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Lcy04g012400 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g012400
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionThreonine dehydratase
Genome locationChr04:44156417..44158437
RNA-Seq ExpressionLcy04g012400
SyntenyLcy04g012400
Gene Ontology termsGO:0006567 - threonine catabolic process (biological process)
GO:0009097 - isoleucine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004794 - L-threonine ammonia-lyase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsIPR001721 - Threonine dehydratase, ACT-like domain
IPR038110 - Threonine dehydratase, ACT-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595194.1 Threonine dehydratase biosynthetic, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6076.62Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLY+VGMHMPSELE+MK RM+++QLET NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV LQID+SDM EFHERAR++ Y+YVVVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

XP_022143973.1 threonine dehydratase biosynthetic, chloroplastic [Momordica charantia]1.8e-6278.57Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLYSVGMHMPSELE+MKKRM+S+QLET NLTNN+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV  QID+S+M EFHERAR+VGY+Y+VVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

XP_022962981.1 threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita moschata]2.9e-6076.62Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLY+VGMHMPSELE+MK RM+++QLET NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV LQID+SDM EFHERAR++ Y+YVVVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

XP_023517868.1 threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita pepo subsp. pepo]2.9e-6076.62Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLY+VGMHMPSELE+MK RM+++QLET NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV LQID+SDM EFHERAR++ Y+YVVVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

XP_038881616.1 threonine dehydratase biosynthetic, chloroplastic-like isoform X1 [Benincasa hispida]9.9e-6175Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLYSVG+HMPSELE+MK RMESAQLET NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDA SPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL--RRPS
        NI+LFHY+ +GET  NILV LQI++SDM EFHER R+VGY+YVVVT+DG+F+LL   RPS
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL--RRPS

TrEMBL top hitse value%identityAlignment
A0A0A0KII4 Threonine dehydratase1.2e-5973.75Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLYSVG+HMPSELE+MK RMES+QL T NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDA SPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL--RRPS
        NI+LFHY+ +GET  NILV LQI++ DM EFHERAR+VGY+YVVVT+DG+F+LL   RPS
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL--RRPS

A0A5A7SGN7 Threonine dehydratase2.6e-5974.68Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLYSVG+HMPSELE+MK RMES+QL T NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDA SPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NI+LFHY+ +GET  NILV LQI++ DM EFHERAR+VGY+YVVVT+DG+F+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

A0A6J1CS14 Threonine dehydratase8.8e-6378.57Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLYSVGMHMPSELE+MKKRM+S+QLET NLTNN+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV  QID+S+M EFHERAR+VGY+Y+VVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

A0A6J1HES9 Threonine dehydratase1.4e-6076.62Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLY+VGMHMPSELE+MK RM+++QLET NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV LQID+SDM EFHERAR++ Y+YVVVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

A0A6J1I5D4 Threonine dehydratase1.4e-6076.62Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNITEFKY+Y  EKEAVVLY+VGMHMPSELE+MK RM+++QLET NLT N+LVKDHLRY++     GGKSN ENEVLC FIFPER GAL+KFLDAFSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NISLFHYR +GET  NILV LQID+SDM EFHERAR++ Y+YVVVT+DGVF+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

SwissProt top hitse value%identityAlignment
A0FKE6 Threonine dehydratase 1 biosynthetic, chloroplastic1.8e-4456.77Show/hide
Query:  MNITEFKYKYYPEKE-AVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR
        MNITEFKY+Y  +KE A+VLYSVG+H   ELE M +RMESA L+T NLT+N+LVKDHLR+++     GG++N  NE+LC F FPE+ GAL KFLDAFSPR
Subjt:  MNITEFKYKYYPEKE-AVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR

Query:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        WNISLFHYR +G+T  N+LV +Q+   ++ EF  RA  +GYEY + + +  ++L+
Subjt:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

P25306 Threonine dehydratase 2 biosynthetic, chloroplastic1.8e-2840.65Show/hide
Query:  MNITEFKYKYYPE-KEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR
        +N TE  Y++  E K A++LY V +   S+LE M + M+S+ + T NL++N LV DHL+++V     GG +N  +E+   FI PE+   L+ FLDAFSPR
Subjt:  MNITEFKYKYYPE-KEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR

Query:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        WNI+L  YR +G+ + ++L+  Q+ +++MDEF  +A K+GY Y +   +  F L+
Subjt:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

P31212 Threonine dehydratase biosynthetic, chloroplastic (Fragment)1.5e-3041.94Show/hide
Query:  MNITEFKYKYYPE-KEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR
        MNITE  Y++  E KEA+VLY V +   S+LE+M K++ S+ ++T N ++N LV +H++++V     GG ++  +E+   FIFPE+ G L  FL+AFSPR
Subjt:  MNITEFKYKYYPE-KEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR

Query:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        WNI+L  YR +G+ + N+LV  Q+ +S+MDEF  +A  +GY Y +   +  F ++
Subjt:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

Q9AXU4 Threonine dehydratase3.3e-4354.19Show/hide
Query:  MNITEFKYKYYP-EKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR
        MNITEFKY+Y    K+A+VLYSVG++  S+LE M +RM+S+QL T NLTNNNLVK+HLR+++     GG+S   NE+ C FIFPE+ GAL+KFLDAFSPR
Subjt:  MNITEFKYKYYP-EKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPR

Query:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        WNISLFHYR++GE D ++LV  Q+ + +++EF  +A  +GY Y + + +   +L+
Subjt:  WNISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

Q9ZSS6 Threonine dehydratase biosynthetic, chloroplastic7.7e-4859.09Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNI+EFKY+   EKEAVVLYSVG+H   EL+ ++KRMES+QL+T NLT ++LVKDHLRY++     GG+S   +EVLC F FPER GAL  FLD+FSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NI+LFHYR +GET  N+LV +Q+ E +M+EF  RA+ +GY+Y +V++D  F+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL

Arabidopsis top hitse value%identityAlignment
AT3G10050.1 L-O-methylthreonine resistant 15.4e-4959.09Show/hide
Query:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW
        MNI+EFKY+   EKEAVVLYSVG+H   EL+ ++KRMES+QL+T NLT ++LVKDHLRY++     GG+S   +EVLC F FPER GAL  FLD+FSPRW
Subjt:  MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRW

Query:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL
        NI+LFHYR +GET  N+LV +Q+ E +M+EF  RA+ +GY+Y +V++D  F+LL
Subjt:  NISLFHYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATTACTGAATTCAAGTACAAATATTACCCTGAAAAAGAGGCTGTTGTTCTTTATAGTGTTGGTATGCATATGCCTTCAGAACTTGAAGACATGAAGAAG
AGGATGGAATCTGCTCAACTTGAAACTGATAATCTCACAAATAATAATCTTGTTAAGGATCACTTGCGCTATATGGTAAATATTCTTTCCAATGGGGGCAAATCA
AACGCTGAAAACGAAGTTCTCTGTCATTTTATTTTCCCAGAAAGACGGGGTGCTCTACAGAAGTTCTTAGATGCTTTCAGTCCTCGTTGGAACATTAGTTTGTTT
CACTATCGAAAGGAAGGTGAAACTGATACAAATATATTAGTGGCACTTCAGATTGATGAATCAGATATGGATGAATTCCATGAACGTGCTAGGAAGGTTGGCTAT
GAGTATGTTGTAGTAACCGAAGATGGTGTCTTTGAACTTCTCAGGCGCCCGTCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATTACTGAATTCAAGTACAAATATTACCCTGAAAAAGAGGCTGTTGTTCTTTATAGTGTTGGTATGCATATGCCTTCAGAACTTGAAGACATGAAGAAG
AGGATGGAATCTGCTCAACTTGAAACTGATAATCTCACAAATAATAATCTTGTTAAGGATCACTTGCGCTATATGGTAAATATTCTTTCCAATGGGGGCAAATCA
AACGCTGAAAACGAAGTTCTCTGTCATTTTATTTTCCCAGAAAGACGGGGTGCTCTACAGAAGTTCTTAGATGCTTTCAGTCCTCGTTGGAACATTAGTTTGTTT
CACTATCGAAAGGAAGGTGAAACTGATACAAATATATTAGTGGCACTTCAGATTGATGAATCAGATATGGATGAATTCCATGAACGTGCTAGGAAGGTTGGCTAT
GAGTATGTTGTAGTAACCGAAGATGGTGTCTTTGAACTTCTCAGGCGCCCGTCGAGTTAAACGTCAACTCATTGTCTATCCATGAGAAAGAGCAAAAACTATCAA
ACTACTTGTACGTGTTTTTGGGATGAAATTTTGTAAATAGTTTATTTGAACTAGATGTTATTTTATTGCTTATTTCATGTTGAAATTCAAATTTAATAATAAGT
Protein sequenceShow/hide protein sequence
MNITEFKYKYYPEKEAVVLYSVGMHMPSELEDMKKRMESAQLETDNLTNNNLVKDHLRYMVNILSNGGKSNAENEVLCHFIFPERRGALQKFLDAFSPRWNISLF
HYRKEGETDTNILVALQIDESDMDEFHERARKVGYEYVVVTEDGVFELLRRPSS