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Lcy04g010790 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g010790
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDNA-binding protein S1FA
Genome locationChr04:42145865..42147153
RNA-Seq ExpressionLcy04g010790
SyntenyLcy04g010790
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KDO48103.1 hypothetical protein CISIN_1g044991mg [Citrus sinensis]2.9e-2672.92Show/hide
Query:  FCNSFLLVYVL-VHVISSKIGLGAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        FCN F  VY+  V   + K     QGN ++DA A+GFNPGLIVLLVVGGLLL FL+GNY LYMYAQKTLPPKKKKPVSKKKMK+ERLKQG+SAPGE
Subjt:  FCNSFLLVYVL-VHVISSKIGLGAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_004143239.1 DNA-binding protein S1FA [Cucumis sativus]2.2e-2692.96Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        GN IRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_022143745.1 DNA-binding protein S1FA-like [Momordica charantia]8.3e-2692.96Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        G  IRDADA GFNPGL+VLLVVGGLLLAFLVGNYALY+YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_022962636.1 DNA-binding protein S1FA-like [Cucurbita moschata]3.7e-2692.96Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        GN IR+ADARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KKPVSKKKMKRERLKQGISAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_038881351.1 DNA-binding protein S1FA-like [Benincasa hispida]2.0e-2797.18Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        GN IRDADARGFNPGLIVLLVVGGLLLAFL GNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

TrEMBL top hitse value%identityAlignment
A0A067DZ38 Uncharacterized protein1.4e-2672.92Show/hide
Query:  FCNSFLLVYVL-VHVISSKIGLGAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        FCN F  VY+  V   + K     QGN ++DA A+GFNPGLIVLLVVGGLLL FL+GNY LYMYAQKTLPPKKKKPVSKKKMK+ERLKQG+SAPGE
Subjt:  FCNSFLLVYVL-VHVISSKIGLGAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A0A0KEM3 DNA-binding protein S1FA1.1e-2692.96Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        GN IRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A5A7TZ88 DNA-binding protein S1FA-like5.3e-2692.86Show/hide
Query:  NGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        N IRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  NGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A6J1CPM9 DNA-binding protein S1FA-like4.0e-2692.96Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        G  IRDADA GFNPGL+VLLVVGGLLLAFLVGNYALY+YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A6J1HDT2 DNA-binding protein S1FA-like1.8e-2692.96Show/hide
Query:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        GN IR+ADARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KKPVSKKKMKRERLKQGISAPGE
Subjt:  GNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

SwissProt top hitse value%identityAlignment
P42551 DNA-binding protein S1FA11.4e-2075.38Show/hide
Query:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        A+A+G NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKKPVSKKK+KRE+LKQG+  PGE
Subjt:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

P42552 DNA-binding protein S1FA1.5e-2275Show/hide
Query:  IRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        + + +A+G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPPKKKKP+SKKKMKRERLKQG++ PGE
Subjt:  IRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

P42553 DNA-binding protein S1FA11.9e-2080.65Show/hide
Query:  RGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        +G NPG IVLLVV  LL+ F VGNYALYMYAQKTLPP+KKKPVSKKK+KRE+LKQG+SAPGE
Subjt:  RGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Q42337 DNA-binding protein S1FA21.4e-2064.86Show/hide
Query:  GAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        G+ G  +   +A+G NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKKP+SKKK+KRE+LKQG+  PGE
Subjt:  GAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Q93VI0 DNA-binding protein S1FA32.4e-2073.44Show/hide
Query:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        +++G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQG+  PGE
Subjt:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein1.0e-2164.86Show/hide
Query:  GAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        G+ G  +   +A+G NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKKP+SKKK+KRE+LKQG+  PGE
Subjt:  GAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

AT3G09735.1 S1FA-like DNA-binding protein1.7e-2173.44Show/hide
Query:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        +++G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQG+  PGE
Subjt:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

AT3G53370.1 S1FA-like DNA-binding protein1.0e-2175.38Show/hide
Query:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        A+A+G NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKKPVSKKK+KRE+LKQG+  PGE
Subjt:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

AT3G53370.2 S1FA-like DNA-binding protein4.2e-0772.73Show/hide
Query:  YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        +A K LPP+KKKPVSKKK+KRE+LKQG+  PGE
Subjt:  YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCTTCTGCAATTCATTTCTTCTTGTGTATGTTCTAGTTCATGTGATCAGCAGTAAAATTGGCCTTGGTGCACAGGGAAACGGGATTAGAGATGCAGAT
GCAAGAGGATTCAATCCAGGACTGATTGTGCTTCTTGTAGTCGGTGGACTGCTCTTGGCTTTTCTTGTTGGGAATTACGCTCTGTACATGTATGCGCAGAAGACC
CTCCCACCAAAAAAGAAGAAACCAGTTTCCAAGAAGAAGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
CCGCTTCTGAATTTCAGCCATGGAAGACGATTTCGAGTTCGGTGACAAAGTCCCACCGGCCGTCAATCGCATGTGCATGAGATTGCTGAAGAAACAAACAGCTTC
CTTTCTGGGGGACCTTAAAATGGCTCATGAGTTCCTTCTGCAATTCATTTCTTCTTGTGTATGTTCTAGTTCATGTGATCAGCAGTAAAATTGGCCTTGGTGCAC
AGGGAAACGGGATTAGAGATGCAGATGCAAGAGGATTCAATCCAGGACTGATTGTGCTTCTTGTAGTCGGTGGACTGCTCTTGGCTTTTCTTGTTGGGAATTACG
CTCTGTACATGTATGCGCAGAAGACCCTCCCACCAAAAAAGAAGAAACCAGTTTCCAAGAAGAAGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTG
GAGAGTAG
Protein sequenceShow/hide protein sequence
MSSFCNSFLLVYVLVHVISSKIGLGAQGNGIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE