CuGenDBv2

Gene ID	Lcy04g011060
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	HTH myb-type domain-containing protein
Genome location	Chr04:42484139..42490749
RNA-Seq Expression	Lcy04g011060
Synteny	Lcy04g011060
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008449224.1 PREDICTED: uncharacterized protein LOC103491166 isoform X1 [Cucumis melo]

3.7e-53

91.96

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLPAPLN+SNEVE LLVE KS+HVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGD DQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

XP_008449227.1 PREDICTED: uncharacterized protein LOC103491166 isoform X3 [Cucumis melo]

3.7e-53

91.96

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLPAPLN+SNEVE LLVE KS+HVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGD DQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

XP_011657653.1 uncharacterized protein LOC101219571 isoform X1 [Cucumis sativus]

8.1e-53

91.07

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Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLP PLN+SNEVE LLVE KS+HVLG+CLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

XP_031742605.1 uncharacterized protein LOC101219571 isoform X3 [Cucumis sativus]

8.1e-53

91.07

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLP PLN+SNEVE LLVE KS+HVLG+CLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

XP_038881569.1 uncharacterized protein LOC120073047 isoform X3 [Benincasa hispida]

9.0e-52

91.96

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Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNG-GGLDSNSKQGGEHELKFGDLDQLLDDANE
        MDQEVHFC KFTNMKSHWV+VE  FLPAPLN+SNEVE LLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNG GGLDSNSKQGGEHELKFGDLDQLLDDANE
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNG-GGLDSNSKQGGEHELKFGDLDQLLDDANE

Query:  VEEFHATNNLPN
        V EFHATNNL N
Subjt:  VEEFHATNNLPN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKX9 uncharacterized protein LOC103491166 isoform X1

1.8e-53

91.96

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLPAPLN+SNEVE LLVE KS+HVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGD DQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

A0A1S3BLJ8 uncharacterized protein LOC103491166 isoform X3

1.8e-53

91.96

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLPAPLN+SNEVE LLVE KS+HVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGD DQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

A0A1S3BLK0 uncharacterized protein LOC103491166 isoform X2

1.7e-51

91.07

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKVE  FLPAPLN+SNEVE LLVE KS+HVLGNCLRVQDFSCDFGYGIQTN GGLDSNSKQGGEHELKFGD DQLLDDANEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
         EFHATNNLPNT
Subjt:  EEFHATNNLPNT

A0A6J1CRG2 uncharacterized protein LOC111013581 isoform X2

1.4e-50

88.39

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Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKV+ SFLPAPLNE NEVEHLLVEPKS+HVLG+CLR QDFSCDF YGIQTN GGLDSNSKQ GEHELKF DLDQLL D NEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
        EEFHATNNLPNT
Subjt:  EEFHATNNLPNT

A0A6J1CRQ1 uncharacterized protein LOC111013581 isoform X1

1.4e-50

88.39

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV
        MDQEVHFC KFTNMKSHWVKV+ SFLPAPLNE NEVEHLLVEPKS+HVLG+CLR QDFSCDF YGIQTN GGLDSNSKQ GEHELKF DLDQLL D NEV
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEV

Query:  EEFHATNNLPNT
        EEFHATNNLPNT
Subjt:  EEFHATNNLPNT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G37025.1 TRF-like 8

1.1e-04

26.45

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHV------------LGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFG
        M+    F   F   KS    V+E+   +  ++ ++++H L++P  D+             +G   ++++FS  F      + GG+++ S Q  E  LKF 
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHV------------LGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFG

Query:  DLDQLLDDANEVEEFHATNNL
         LD +LD  +EVE+ +A++ L
Subjt:  DLDQLLDDANEVEEFHATNNL

AT2G37025.2 TRF-like 8

1.1e-04

26.45

Show/hide

Query:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHV------------LGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFG
        M+    F   F   KS    V+E+   +  ++ ++++H L++P  D+             +G   ++++FS  F      + GG+++ S Q  E  LKF 
Subjt:  MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHV------------LGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFG

Query:  DLDQLLDDANEVEEFHATNNL
         LD +LD  +EVE+ +A++ L
Subjt:  DLDQLLDDANEVEEFHATNNL

Sequences

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CDS sequence

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ATGGATCAAGAAGTGCATTTCTGCCCGAAGTTCACAAATATGAAATCTCATTGGGTAAAAGTGGAGGAATCTTTTCTTCCTGCACCATTAAATGAATCAAATGAA
GTTGAGCATTTACTTGTGGAGCCTAAAAGCGACCATGTTTTAGGAAATTGCTTAAGAGTTCAAGATTTCTCTTGTGACTTTGGCTATGGAATACAAACAAACGGT
GGTGGATTGGATTCTAATAGCAAGCAGGGAGGCGAACATGAACTTAAATTTGGAGATCTTGATCAACTGCTGGATGATGCCAATGAAGTAGAGGAATTCCATGCA
ACAAACAATCTGCCAAATACATGTGAAGTTTATCTTTTCATTATATATAATTTTTTGTTAGTTTTTGTGTCGTTATAA

mRNA sequence

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Protein sequence

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MDQEVHFCPKFTNMKSHWVKVEESFLPAPLNESNEVEHLLVEPKSDHVLGNCLRVQDFSCDFGYGIQTNGGGLDSNSKQGGEHELKFGDLDQLLDDANEVEEFHA
TNNLPNTCEVYLFIIYNFLLVFVSL

Lcy04g011060 (gene) of Sponge gourd (P93075) v1 genome