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Lcy04g013460 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g013460
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonucleoside-diphosphate reductase
Genome locationChr04:45488247..45488762
RNA-Seq ExpressionLcy04g013460
SyntenyLcy04g013460
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR000788 - Ribonucleotide reductase large subunit, C-terminal
IPR039718 - Ribonucleoside-diphosphate reductase large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595105.1 Ribonucleoside-diphosphate reductase large subunit, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4391.58Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACG
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACG
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACG

KAG7027121.1 Ribonucleoside-diphosphate reductase large subunit [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4391.67Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

XP_022963223.1 ribonucleoside-diphosphate reductase large subunit [Cucurbita moschata]1.9e-4391.67Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

XP_023003073.1 ribonucleoside-diphosphate reductase large subunit [Cucurbita maxima]1.9e-4391.67Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

XP_023518693.1 ribonucleoside-diphosphate reductase large subunit [Cucurbita pepo subsp. pepo]1.9e-4391.67Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

TrEMBL top hitse value%identityAlignment
A0A6J1BYB7 Ribonucleoside-diphosphate reductase3.6e-4393.75Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIH+DQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLK EKA++EDDSTKMAQMVCSLTNRE+CLACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

A0A6J1D3E8 Ribonucleoside-diphosphate reductase1.0e-4292.71Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIH+DQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLK EK ++EDDSTKMAQMVCSLTNRE+CLACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

A0A6J1HH47 Ribonucleoside-diphosphate reductase9.4e-4491.67Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

A0A6J1IUQ6 Ribonucleoside-diphosphate reductase1.1e-4190.62Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIH+DQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLK EK ++EDDSTKMA+MVCSLTNRE+C ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

A0A6J1KVF2 Ribonucleoside-diphosphate reductase9.4e-4491.67Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS
        MAVDRGCYIDQ+QSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLR+RAAADAIKFTVDTSMLKEEK   ED+STKMAQMVCSLTNRE+C+ACGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS

SwissProt top hitse value%identityAlignment
P07742 Ribonucleoside-diphosphate reductase large subunit4.1e-2861.62Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE-EKASNEDDSTK--MAQMVCSLTNREDCLACGS
        MA +RG +IDQ+QSLNIHI +PN+GKLTS+HFY W +GLKTGMYYLR+R AA+ I+FT++   LK+ EKA  E++  +   A MVCSL NRE+CL CGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE-EKASNEDDSTK--MAQMVCSLTNREDCLACGS

P23921 Ribonucleoside-diphosphate reductase large subunit5.3e-2860.61Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE-EKASNEDDSTK--MAQMVCSLTNREDCLACGS
        MA +RG +IDQ+QSLNIHI +PN+GKLTS+HFY W +GLKTGMYYLR+R AA+ I+FT++   LK+ EK S E++  +   A MVCSL NR++CL CGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE-EKASNEDDSTK--MAQMVCSLTNREDCLACGS

P79732 Ribonucleoside-diphosphate reductase large subunit1.4e-2861.39Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE--EKASNEDDSTK---MAQMVCSLTNREDCLACG
        MA DRG YIDQ+QSLNIHI +PN+GKLTS+HFY W +GLKTGMYYLR++  A+ I+FT++   LKE  +  S+ED+ TK    A MVCSL NR +CL CG
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE--EKASNEDDSTK---MAQMVCSLTNREDCLACG

Query:  S
        S
Subjt:  S

Q5R919 Ribonucleoside-diphosphate reductase large subunit5.3e-2860.61Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE-EKASNEDDSTK--MAQMVCSLTNREDCLACGS
        MA +RG +IDQ+QSLNIHI +PN+GKLTS+HFY W +GLKTGMYYLR+R AA+ I+FT++   LK+ EK S E++  +   A MVCSL NR++CL CGS
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE-EKASNEDDSTK--MAQMVCSLTNREDCLACGS

Q9SJ20 Ribonucleoside-diphosphate reductase large subunit8.7e-3975Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE--------EKASNEDDSTKMAQMVCSLTNREDCL
        MA DRGCYIDQ+QSLNIH+D+PNF KLTSLHFY W KGLKTGMYYLRSRAAADAIKFTVDT+MLKE        ++   ED+ TK+AQMVCSLTN E+CL
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE--------EKASNEDDSTKMAQMVCSLTNREDCL

Query:  ACGS
        ACGS
Subjt:  ACGS

Arabidopsis top hitse value%identityAlignment
AT2G21790.1 ribonucleotide reductase 16.2e-4075Show/hide
Query:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE--------EKASNEDDSTKMAQMVCSLTNREDCL
        MA DRGCYIDQ+QSLNIH+D+PNF KLTSLHFY W KGLKTGMYYLRSRAAADAIKFTVDT+MLKE        ++   ED+ TK+AQMVCSLTN E+CL
Subjt:  MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKE--------EKASNEDDSTKMAQMVCSLTNREDCL

Query:  ACGS
        ACGS
Subjt:  ACGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCGATCGAGGATGCTACATCGACCAAAATCAGAGCCTCAATATCCACATAGATCAACCAAATTTTGGAAAACTCACTTCCTTGCACTTCTATGCGTGG
TCAAAGGGTTTAAAAACTGGAATGTATTATCTGAGATCACGTGCTGCAGCTGATGCCATCAAATTTACAGTTGATACATCAATGCTAAAGGAGGAAAAGGCTAGC
AATGAAGATGATAGTACAAAAATGGCACAGATGGTATGTTCTCTAACAAATCGTGAGGATTGCTTGGCCTGTGGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCGATCGAGGATGCTACATCGACCAAAATCAGAGCCTCAATATCCACATAGATCAACCAAATTTTGGAAAACTCACTTCCTTGCACTTCTATGCGTGG
TCAAAGGGTTTAAAAACTGGAATGTATTATCTGAGATCACGTGCTGCAGCTGATGCCATCAAATTTACAGTTGATACATCAATGCTAAAGGAGGAAAAGGCTAGC
AATGAAGATGATAGTACAAAAATGGCACAGATGGTATGTTCTCTAACAAATCGTGAGGATTGCTTGGCCTGTGGAAGTTAA
Protein sequenceShow/hide protein sequence
MAVDRGCYIDQNQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLKEEKASNEDDSTKMAQMVCSLTNREDCLACGS