; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g010230 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g010230
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR3-like
Genome locationChr04:41593693..41594765
RNA-Seq ExpressionLcy04g010230
SyntenyLcy04g010230
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595321.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4167.28Show/hide
Query:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAES--ISAFEEEEDGFRTPTSSDYKIPEVEQ
        MAS+F+EISLT         PESFRVKLEDA+Q +F+F AV NRP L S+SQ++          D SAP ES  ISA  ++EDG RTPTSSDYKIP VE 
Subjt:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAES--ISAFEEEEDGFRTPTSSDYKIPEVEQ

Query:  CPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDG
        CPPAPRRPKP+SLSRTSPRVSGVRRGFRVYISD+IV+SIFSSSF S  L  KNKK+RKDD G
Subjt:  CPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDG

KAG6603657.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3765.66Show/hide
Query:  MASEFQEIS-LT-PEISLTAI-APESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEV
        MAS FQEIS LT P IS TAI  P+SFRV L DA NQ DF+F A+N+ P LASDS        SV   DRSAP +SIS   +++DGFRTPTSSD+KIP V
Subjt:  MASEFQEIS-LT-PEISLTAI-APESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEV

Query:  EQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE
        +QCPPAPRRPKPIS SRT PR SGVRRGFRVYISD+I +SI    F   LLHQK KKARK+ +GGE
Subjt:  EQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE

XP_022950456.1 uncharacterized protein LOC111453550 [Cucurbita moschata]2.7e-3765.66Show/hide
Query:  MASEFQEIS-LT-PEISLTAI-APESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEV
        MAS FQEIS LT P IS TAI  P+SFRV L DA NQ DF+F A+N+ P LASDS        SV   DRSAP +SIS   +++DGFRTPTSSD+KIP V
Subjt:  MASEFQEIS-LT-PEISLTAI-APESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEV

Query:  EQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE
        +QCPPAPRRPKPIS SRT PR SGVRRGFRVYISD+I +SI    F   LLHQK KKARK+ +GGE
Subjt:  EQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE

XP_023518540.1 uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo]6.1e-4569.46Show/hide
Query:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAES--ISAFEEEEDGFRTPTSSDYKIPEVEQ
        MAS+F+EISLT         PESFRVKLEDA+Q +F+F AV NRP LA +SQ++          D SAP ES  ISA  ++EDGFRTPTSSDYKIP VE 
Subjt:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAES--ISAFEEEEDGFRTPTSSDYKIPEVEQ

Query:  CPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGEMKL
        CPPAPRRPKPISLSRTSPRVSGVRRGFRVYISD+IV+SIFSSSF S  L  KNKKARKDD GG+MKL
Subjt:  CPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGEMKL

XP_038877666.1 cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida]4.1e-3359.76Show/hide
Query:  MASEFQEISLT--PEISLTAIAPE-SFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVE
        MASEFQEISLT   +IS +AI P+ +FR+     NQ DF+F ++NN P                   DR APAESISA ++++DGFRTP SSD+KIP V 
Subjt:  MASEFQEISLT--PEISLTAIAPE-SFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVE

Query:  QCPPAPRRPKPISLSRTSP-RVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKN-KKARKDDD--GGE
         CPPAP+RPKPISLSRTS  R SGVRRGFRVYISD+IV+SI    F S LLHQK+ KKARKDDD  GGE
Subjt:  QCPPAPRRPKPISLSRTSP-RVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKN-KKARKDDD--GGE

TrEMBL top hitse value%identityAlignment
A0A0A0KZJ9 Uncharacterized protein1.3e-2149.4Show/hide
Query:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEE---DGFRTPTSSDYKIPEVE
        MASEFQEIS  P      +     ++ L   +  DF+F       D  S          S   + +  P  SISA ++++   DGF TP SS +KIP + 
Subjt:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEE---DGFRTPTSSDYKIPEVE

Query:  QCPPAPRRPKPISLSRT-SPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKN-KKARKDDDGG
         CPPAP RPKPISLSRT SPR SGVRRGF VYISD IV+SIFS      LLHQK+ KKARKDDD G
Subjt:  QCPPAPRRPKPISLSRT-SPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKN-KKARKDDDGG

A0A5A7SN91 Cyclin-dependent protein kinase inhibitor SMR3-like2.4e-2349.11Show/hide
Query:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVF----AAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEE---DGFRTPTSSDYKI
        M SEFQEIS  P + L        ++ L   +  DF+F    +++   P L S        SDS+    +  P  SISA +++E   DGF TP SS +KI
Subjt:  MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVF----AAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEE---DGFRTPTSSDYKI

Query:  PEVEQCPPAPRRPKPISLSRT-SPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGG
        P +  CPPAP RPKPISLSRT S R S VRRGF VYISD+IV+SIFS      LLH K+KKARKDDD G
Subjt:  PEVEQCPPAPRRPKPISLSRT-SPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGG

A0A5B6V783 Nucleophosmin-like3.4e-0949.4Show/hide
Query:  EEDGFRTPTSSDYKIPEVEQCPPAPRRPKPISLSR---TSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDD
        ++DGF+TPTS D+KIP ++QCPPAPR+PKP+S ++   +SP  SG  R       D  VES+F S   +   H+K KKARK+D
Subjt:  EEDGFRTPTSSDYKIPEVEQCPPAPRRPKPISLSR---TSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDD

A0A6J1CQ22 cyclin-dependent protein kinase inhibitor SMR2-like2.6e-3358.33Show/hide
Query:  MASEFQEISL--TPEISLTAIAPESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVE
        MAS FQEISL  +P+ISL +I+PESF + LEDA NQ DF+FA   N        Q+Q R  DS+                 ++DGFRTPTSSD+KIP ++
Subjt:  MASEFQEISL--TPEISLTAIAPESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVE

Query:  QCPPAPRRPKPISL--SRTSPRV-SGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE
        QCPPAPRRPKPIS    R+SPR+ SGVRRGFRVYISD+IVESIFSSSFA    HQK KKAR+DD   E
Subjt:  QCPPAPRRPKPISL--SRTSPRV-SGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE

A0A6J1GEW0 uncharacterized protein LOC1114535501.3e-3765.66Show/hide
Query:  MASEFQEIS-LT-PEISLTAI-APESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEV
        MAS FQEIS LT P IS TAI  P+SFRV L DA NQ DF+F A+N+ P LASDS        SV   DRSAP +SIS   +++DGFRTPTSSD+KIP V
Subjt:  MASEFQEIS-LT-PEISLTAI-APESFRVKLEDA-NQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEV

Query:  EQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE
        +QCPPAPRRPKPIS SRT PR SGVRRGFRVYISD+I +SI    F   LLHQK KKARK+ +GGE
Subjt:  EQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGE

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR31.7e-0543.21Show/hide
Query:  EEDGFRTPTSSDYKIPEVEQ--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DDIVESIFSSSFASHLLHQKNKKARK
        EE+G +TPTSSD+KIPEV+   CPPAPR+PKP   S T  +++ V    R+ I     +E  F        L ++ KK+RK
Subjt:  EEDGFRTPTSSDYKIPEVEQ--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DDIVESIFSSSFASHLLHQKNKKARK

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR27.0e-0438.2Show/hide
Query:  SQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVEQCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDDIVESIF
        SQ +  H DS             S  EE  +   TPTSSD+KIPEVE CPP PR RP+ ISL++ +     +R      +    VE++F
Subjt:  SQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVEQCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDDIVESIF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein5.0e-0538.2Show/hide
Query:  SQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVEQCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDDIVESIF
        SQ +  H DS             S  EE  +   TPTSSD+KIPEVE CPP PR RP+ ISL++ +     +R      +    VE++F
Subjt:  SQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVEQCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDDIVESIF

AT5G02420.1 unknown protein1.2e-0643.21Show/hide
Query:  EEDGFRTPTSSDYKIPEVEQ--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DDIVESIFSSSFASHLLHQKNKKARK
        EE+G +TPTSSD+KIPEV+   CPPAPR+PKP   S T  +++ V    R+ I     +E  F        L ++ KK+RK
Subjt:  EEDGFRTPTSSDYKIPEVEQ--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DDIVESIFSSSFASHLLHQKNKKARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAGAATTCCAAGAAATCTCCCTCACGCCAGAGATTTCCTTGACCGCGATTGCGCCAGAATCATTCCGCGTCAAATTGGAGGATGCGAACCAGAACGACTTCGT
TTTCGCTGCTGTGAACAATCGTCCTGATCTCGCCTCGGATTCTCAACGACAAGGCCGCCATTCCGATTCCGTCGACGGAGCCGATCGCTCCGCTCCAGCAGAGTCGATCT
CCGCCTTCGAGGAGGAGGAGGACGGTTTCAGAACGCCGACCTCTTCGGATTATAAGATTCCAGAGGTGGAACAGTGTCCGCCGGCGCCTCGAAGACCGAAACCGATCTCG
TTGTCGAGAACGTCGCCGAGAGTTTCCGGCGTTCGCAGAGGTTTCAGAGTGTATATCTCAGACGACATCGTCGAGTCGATCTTCTCGTCCAGTTTCGCCTCCCATTTGCT
GCACCAGAAGAACAAGAAAGCTCGGAAGGACGACGATGGCGGTGAAATGAAATTATGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTTCTCTGACAAAATCACACCCCATTTTCTAAGCTACGCAGCTCAATCAAAATCAACCAACCTCCATTTCATAAATCATCCATCCCCTTCTTCCTTTCTCCAT
CATTCAATCTTTATCGTCCTCATCATGGCCTCAGAATTCCAAGAAATCTCCCTCACGCCAGAGATTTCCTTGACCGCGATTGCGCCAGAATCATTCCGCGTCAAATTGGA
GGATGCGAACCAGAACGACTTCGTTTTCGCTGCTGTGAACAATCGTCCTGATCTCGCCTCGGATTCTCAACGACAAGGCCGCCATTCCGATTCCGTCGACGGAGCCGATC
GCTCCGCTCCAGCAGAGTCGATCTCCGCCTTCGAGGAGGAGGAGGACGGTTTCAGAACGCCGACCTCTTCGGATTATAAGATTCCAGAGGTGGAACAGTGTCCGCCGGCG
CCTCGAAGACCGAAACCGATCTCGTTGTCGAGAACGTCGCCGAGAGTTTCCGGCGTTCGCAGAGGTTTCAGAGTGTATATCTCAGACGACATCGTCGAGTCGATCTTCTC
GTCCAGTTTCGCCTCCCATTTGCTGCACCAGAAGAACAAGAAAGCTCGGAAGGACGACGATGGCGGTGAAATGAAATTATGATCTCGTGCTTCTTCCGGCGTTCGCAGAG
GTTTCAGAGTAGTCTATTGTCTCCTCCGACATATGAAATCGTCGAGGCGATTTTCTCTTCCAGTTTCTGCTCCGATTTGCTGCACCAGAAGACTGAGAAAGCTCGGAAGG
ACGATCATGGCGGCGAATGAAACTATACTGTTAGTTTCTCTGTTGATTAATTAACTGATAATTTTGTCCTTAGATGAAAATGATCCTAAGATCCAAAACGAGGACGAACA
GTAGACCAGTAACAAACAAAAGCCATGATAGATGTGAAGTTCCACGTATTTTCTTGTGTTTGTGCCTAGTTAAGAACGCCTTTTTGCTCCTCAAAAGGAAGAATTTGGAT
ATTCCGTATGGGTTCGATAGTCAATTATGTGATCCTAGATTTTGATCTTTTAATAGTTTATTCATACATTTCAAAGCCTACAA
Protein sequenceShow/hide protein sequence
MASEFQEISLTPEISLTAIAPESFRVKLEDANQNDFVFAAVNNRPDLASDSQRQGRHSDSVDGADRSAPAESISAFEEEEDGFRTPTSSDYKIPEVEQCPPAPRRPKPIS
LSRTSPRVSGVRRGFRVYISDDIVESIFSSSFASHLLHQKNKKARKDDDGGEMKL