKASA
XP_023549459.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]1.3e-2960Show/hide
Query:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM
        I RTTK    + +P  IE LP DLLI+VL KVA  S TDL   KLA+K+F +AS  G IF+H S  +F K+ W  NPEF SFME CN NGNPE LY+KGM
Subjt:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM

Query:  LEFFTRCKEASGLTNSKASA
        LEFFT C+EASGL   K SA
Subjt:  LEFFTRCKEASGLTNSKASA
XP_023549584.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]9.9e-3060Show/hide
Query:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM
        I RTTK    + +P  IE LP DLLI+VL KVA  S TDL   KLA+K+F EAS  G IF+H S  +F K+ W  NPEF SFME CN NGNPE LY KGM
Subjt:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM

Query:  LEFFTRCKEASGLTNSKASA
        LEFFT C+EASG+   K SA
Subjt:  LEFFTRCKEASGLTNSKASA
XP_038891683.1 putative F-box protein At1g67623 [Benincasa hispida]8.4e-2962.16Show/hide
Query:  MAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKE
        +  SP  I+ LP DLLI+VL KVA SS TDL   KLA+KDF E S +G IFRHVS G+F K+ W  +PEF S +E CN N NPE+LYRKGMLEFFT C+E
Subjt:  MAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKE

Query:  ASGLTNSKASA
        ASGL   K SA
Subjt:  ASGLTNSKASA
TrEMBL top hitse value%identityAlignment
A0A1S3BXN2 putative F-box protein At1g676233.4e-2855.73Show/hide
Query:  SLVFHYFLCMKINIHRTTKAMAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKN
        SL FH  +      +RT     +SP  I+ LP DLL +VL KVA SS  DL   KLA+K F EAS D  IF+HVS G+F    W  +PEF SF+E CN N
Subjt:  SLVFHYFLCMKINIHRTTKAMAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKN

Query:  GNPEALYRKGMLEFFTRCKEASGLTNSKASA
         NPE+LYRKGMLEFFT CKEASGL   K SA
Subjt:  GNPEALYRKGMLEFFTRCKEASGLTNSKASA
A0A6J1GZQ6 F-box protein At2g35280-like2.0e-2862.96Show/hide
Query:  SPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASG
        SP PIE LP DLLI+VL KVA SS TDL + KLA+K F EAS    IF+H S  +F K+ W  + EF SFME CN NGNPE LYRKGMLEFFT C+EASG
Subjt:  SPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASG

Query:  LTNSKASA
        +   K SA
Subjt:  LTNSKASA
A0A6J1H1G4 putative F-box protein At1g676239.1e-2957.5Show/hide
Query:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM
        I R TK +  S +P  IE LP DL I+VL KVA  S TDL   KLA+K+F +AS  G IF+H S  +F K+ W  NPEF SFME CN NGNPE LY+KGM
Subjt:  IHRTTKAMAISPWP--IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM

Query:  LEFFTRCKEASGLTNSKASA
         EFFT C+EASG+   K SA
Subjt:  LEFFTRCKEASGLTNSKASA
A0A6J1JRV1 putative F-box protein At1g676236.9e-2958.68Show/hide
Query:  NIHRTTKA--MAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKG
        +I R TK   ++ SP  IE LP DLLI++L KVA SS TDL   KLA+K F EAS    IF+H S  +F K+ W  + EF SFME CN NGNPE LYRKG
Subjt:  NIHRTTKA--MAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKG

Query:  MLEFFTRCKEASGLTNSKASA
        MLEFFT C+EASG+T  K SA
Subjt:  MLEFFTRCKEASGLTNSKASA
A0A6J1JRX4 putative F-box protein At1g676239.1e-2959.17Show/hide
Query:  IHRTTKA--MAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM
        I R TK   ++ SP  IE LP DLLI++L KVA SS TDL   KLA+K F EAS    IF+H S  +F K+ W  + EF SFME CN NGNPE LYRKGM
Subjt:  IHRTTKA--MAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGM

Query:  LEFFTRCKEASGLTNSKASA
        LEFFT C+EASG+T  K SA
Subjt:  LEFFTRCKEASGLTNSKASA
SwissProt top hitse value%identityAlignment
Q1PEW8 F-box protein At2g352801.4e-0529.55Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFF
        +E LP+DLL +++ K+   S+ D  N  L+ K+   ++ D ++ + ++     K P       L  M+ C  N NP+A Y KG++ +F
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFF
Q9FXC7 Putative F-box protein At1g676235.0e-0831.96Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASGL
        ++ LPEDLL+++      SS + + N +L SK F     +  +F  +S      +PW  N     F+E C ++ NPEAL++KG + +F    +  GL
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASGL
Arabidopsis top hitse value%identityAlignment
AT1G67623.1 F-box family protein3.5e-0931.96Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASGL
        ++ LPEDLL+++      SS + + N +L SK F     +  +F  +S      +PW  N     F+E C ++ NPEAL++KG + +F    +  GL
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASGL
AT1G74875.1 FUNCTIONS IN: molecular_function unknown3.4e-1237.04Show/hide
Query:  IQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTR
        I +++ V +SS ++  N +L SK F   S D  I + +S    P +PW+   +F +F + C K+GN EA+YRKG++++F R
Subjt:  IQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTR
AT2G35280.1 F-box family protein9.6e-0729.55Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFF
        +E LP+DLL +++ K+   S+ D  N  L+ K+   ++ D ++ + ++     K P       L  M+ C  N NP+A Y KG++ +F
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASIDGQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGGCCGAAGCGCCGAGGTACCCAGGGAGGAGCCCAATATTGCGGGATCCGTCGACGTTGCTGACGCCGAGTTGACAGTTGTGAACGCTTCGGCCAACAACATTAG
GGAGGGTGAAATGTTTTTCAGCCTTGTCTTCCACTATTTTCTTTGTATGAAAATTAATATTCATAGAACAACAAAAGCCATGGCAATTTCTCCATGGCCCATAGAATTCC
TGCCTGAAGATTTACTAATCCAAGTACTTGTCAAAGTTGCAACCTCTTCGTCGACCGATTTATTCAACACCAAATTAGCATCCAAAGATTTTTTCGAAGCCTCGATCGAC
GGCCAGATATTTCGCCACGTGTCATTCGGAAGCTTCCCAAAAGTTCCATGGAAGACTAACCCCGAATTCTTGTCGTTCATGGAGAATTGCAACAAGAATGGAAATCCAGA
AGCTTTGTACAGAAAGGGAATGTTGGAATTCTTCACCCGTTGTAAAGAAGCTTCTGGATTAACGAATTCTAAAGCTTCCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGGCCGAAGCGCCGAGGTACCCAGGGAGGAGCCCAATATTGCGGGATCCGTCGACGTTGCTGACGCCGAGTTGACAGTTGTGAACGCTTCGGCCAACAACATTAG
GGAGGGTGAAATGTTTTTCAGCCTTGTCTTCCACTATTTTCTTTGTATGAAAATTAATATTCATAGAACAACAAAAGCCATGGCAATTTCTCCATGGCCCATAGAATTCC
TGCCTGAAGATTTACTAATCCAAGTACTTGTCAAAGTTGCAACCTCTTCGTCGACCGATTTATTCAACACCAAATTAGCATCCAAAGATTTTTTCGAAGCCTCGATCGAC
GGCCAGATATTTCGCCACGTGTCATTCGGAAGCTTCCCAAAAGTTCCATGGAAGACTAACCCCGAATTCTTGTCGTTCATGGAGAATTGCAACAAGAATGGAAATCCAGA
AGCTTTGTACAGAAAGGGAATGTTGGAATTCTTCACCCGTTGTAAAGAAGCTTCTGGATTAACGAATTCTAAAGCTTCCGCTTAA
Protein sequenceShow/hide protein sequence
MPGRSAEVPREEPNIAGSVDVADAELTVVNASANNIREGEMFFSLVFHYFLCMKINIHRTTKAMAISPWPIEFLPEDLLIQVLVKVATSSSTDLFNTKLASKDFFEASID
GQIFRHVSFGSFPKVPWKTNPEFLSFMENCNKNGNPEALYRKGMLEFFTRCKEASGLTNSKASA