| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.0e-142 | 40.06 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
+CK++W+++GDENS+FFHK+CTAR ++ I ++I+ G + ++D+ + I+HF IY N + + NLDW PI+ + L PF EAE++ +KS
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
+NKA GPDG+ + F +K W+ +K +I +F DF I N+VVN T I LI KK +DFRPISLTTA+YK++AK LA+RLK TL DTIS +Q+A
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
Query: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
FV+ RQI++ IL+ANEA+D WR K++G +IKLD+EKAFDK++W FID VL+ K Y WR I +CISSV YSI++NG+PRG I+ PLSPF
Subjt: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
Query: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
+FVLAMDYLSRL+ K ++GV ++++TH+LFADDIL+FV+D D + N+ I+ FE ASGL INL KST+ IN+ R I WG
Subjt: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
Query: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
LP +YLG+PLGG P ++ FW+ +++KIQ+++ NW++ LSKGGR+ LI S L+ + ++S + QK++ W + F NG
Subjt: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
Query: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
I+L N + L I + N+ F L +L L E+ ++ + K G K N K C + K
Subjt: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
Query: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
W+V +G+ I FWL NW+ PL RL+ LS+NK +V+E W+ S W+ RPL D E W+ + LP P RG W + ++ F
Subjt: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
Query: TKYARSILSVAPSRPFSSH
T + ++ AP P + H
Subjt: TKYARSILSVAPSRPFSSH
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| KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.6e-142 | 40.47 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
+CK++W+++GDENS+FFHK+CTAR ++ I ++I+ G + ++D+ + I+HF IY N + + NLDW PI+ L PF E+E++ +KS
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
+NKA GPDGFT+ F +K W+ +K +I +F DF N N+VVN T I LI KK+ +SDFRPISLTTA+YK++AKVLA+RLK TL TIS Q+A
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
Query: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
FV+ RQI++ IL+ANEA+D WR K++G +IKLD+EKAFDK++W FID +L+ K Y WR+ I +CISSV YSI++NG+PRG I+ PLSPF
Subjt: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
Query: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
+FVLAMDYLS L+ +KG ++GV G ++++TH+LFADDIL+FV+D + + N+ I+ FE ASGL INL KST+ IN+ R + I WG
Subjt: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
Query: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
LP YLG+PLGG P ++ FW+ +++KIQ+++ +W++ LSKGGR+ LI S L+ + +LS + QK++ W + F NG
Subjt: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
Query: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
I+L N + L I + ++ F L +L L E+ ++ + K G K N K C + K
Subjt: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
Query: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
GW+V +G+ I FWL NW+ PL V RL+ LS+NK +V++ W+ S + WN RPL D E W+ + LP P RG W + ++ F
Subjt: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
Query: TKYARSILSVAPSRPFSSH
T + LS A + P + H
Subjt: TKYARSILSVAPSRPFSSH
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| KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 8.6e-141 | 40.06 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
+CK++W+++GDENS+FFHK+CT R ++ I ++I+ G + ++D+ + I+HF IY N + + N DW PI+ L PF E+E++ +KS
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
+NKA GPDGFT+ F +K W+ +K +I +F DF N N+VVN T I LI KKN +SDF+PISLTTA+YK++AKVLA+RLK TL DTIS Q+A
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
Query: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
FV+ RQI++ IL+ANEA+D WR K++G +IKLD+EKAFDK++W FID +L+ K Y WR+ I +CISSV YSI++NG+PRG I+ PLS F
Subjt: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
Query: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
+FVLAMDYLS L+ +KG ++GV G ++++TH+LFADDIL+FV+D + + N+ I+ FE ASGL INL KST+ IN+ R + I WG
Subjt: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
Query: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
LP YLG+PLGG P ++ FW+ +++KIQ+++ +W++ LSKGGR+ LI S L+ + +LS + QK++ W + F NG
Subjt: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
Query: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
I+L N + L I ++ F L +L L E+ ++ + K G K N K C + K
Subjt: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
Query: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
GW+V +G+ I FWL NW+ PL RL+ LS+NK +V++ W+ S + WN RPL D E W+ + LP P RG W + ++ F
Subjt: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
Query: TKYARSILSVAPSRPFSSH
T + LS A + P + H
Subjt: TKYARSILSVAPSRPFSSH
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| KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 9.2e-143 | 41.48 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
R KKLWL +GDENS+FFH++CTAR +RN I E+ EEG+ S++ + + IK F I+ + + + + NL+W PI +L +PF E E+ I
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
Query: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
S+ K GPDGF I FFK +W +LK IM +F DF+ + N+ +N+T IALIPKK N DFRPISLTT++YKI+AK L+ RLKT+L +TIS NQL
Subjt: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
Query: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
AFV+ RQI+D IL+ANEAVD W+V K KG ++KLD+EKAFD ++WDFID VL K +P WR WI+ CIS+V+YSII+NG+P+G I+A PLSP
Subjt: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
Query: FLFVLAMDYLSRLIEAAEKKGLLSGV-VMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
FLFV+AMDYLSRL+ E G + GV + +I+H+LFADDILLF++D+D + N+ + FE+ASGL+INL KS + +N+++ R + FWG S
Subjt: FLFVLAMDYLSRLIEAAEKKGLLSGV-VMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
Query: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQKLKVVWTSIKSKVLTKLF----SLNGLGVFSLRI
LP++YLG+PLGG PK+ FW + EKIQ+++ NW++ +SKGGRL LI+S L +LS+ Q + +I+ L+ S G + +
Subjt: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQKLKVVWTSIKSKVLTKLF----SLNGLGVFSLRI
Query: TLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEIW----GGWE
L IS + L T +L L E ++ + K +G G + + A R W W+
Subjt: TLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEIW----GGWE
Query: VRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFSTKYAR
+ NG I FW NWS+ G L RL+ LS +K++TV++AW+ D W RR L DRE +W ++ +LP P GS W+ + FS A+
Subjt: VRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFSTKYAR
Query: SILS
++S
Subjt: SILS
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| TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 9.2e-143 | 40.75 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
R KK+WL +GDENSAFFH++C++R +RN IHE+ EEG ++N + + HF +Y ++ + + + NL+W PI+ S L +PF E E+ I
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
Query: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
S NKA GPDGF I FFK +W++LK I+ +F DFF + N+ + +T IALI KK + DFRPISLTT++YKI+AK L+ RLK TL DTIS NQL
Subjt: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
Query: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
AF++ RQI+D IL+ANEA+D W+V K KG ++KLD+EKAFD +SWDF D VL K YP +WR WI CIS+V+YSII+NGKP+G I+A PLSP
Subjt: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
Query: FLFVLAMDYLSRLIEAAEKKGLLSGVVM-GDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
FLFV+AMDYLSRL+ E G + GV + D +I+H+LFADDILLFV+D+D + N+ I FEKASGL+INL KS + +N++ R + W
Subjt: FLFVLAMDYLSRLIEAAEKKGLLSGVVM-GDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
Query: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQ-------KLKVVWTS--------------IKSKV
H LP+ YLG+PLGG PK+ FW + ++IQ+++ NW++ +SKGGRL LI+S L + +LS+ Q ++ +W + I +
Subjt: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQ-------KLKVVWTS--------------IKSKV
Query: LTKLFSLNGLGVFSLRITLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGR
+TK GLG+ L+IT + AL +S + R + N L L+ K +G+ G + + + A
Subjt: LTKLFSLNGLGVFSLRITLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGR
Query: RKKKGEEIW----GGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDV
R W GW++ NG I FW NWS G L RL+ LS +K ++++ W+ ++ W + RR L DRE+ W + LP+P + RG
Subjt: RKKKGEEIW----GGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDV
Query: QRWLASEDDFFSTKYARSILSVAP
W++ FS A+S +S P
Subjt: QRWLASEDDFFSTKYARSILSVAP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein | 9.9e-143 | 40.06 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
+CK++W+++GDENS+FFHK+CTAR ++ I ++I+ G + ++D+ + I+HF IY N + + NLDW PI+ + L PF EAE++ +KS
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
+NKA GPDG+ + F +K W+ +K +I +F DF I N+VVN T I LI KK +DFRPISLTTA+YK++AK LA+RLK TL DTIS +Q+A
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
Query: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
FV+ RQI++ IL+ANEA+D WR K++G +IKLD+EKAFDK++W FID VL+ K Y WR I +CISSV YSI++NG+PRG I+ PLSPF
Subjt: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
Query: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
+FVLAMDYLSRL+ K ++GV ++++TH+LFADDIL+FV+D D + N+ I+ FE ASGL INL KST+ IN+ R I WG
Subjt: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
Query: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
LP +YLG+PLGG P ++ FW+ +++KIQ+++ NW++ LSKGGR+ LI S L+ + ++S + QK++ W + F NG
Subjt: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
Query: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
I+L N + L I + N+ F L +L L E+ ++ + K G K N K C + K
Subjt: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
Query: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
W+V +G+ I FWL NW+ PL RL+ LS+NK +V+E W+ S W+ RPL D E W+ + LP P RG W + ++ F
Subjt: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
Query: TKYARSILSVAPSRPFSSH
T + ++ AP P + H
Subjt: TKYARSILSVAPSRPFSSH
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| A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein | 7.6e-143 | 40.47 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
+CK++W+++GDENS+FFHK+CTAR ++ I ++I+ G + ++D+ + I+HF IY N + + NLDW PI+ L PF E+E++ +KS
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
+NKA GPDGFT+ F +K W+ +K +I +F DF N N+VVN T I LI KK+ +SDFRPISLTTA+YK++AKVLA+RLK TL TIS Q+A
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
Query: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
FV+ RQI++ IL+ANEA+D WR K++G +IKLD+EKAFDK++W FID +L+ K Y WR+ I +CISSV YSI++NG+PRG I+ PLSPF
Subjt: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
Query: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
+FVLAMDYLS L+ +KG ++GV G ++++TH+LFADDIL+FV+D + + N+ I+ FE ASGL INL KST+ IN+ R + I WG
Subjt: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
Query: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
LP YLG+PLGG P ++ FW+ +++KIQ+++ +W++ LSKGGR+ LI S L+ + +LS + QK++ W + F NG
Subjt: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
Query: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
I+L N + L I + ++ F L +L L E+ ++ + K G K N K C + K
Subjt: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
Query: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
GW+V +G+ I FWL NW+ PL V RL+ LS+NK +V++ W+ S + WN RPL D E W+ + LP P RG W + ++ F
Subjt: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
Query: TKYARSILSVAPSRPFSSH
T + LS A + P + H
Subjt: TKYARSILSVAPSRPFSSH
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| A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein | 4.2e-141 | 40.06 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
+CK++W+++GDENS+FFHK+CT R ++ I ++I+ G + ++D+ + I+HF IY N + + N DW PI+ L PF E+E++ +KS
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
+NKA GPDGFT+ F +K W+ +K +I +F DF N N+VVN T I LI KKN +SDF+PISLTTA+YK++AKVLA+RLK TL DTIS Q+A
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLA
Query: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
FV+ RQI++ IL+ANEA+D WR K++G +IKLD+EKAFDK++W FID +L+ K Y WR+ I +CISSV YSI++NG+PRG I+ PLS F
Subjt: FVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSPF
Query: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
+FVLAMDYLS L+ +KG ++GV G ++++TH+LFADDIL+FV+D + + N+ I+ FE ASGL INL KST+ IN+ R + I WG
Subjt: LFVLAMDYLSRLIEAAEKKGLLSGVVMG-DISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSH
Query: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
LP YLG+PLGG P ++ FW+ +++KIQ+++ +W++ LSKGGR+ LI S L+ + +LS + QK++ W + F NG
Subjt: PLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLS-------LPQKLKVVWTSIKSKVLTKLFSLNGLGVFSL
Query: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
I+L N + L I ++ F L +L L E+ ++ + K G K N K C + K
Subjt: RITLFGGNSL-------ALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEI
Query: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
GW+V +G+ I FWL NW+ PL RL+ LS+NK +V++ W+ S + WN RPL D E W+ + LP P RG W + ++ F
Subjt: WGGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFS
Query: TKYARSILSVAPSRPFSSH
T + LS A + P + H
Subjt: TKYARSILSVAPSRPFSSH
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| A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein | 4.4e-143 | 41.48 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
R KKLWL +GDENS+FFH++CTAR +RN I E+ EEG+ S++ + + IK F I+ + + + + NL+W PI +L +PF E E+ I
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
Query: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
S+ K GPDGF I FFK +W +LK IM +F DF+ + N+ +N+T IALIPKK N DFRPISLTT++YKI+AK L+ RLKT+L +TIS NQL
Subjt: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
Query: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
AFV+ RQI+D IL+ANEAVD W+V K KG ++KLD+EKAFD ++WDFID VL K +P WR WI+ CIS+V+YSII+NG+P+G I+A PLSP
Subjt: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
Query: FLFVLAMDYLSRLIEAAEKKGLLSGV-VMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
FLFV+AMDYLSRL+ E G + GV + +I+H+LFADDILLF++D+D + N+ + FE+ASGL+INL KS + +N+++ R + FWG S
Subjt: FLFVLAMDYLSRLIEAAEKKGLLSGV-VMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
Query: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQKLKVVWTSIKSKVLTKLF----SLNGLGVFSLRI
LP++YLG+PLGG PK+ FW + EKIQ+++ NW++ +SKGGRL LI+S L +LS+ Q + +I+ L+ S G + +
Subjt: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQKLKVVWTSIKSKVLTKLF----SLNGLGVFSLRI
Query: TLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEIW----GGWE
L IS + L T +L L E ++ + K +G G + + A R W W+
Subjt: TLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGRRKKKGEEIW----GGWE
Query: VRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFSTKYAR
+ NG I FW NWS+ G L RL+ LS +K++TV++AW+ D W RR L DRE +W ++ +LP P GS W+ + FS A+
Subjt: VRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDVQRWLASEDDFFSTKYAR
Query: SILS
++S
Subjt: SILS
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| A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein | 4.4e-143 | 40.75 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
R KK+WL +GDENSAFFH++C++R +RN IHE+ EEG ++N + + HF +Y ++ + + + NL+W PI+ S L +PF E E+ I
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHEPE-WIVTNLDWAPINLDLASSLISPFREAEVFDCIK
Query: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
S NKA GPDGF I FFK +W++LK I+ +F DFF + N+ + +T IALI KK + DFRPISLTT++YKI+AK L+ RLK TL DTIS NQL
Subjt: SIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQL
Query: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
AF++ RQI+D IL+ANEA+D W+V K KG ++KLD+EKAFD +SWDF D VL K YP +WR WI CIS+V+YSII+NGKP+G I+A PLSP
Subjt: AFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKPRGNIQAK------IPLSP
Query: FLFVLAMDYLSRLIEAAEKKGLLSGVVM-GDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
FLFV+AMDYLSRL+ E G + GV + D +I+H+LFADDILLFV+D+D + N+ I FEKASGL+INL KS + +N++ R + W
Subjt: FLFVLAMDYLSRLIEAAEKKGLLSGVVM-GDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGS
Query: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQ-------KLKVVWTS--------------IKSKV
H LP+ YLG+PLGG PK+ FW + ++IQ+++ NW++ +SKGGRL LI+S L + +LS+ Q ++ +W + I +
Subjt: HPLPIAYLGIPLGGTPKNTQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQ-------KLKVVWTS--------------IKSKV
Query: LTKLFSLNGLGVFSLRITLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGR
+TK GLG+ L+IT + AL +S + R + N L L+ K +G+ G + + + A
Subjt: LTKLFSLNGLGVFSLRITLFGGNSLALNISAFNTRVFPLATNFLVPDLLEQLEKEATVLAGPTHRRKKNEGEGGGGVNRKTGEKNGEGKGDGGGCCAAGR
Query: RKKKGEEIW----GGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDV
R W GW++ NG I FW NWS G L RL+ LS +K ++++ W+ ++ W + RR L DRE+ W + LP+P + RG
Subjt: RKKKGEEIW----GGWEVRNGKSILFWLYNWSVLGPLKYVCDRLYQLSSNKNLTVEEAWSISDRVWNFSPRRPLLDREVQRWNELSGLLPIPDSFRGSDV
Query: QRWLASEDDFFSTKYARSILSVAP
W++ FS A+S +S P
Subjt: QRWLASEDDFFSTKYARSILSVAP
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| SwissProt top hits | e value | %identity | Alignment |
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| O00370 LINE-1 retrotransposable element ORF2 protein | 2.0e-36 | 26.7 | Show/hide |
Query: RHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIY----DANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKSIGQNKASGPDGFTIKFFKK
+ +NQI + +++G ++T + +++ +Y + E + + +N + SL P +E+ I S+ K+ GPDGFT +F+++
Subjt: RHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIY----DANHEPEWIVTNLDWAPINLDLASSLISPFREAEVFDCIKSIGQNKASGPDGFTIKFFKK
Query: FWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNM-AGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLAFVRKRQISDPILLA-NEA
+ L P ++ +F I +I LIPK +FRPISL KIL K+LA R++ + I +Q+ F+ Q I + N
Subjt: FWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNM-AGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLAFVRKRQISDPILLA-NEA
Query: VDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKP------RGNIQAKIPLSPFLFVLAMDYLSRLIEAAE
+ R K V+I +D EKAFDKI F+ L G + I+A + +IILNG+ + + PLSP LF + ++ L+R I +
Subjt: VDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKP------RGNIQAKIPLSPFLFVLAMDYLSRLIEAAE
Query: KKGLLSGVVMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSHPLPIA-----YLGIPLGG
+ + G+ +G + LFADD+++++++ + +N+ +I +F K SG +IN+ KS N Q S I G P IA YLGI L
Subjt: KKGLLSGVVMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDITRFWGCGSHPLPIA-----YLGIPLGG
Query: TPKN--TQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGL
K+ + ++P++++I+ W+ + S GR+ +++ +
Subjt: TPKN--TQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGL
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| P08548 LINE-1 reverse transcriptase homolog | 2.0e-31 | 27.37 | Show/hide |
Query: PFREAEVFDCIKSIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNM-AGNISDFRPISLTTALYKILAKVLAERL
P +E+ I+++ + K+ GPDGFT +F++ F L P ++++F + I NI LIPK ++RPISL KIL K+L R+
Subjt: PFREAEVFDCIKSIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNM-AGNISDFRPISLTTALYKILAKVLAERL
Query: KTTLGDTISLNQLAFVRKRQISDPILLA-NEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKP----
+ + I +Q+ F+ Q I + N + ++ K +++ +D EKAFD I F+ L G T+ I+A S + +IILNG
Subjt: KTTLGDTISLNQLAFVRKRQISDPILLA-NEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYSIILNGKP----
Query: --RGNIQAKIPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQ
R + PLSP LF + M+ L+ I E+K + G+ +G I LFADD+++++++ + + +IK + SG +IN HKS +Q
Subjt: --RGNIQAKIPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQ
Query: RTSDITRFWGCGSHPLPIAYLGIPLGGTPKN--TQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGL
+ P + YLG+ L K+ + +E + ++I + W+ + S GR+ +++ +
Subjt: RTSDITRFWGCGSHPLPIAYLGIPLGGTPKN--TQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGL
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| P11369 LINE-1 retrotransposable element ORF2 protein | 7.5e-31 | 27.01 | Show/hide |
Query: INLDLASSLISPFREAEVFDCIKSIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPK-KNMAGNISDFRPISLTTALY
+N D L SP E+ I S+ K+ GPDGF+ +F++ F L P + +FH I LIPK + I +FRPISL
Subjt: INLDLASSLISPFREAEVFDCIKSIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPK-KNMAGNISDFRPISLTTALY
Query: KILAKVLAERLKTTLGDTISLNQLAFVRKRQISDPILLANEAVD-LWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYS
KIL K+LA R++ + I +Q+ F+ Q I + + + ++ K ++I LD EKAFDKI F+ VL G + + IKA S +
Subjt: KILAKVLAERLKTTLGDTISLNQLAFVRKRQISDPILLANEAVD-LWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKACISSVSYS
Query: IILNGKPRGNIQAK------IPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHK
I +NG+ I K PLSP+LF + ++ L+R I ++ + G+ +G + L ADD+++++ D + + +I SF + G +IN +K
Subjt: IILNGKPRGNIQAK------IPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHK
Query: STVSGINLTDQRTSDITRFWGCGSHPLPIAYLGIPLGGTPKN--TQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQKLKVVWTS
S Q +I I YLG+ L K+ + ++ + ++I+ ++ W+ + S GR+ ++ K+++ K + +
Subjt: STVSGINLTDQRTSDITRFWGCGSHPLPIAYLGIPLGGTPKN--TQFWEPMIEKIQRRIQNWRFVSLSKGGRLALIQSGLQIWCVGKLSLPQKLKVVWTS
Query: IKSKVLTKLFS
I K+ T+ F+
Subjt: IKSKVLTKLFS
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 3.1e-24 | 25.11 | Show/hide |
Query: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANH-EPEWIVTNLDWAPINLDLASS-LISPFREAEVFDCI
R + L D D S FF+ + + R QI L +E+G + + + ++ + P+ D P+ + L +P E+ +
Subjt: RCKKLWLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANH-EPEWIVTNLDWAPINLDLASS-LISPFREAEVFDCI
Query: KSIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQ
+ + NK+ G DG TI+FF+ FW+ L P V + F ++L+PKK I ++RP+SL + YKI+AK ++ RLK+ L + I +Q
Subjt: KSIGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQ
Query: LAFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKA------CISSVSYSIILNGKPRGNIQAKIPLS
V R I D + L + + R + + LD EKAFD++ ++ L + + ++K C+ +++S+ ++ PLS
Subjt: LAFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVLLNKGYPNTWRDWIKA------CISSVSYSIILNGKPRGNIQAKIPLS
Query: PFLFVLAMDYLSRLIEAAEKKGLLSGVVM--GDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDI-TRFWG
L+ LA++ L+ + L+G+V+ D+ + +ADD++L Q D +E + + AS +IN KS SG+ + + F
Subjt: PFLFVLAMDYLSRLIEAAEKKGLLSGVVM--GDISITHLLFADDILLFVQDDDKAIENMFFIIKSFEKASGLQINLHKSTVSGINLTDQRTSDI-TRFWG
Query: CGSHPLPIAYLGIPLGGT--PKNTQFWEPMIEKIQRRIQNWRFVS--LSKGGRLALIQS--GLQIW
I YLG+ L P + F E + E + R+ W+ + LS GR +I QIW
Subjt: CGSHPLPIAYLGIPLGGT--PKNTQFWEPMIEKIQRRIQNWRFVS--LSKGGRLALIQS--GLQIW
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| Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 1.6e-12 | 28.89 | Show/hide |
Query: LIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLAFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVL
LIPK N S++RPI++ +AL ++L ++LA+RL+ + + Q + R LL + + R +K ++ LDV KAFD +S I L
Subjt: LIPKKNMAGNISDFRPISLTTALYKILAKVLAERLKTTLGDTISLNQLAFVRKRQISDPILLANEAVDLWRVSKKKGVLIKLDVEKAFDKISWDFIDCVL
Query: LNKGYPNTWRDWIKACISSVSYSIILNGKP-------RGNIQAKIPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDISITHLLFADDILLFVQDDDK
G ++I +S + +I + R ++ PLSPFLF +D L L G+ G +G+ I L FADD+LL ++D+D
Subjt: LNKGYPNTWRDWIKACISSVSYSIILNGKP-------RGNIQAKIPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDISITHLLFADDILLFVQDDDK
Query: AIENMFFIIKSFEKASGLQINLHKS
+ + +F + G+ +N KS
Subjt: AIENMFFIIKSFEKASGLQINLHKS
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G43760.1 DNAse I-like superfamily protein | 3.0e-19 | 30.9 | Show/hide |
Query: WLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHE---PEWIVTNLDWAPI--NLDLASSLISPFREAEVFDCIKS
WL DGD N+ FFHKV A +N I L ++ + + + ++ ++ ++ + ++ + P+ + D P N LAS L + + E+ + +
Subjt: WLNDGDENSAFFHKVCTARHRRNQIHELISEEGISIVSDNMMETEVIKHFLAIYDANHE---PEWIVTNLDWAPI--NLDLASSLISPFREAEVFDCIKS
Query: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKIL
+ +NKA GPD FT +FF + W ++K S ++ +FF + N T I LIPK +S FRP+S T +YKI+
Subjt: IGQNKASGPDGFTIKFFKKFWNILKPSIMSVFHDFFHNKIANRVVNHTNIALIPKKNMAGNISDFRPISLTTALYKIL
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| AT4G20520.1 RNA binding;RNA-directed DNA polymerases | 9.8e-10 | 39.76 | Show/hide |
Query: LAERLKTTLGDTISLNQLAFVRKRQISDPILLANEAVDLWRVSKKKGV----LIKLDVEKAFDKISWDFIDCVLLNKGYPNTW
+ ERLK + + I Q +F+ R +D I+ EAV R +KKGV L+KLD+EKA+D+I WD+++ L++ G+P W
Subjt: LAERLKTTLGDTISLNQLAFVRKRQISDPILLANEAVDLWRVSKKKGV----LIKLDVEKAFDKISWDFIDCVLLNKGYPNTW
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| ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) | 1.1e-05 | 41.79 | Show/hide |
Query: ILNGKPRG------NIQAKIPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDIS--ITHLLFADD
I+NG P+G ++ PLSP+LF+L + LS L A+++G L G+ + + S I HLLFADD
Subjt: ILNGKPRG------NIQAKIPLSPFLFVLAMDYLSRLIEAAEKKGLLSGVVMGDIS--ITHLLFADD
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