CuGenDBv2

Gene ID	Lcy04g016200
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Methylmalonate-semialdehyde dehydrogenase (CoA acylating)
Genome location	Chr04:48478445..48479035
RNA-Seq Expression	Lcy04g016200
Synteny	Lcy04g016200
Gene Ontology terms	GO:0004491 - methylmalonate-semialdehyde dehydrogenase (acylating) activity (molecular function)
InterPro domains	IPR010061 - Methylmalonate-semialdehyde dehydrogenase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022978814.1 uncharacterized protein LOC111478665 isoform X1 [Cucurbita maxima]

2.7e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

XP_022978818.1 uncharacterized protein LOC111478665 isoform X2 [Cucurbita maxima]

2.7e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

XP_023543654.1 uncharacterized protein LOC111803473 isoform X1 [Cucurbita pepo subsp. pepo]

2.7e-92

96.07

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Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

XP_023543660.1 uncharacterized protein LOC111803473 isoform X3 [Cucurbita pepo subsp. pepo]

2.7e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

XP_023543661.1 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like isoform X4 [Cucurbita pepo subsp. pepo]

2.7e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T2N5 Methylmalonate-semialdehyde dehydrogenase (CoA acylating)

2.5e-91

91.89

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQ QTGL+AQKKM PPQPGRFEDRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKID+S RKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGFLMYLL
        MLTIKNG+HNHE LKD SEHPYSRRFTEDEV+QIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSG+ + LL
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGFLMYLL

A0A5D3CMU2 Methylmalonate-semialdehyde dehydrogenase (CoA acylating)

2.5e-91

91.89

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQ QTGL+AQKKM PPQPGRFEDRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKID+S RKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGFLMYLL
        MLTIKNG+HNHE LKD SEHPYSRRFTEDEV+QIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSG+ + LL
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGFLMYLL

A0A6J1IRA8 Methylmalonate-semialdehyde dehydrogenase (CoA acylating)

1.3e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

A0A6J1IUC7 Methylmalonate-semialdehyde dehydrogenase (CoA acylating)

1.3e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

A0A6J1IV39 Methylmalonate-semialdehyde dehydrogenase (CoA acylating)

1.3e-92

96.07

Show/hide

Query:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
        MGTQSQTGL+A KKMLPPQPGRF+DRE+LIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGG+YRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW
Subjt:  MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAW

Query:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
        MLTIKNGDHNHE LKDMSEHPYSRRFTEDEVRQIK MTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS
Subjt:  MLTIKNGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLS

SwissProt top hits

e value

%identity

Alignment

Q2HEW5 PKS-NRPS hybrid synthetase cheA

3.8e-04

24.59

Show/hide

Query:  FEDREELIKYVRDFGADQGYVVTIKKSRKDR-----RVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAWML----TIKNGDHNHEA
        F   EEL   +  +   +G+ V  +  R  +     R  + CDR G  R  R        R+ ++R  +C ++A   +  D W        ++  HNH  
Subjt:  FEDREELIKYVRDFGADQGYVVTIKKSRKDR-----RVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAWML----TIKNGDHNHEA

Query:  LKDMSEHPYSRRFTEDEVRQIKQMT-EAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGF-----LMYLLSSFDG
            S H   R    + +  I +++  A I+ R++   + Q + D   T + +YN++AK+R+ NL G+     L+  L + DG
Subjt:  LKDMSEHPYSRRFTEDEVRQIKQMT-EAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGF-----LMYLLSSFDG

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAACTCAAAGTCAAACAGGATTAATAGCACAAAAGAAGATGCTTCCTCCTCAACCTGGAAGATTTGAAGATCGTGAAGAACTCATTAAATATGTCCGTGAT
TTTGGTGCCGATCAAGGATATGTGGTAACAATTAAGAAGTCTAGGAAAGATAGAAGGGTTATCCTTGGTTGTGATAGAGGAGGTGTGTACCGTAACAGGCGTAAG
ATTGATGAGAGTCGGCGCAAAAGGAAAGCAAGCTCACGCTTGATAAATTGCCCATTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAA
AATGGGGACCATAACCATGAGGCCTTAAAAGACATGTCAGAGCATCCATACAGTCGCCGTTTTACTGAGGACGAAGTAAGGCAAATAAAACAGATGACTGAAGCT
GGTATAAAACCACGTCAGGTCCTTAAAGCTCTCAAGCAACACAATCCAGATCTGCAGTCAACACCAAGGCATTTGTACAACCTCAAAGCCAAAATTCGCCAAGGA
AATCTATCAGGTTTTCTCATGTATCTACTATCTAGCTTTGATGGAAAAAGATTCATTGGTTGTTAA

mRNA sequence

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Protein sequence

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MGTQSQTGLIAQKKMLPPQPGRFEDREELIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESRRKRKASSRLINCPFEAIGKKEDDAWMLTIK
NGDHNHEALKDMSEHPYSRRFTEDEVRQIKQMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSGFLMYLLSSFDGKRFIGC

Lcy04g016200 (gene) of Sponge gourd (P93075) v1 genome