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Lcy04g018180 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g018180
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationChr04:50113794..50114444
RNA-Seq ExpressionLcy04g018180
SyntenyLcy04g018180
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4395942.1 hypothetical protein F8388_013111 [Cannabis sativa]2.4e-2531.63Show/hide
Query:  WYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARK
        W     G+Y+V SGY         +  S+   ++ WW F W+ ++  K K+F WR+F+  LPT+  L +RG+ L+  C  C+ K E   HA+W C    K
Subjt:  WYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARK

Query:  TWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVW-EWVTNYLTQFQGFLCRSARAQGEIAEGQLGWQ
         W+ + F+ ++++H    A DVLF     L +ED  +F+ L W IW +RN  +F       ++ + W  W    L  F G  C+  R Q      +  W 
Subjt:  TWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVW-EWVTNYLTQFQGFLCRSARAQGEIAEGQLGWQ

Query:  PPIYHFLTLNTDATI
        PP    + +NTDA++
Subjt:  PPIYHFLTLNTDATI

TXG67924.1 hypothetical protein EZV62_009199 [Acer yangbiense]2.4e-2530.18Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHS---SGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECK
        +W+++K G Y+VRSGY L   ++ S    G  D +    WW   W  +IP KV  F W+   + LPT  NL RRGV  +  CP C  + ET +H +W C 
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHS---SGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECK

Query:  WARKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGFLCRS---ARAQGEIAE
        W RK+     F V    ++  +  D+      +L  ++ E   ++ W IW  RNQ++ +  + NF+  +++ W +N+L +F+G        + +     +
Subjt:  WARKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGFLCRS---ARAQGEIAE

Query:  GQLGWQPPIYHFLTLNTDATIR
          + W PP      +N+DA +R
Subjt:  GQLGWQPPIYHFLTLNTDATIR

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.6e-2935.91Show/hide
Query:  MWYYEKRGRYTVRSGY---LLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECK
        +W YEK G Y+VRSGY   LL      +   S  E++RCWWN  W   IP+K+K F WRL  D LPT  NL +RGV++   C  C    E  +H  W CK
Subjt:  MWYYEKRGRYTVRSGY---LLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECK

Query:  WARKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLN-FK-QTNVWEWVTNYLTQFQGFLCRSARAQGEIAE-
        +A   W  S F          S   +L    E L + DFE+  ++ W +WN+RN   F+  T   FK    + EW   Y  +F+    +S    G +   
Subjt:  WARKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLN-FK-QTNVWEWVTNYLTQFQGFLCRSARAQGEIAE-

Query:  GQLGWQPPIYHFLTLNTDAT
         ++ WQPP      +NTDA+
Subjt:  GQLGWQPPIYHFLTLNTDAT

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.2e-2634.58Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWAR
        +W+Y+KRG Y+V+SGY LA   +     S  E    +W+  W   +P K+K F WR  +++LP+ +NL +R V  +  C RCKL  ET  HA+ ECK AR
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWAR

Query:  KTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGF-LCRSARAQGEIAEGQLGW
        K W  SPF+      N+      L    + L + D E  + LCW  W  RN+ +F    LN           + LT FQ     + +     I E Q  W
Subjt:  KTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGF-LCRSARAQGEIAEGQLGW

Query:  QPPIYHFLTLNTDA
         PP  +   +N DA
Subjt:  QPPIYHFLTLNTDA

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]2.2e-2631.65Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKL-KAETPLHAIWECKWA
        +W+Y K G Y+VRSGY +AA L+     SD E    WW   W  +IP KVKHF W++ H  +PT   L  R + ++  C RC   + ET  H +W C+  
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKL-KAETPLHAIWECKWA

Query:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQF-QGFLCRSARAQGEIAEGQLG
        R+ W ++ F  +         +  L R      +E+ E FL+L W +W  RN           + + + EW + YL++F Q    +  RA+ E A     
Subjt:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQF-QGFLCRSARAQGEIAEGQLG

Query:  WQPPIYHFLTLNTDATIR
        W PP      +N D  ++
Subjt:  WQPPIYHFLTLNTDATIR

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189541.7e-2935.91Show/hide
Query:  MWYYEKRGRYTVRSGY---LLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECK
        +W YEK G Y+VRSGY   LL      +   S  E++RCWWN  W   IP+K+K F WRL  D LPT  NL +RGV++   C  C    E  +H  W CK
Subjt:  MWYYEKRGRYTVRSGY---LLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECK

Query:  WARKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLN-FK-QTNVWEWVTNYLTQFQGFLCRSARAQGEIAE-
        +A   W  S F          S   +L    E L + DFE+  ++ W +WN+RN   F+  T   FK    + EW   Y  +F+    +S    G +   
Subjt:  WARKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLN-FK-QTNVWEWVTNYLTQFQGFLCRSARAQGEIAE-

Query:  GQLGWQPPIYHFLTLNTDAT
         ++ WQPP      +NTDA+
Subjt:  GQLGWQPPIYHFLTLNTDAT

A0A803NHG3 Uncharacterized protein2.5e-2833.03Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKA-ETPLHAIWECKWA
        MW+Y + G YTVRSGY +AA +R S    + + M+ WW   W  ++P KVKHF W+L +  LPT  NL  R V     C RC     E   HA+W C   
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKA-ETPLHAIWECKWA

Query:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQ-TNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLG
        +  W+ S F  E         +  L R    + ++ +E FL+LCW +W  RN    +K      Q   V EW   YL +++  +    R        Q  
Subjt:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQ-TNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLG

Query:  WQPPIYHFLTLNTDATIR
        W PP    + +N D  +R
Subjt:  WQPPIYHFLTLNTDATIR

A0A803P3X4 Uncharacterized protein7.3e-2833.18Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRC-KLKAETPLHAIWECKWA
        +W+Y K G Y+VRSGY +AA L+     SD E    WW   W  +IP KVKHF W+L H  LPT   L RR + ++  C RC     E   HAIW C+  
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRC-KLKAETPLHAIWECKWA

Query:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLGW
        R+ W+++ F  +     +   +  L R   +L +E+FE FL+L W +W  RN    +      +   + EW + +L++F+     + +   ++ E    W
Subjt:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLGW

Query:  QPPIYHFLTLNTDATIR
         PP      +N DA +R
Subjt:  QPPIYHFLTLNTDATIR

A0A803PEK8 Uncharacterized protein3.5e-3034.4Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCK-LKAETPLHAIWECKWA
        MW+Y K G YTV+SGY +A+ L      SD +    WW   W+ +IP K+KHF W+L ++ +PT  NL +RGV L   C RC     ET  HA+WECK +
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCK-LKAETPLHAIWECKWA

Query:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVF-SKCTLNFKQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLG
        ++ W  S    +         +  L R   L  +  FE FL++ W IWN RN  V   K  +     ++ +W   +LT+FQG     A     +      
Subjt:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVF-SKCTLNFKQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLG

Query:  WQPPIYHFLTLNTDATIR
        W  P    + LN DA ++
Subjt:  WQPPIYHFLTLNTDATIR

A0A803Q185 Uncharacterized protein3.9e-2933.18Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKL-KAETPLHAIWECKWA
        +W+Y K G Y+V+SGY +A  L+     SD      WW   W  +IP K+K F W+L H  LPT   L +R V    GC RC L  +ET  HA+WECK +
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKL-KAETPLHAIWECKWA

Query:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNF---KQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQ
        +  W+   F +E   H     +  L R   ++ ++ FE FL++ W +WN RN      CT +    +   + EW    L  FQG     +R Q  +   +
Subjt:  RKTWRTSPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNF---KQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQ

Query:  LGWQPPIYHFLTLNTDATIR
          W+ P +  + +N DA+++
Subjt:  LGWQPPIYHFLTLNTDATIR

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.3e-1023.71Show/hide
Query:  WYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARK
        W + + G+++VRS Y +      +     R  M  ++N  W  R+P +VK F W + +  + TE+   RR +     C  CK   E+ LH + +C     
Subjt:  WYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARK

Query:  TW-------RTSPF---NVEDWLH----NASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVF---SKCTLNFKQTNVWEWVTNYLTQFQGFLCR
         W       R   F   ++ +WL+    + S   D+ +             F ++ WW W  R   +F   +KC    K    W  V  Y       L  
Subjt:  TW-------RTSPF---NVEDWLH----NASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVF---SKCTLNFKQTNVWEWVTNYLTQFQGFLCR

Query:  SARAQGEIAEGQLGWQPPIYHFLTLNTDATIR
          + +    E  +GW  P   ++ +NTD   R
Subjt:  SARAQGEIAEGQLGWQPPIYHFLTLNTDATIR

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein1.0e-1030.08Show/hide
Query:  WNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARKTWRTSPFNVEDWLHNASSAVDVLFRGKEL---LVEEDFEK
        W   +  K+KHF WR     L T   LR R +D    C RC ++ ET  H ++ C + +  WR++   + +     SS  D L R  +L         ++
Subjt:  WNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARKTWRTSPFNVEDWLHNASSAVDVLFRGKEL---LVEEDFEK

Query:  FL--MLCWWIWNKRNQEVF-SKC
        FL   + W +W  RN  +F  KC
Subjt:  FL--MLCWWIWNKRNQEVF-SKC

AT3G09510.1 Ribonuclease H-like superfamily protein6.1e-1929.83Show/hide
Query:  MWYYEKRGRYTVRSGYLLAAGLRHSSG----------GSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPL
        +W Y   G YTVRSGY L   L H             GS   K R      WN  I  K+KHF WR     L T + L  RG+ +   CPRC  + E+  
Subjt:  MWYYEKRGRYTVRSGYLLAAGLRHSSG----------GSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPL

Query:  HAIWECKWARKTWRTSPFNV-------EDWLHNASSAVDVLFRGKELLVEEDFEKFL--MLCWWIWNKRNQEVFSKC------TLNFKQTNVWEWVTNYL
        HA++ C +A   WR S  ++        D+  N S+ ++ +    +     DF K L   L W IW  RN  VF+K       T+   +    +W+    
Subjt:  HAIWECKWARKTWRTSPFNV-------EDWLHNASSAVDVLFRGKELLVEEDFEKFL--MLCWWIWNKRNQEVFSKC------TLNFKQTNVWEWVTNYL

Query:  TQFQGFLCRSARAQGEIAEGQLGWQPPIYHFLTLNTDA
        TQ      ++     +IAE ++ W+ P   ++  N DA
Subjt:  TQFQGFLCRSARAQGEIAEGQLGWQPPIYHFLTLNTDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTATTATGAGAAAAGGGGTCGATACACAGTGAGAAGTGGGTATCTCTTAGCTGCTGGCTTGAGGCACAGTTCTGGAGGTTCTGATAGGGAGAAAATGCGG
TGTTGGTGGAATTTTTGTTGGAATAGAAGAATTCCGAGTAAGGTTAAGCACTTTGGGTGGAGGCTGTTCCATGATATGCTTCCAACTGAAGACAATTTAAGGAGA
AGGGGAGTGGACTTGCAGAGAGGATGCCCGAGGTGTAAGTTGAAAGCTGAAACGCCTTTACATGCCATTTGGGAGTGTAAGTGGGCAAGGAAAACTTGGAGGACC
TCTCCATTCAATGTTGAGGATTGGCTCCATAATGCTTCTAGTGCAGTTGATGTGCTGTTTCGAGGAAAGGAGTTGCTGGTAGAGGAGGATTTTGAGAAGTTTCTG
ATGCTATGCTGGTGGATCTGGAATAAACGGAATCAGGAGGTGTTTTCCAAGTGCACCCTAAATTTCAAGCAAACAAATGTGTGGGAGTGGGTAACGAATTATCTG
ACACAATTTCAAGGCTTTCTGTGTAGAAGTGCAAGGGCTCAAGGGGAAATTGCAGAGGGTCAGTTGGGTTGGCAACCGCCGATCTACCATTTTCTCACATTAAAC
ACAGATGCAACAATCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTATTATGAGAAAAGGGGTCGATACACAGTGAGAAGTGGGTATCTCTTAGCTGCTGGCTTGAGGCACAGTTCTGGAGGTTCTGATAGGGAGAAAATGCGG
TGTTGGTGGAATTTTTGTTGGAATAGAAGAATTCCGAGTAAGGTTAAGCACTTTGGGTGGAGGCTGTTCCATGATATGCTTCCAACTGAAGACAATTTAAGGAGA
AGGGGAGTGGACTTGCAGAGAGGATGCCCGAGGTGTAAGTTGAAAGCTGAAACGCCTTTACATGCCATTTGGGAGTGTAAGTGGGCAAGGAAAACTTGGAGGACC
TCTCCATTCAATGTTGAGGATTGGCTCCATAATGCTTCTAGTGCAGTTGATGTGCTGTTTCGAGGAAAGGAGTTGCTGGTAGAGGAGGATTTTGAGAAGTTTCTG
ATGCTATGCTGGTGGATCTGGAATAAACGGAATCAGGAGGTGTTTTCCAAGTGCACCCTAAATTTCAAGCAAACAAATGTGTGGGAGTGGGTAACGAATTATCTG
ACACAATTTCAAGGCTTTCTGTGTAGAAGTGCAAGGGCTCAAGGGGAAATTGCAGAGGGTCAGTTGGGTTGGCAACCGCCGATCTACCATTTTCTCACATTAAAC
ACAGATGCAACAATCAGATGA
Protein sequenceShow/hide protein sequence
MWYYEKRGRYTVRSGYLLAAGLRHSSGGSDREKMRCWWNFCWNRRIPSKVKHFGWRLFHDMLPTEDNLRRRGVDLQRGCPRCKLKAETPLHAIWECKWARKTWRT
SPFNVEDWLHNASSAVDVLFRGKELLVEEDFEKFLMLCWWIWNKRNQEVFSKCTLNFKQTNVWEWVTNYLTQFQGFLCRSARAQGEIAEGQLGWQPPIYHFLTLN
TDATIR