; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g019230 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g019230
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionheterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationChr04:50955103..50957034
RNA-Seq ExpressionLcy04g019230
SyntenyLcy04g019230
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134826.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus]1.8e-14498.48Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_008440908.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo]2.4e-14498.1Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_022133202.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia]2.4e-14497.72Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGS+QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDLT
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_023544122.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-14095.82Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDNDY+GSPPPRQKR +DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        E+RIHIASRPDGKATGEAYVEFAS E+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_038882740.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]4.1e-14498.1Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein8.9e-14598.48Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A1S4DTH1 heterogeneous nuclear ribonucleoprotein H2 isoform X11.2e-14498.1Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1BYF3 heterogeneous nuclear ribonucleoprotein H2 isoform X11.2e-14497.72Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGS+QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDLT
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1EFC5 heterogeneous nuclear ribonucleoprotein H2-like isoform X15.9e-14195.82Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEP PYFAVSSST GFQPYGYGSFPPT AFPVVRLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRF+DKDQMEYTEILKLRGLPFSV KS+IIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPST NEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X11.0e-14095.82Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGY+VGSKRQRMMEP PYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIY+NDY+GSPPPRQKR +DKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLT

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        E+RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F1.6e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F1.2e-2637.13Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  II+FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q60HC3 Heterogeneous nuclear ribonucleoprotein F1.6e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q794E4 Heterogeneous nuclear ribonucleoprotein F1.6e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F1.6e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      ND         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-6245.49Show/hide
Query:  GSGGVSDGYEVGSKRQRMME---PTPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG
        G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP P FP VRLRGLPF+C ++D+ +FF GLD+VDVL V++N +  GEAF V   
Subjt:  GSGGVSDGYEVGSKRQRMME---PTPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG

Query:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFND--KDQMEYTE
         +QV+FALQ++RQNMGRRYVEVFR  +Q+YY A+A EV    ++                               GS P R   + R +D  K+ +E+T 
Subjt:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFND--KDQMEYTE

Query:  ILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR
        IL+LRGLPFS  K +I++FF +F+L+ED +H+    +G+ TGEA+VEF +AE+++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Subjt:  ILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-0632.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-0632.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-9767.04Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYG RGAM GSG    GYEVGSKRQRMM+  PY AV +    F P+GY        FPVVRLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE
        VVFAG +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRF++K+++EYTE+LK+RGLP+SV K  IIEFF  
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE

Query:  FDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        + + + R+ +  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  FDLTEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-5565.84Show/hide
Query:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTED
        +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRF++K+++EYTE+LK+RGLP+SV K  IIEFF  + + + 
Subjt:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTED

Query:  RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        R+ +  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGACCGAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGACTCCCTACTTCGCAGTTAG
CAGCAGCACTGCTGGATTTCAACCTTATGGCTACGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTCAGAGGACTTCCCTTCAACTGCACCGACATTGACA
TTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGGCGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCCGTGCAGGTTGAG
TTTGCATTGCAACGTGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGACAGGATTATTATAATGCCGTTGCCGCTGAAGTAAATTACGAGGG
CATTTATGATAACGACTACCATGGAAGTCCTCCTCCTCGACAAAAGAGGTTCAACGACAAGGACCAGATGGAATACACTGAGATTCTGAAGCTGCGTGGTCTTCCCTTCT
CTGTGACAAAATCCAATATCATTGAATTTTTTGGAGAGTTCGACCTCACAGAAGATAGGATACATATTGCAAGTCGTCCAGATGGGAAGGCTACTGGTGAGGCTTATGTG
GAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATATGTGGAGTTGTTCCCTTCAACCCCAAATGAAGCTAGAAGAGC
TGAGTCAAGGTCAAGACAGTGA
mRNA sequenceShow/hide mRNA sequence
GGGATCGTATCGATTGTTTGTTTCAATTTGGGTGGTCGAATCGAATCGCAAAGCCAAATCGAAGTTCACAGTCCTCCGTAATCTTGGTTAGCTTTTGGAGGTTGTAGACA
ATCATGTACGGACCGAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGACTCCCTACTTCGCAGT
TAGCAGCAGCACTGCTGGATTTCAACCTTATGGCTACGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTCAGAGGACTTCCCTTCAACTGCACCGACATTG
ACATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGGCGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCCGTGCAGGTT
GAGTTTGCATTGCAACGTGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGACAGGATTATTATAATGCCGTTGCCGCTGAAGTAAATTACGA
GGGCATTTATGATAACGACTACCATGGAAGTCCTCCTCCTCGACAAAAGAGGTTCAACGACAAGGACCAGATGGAATACACTGAGATTCTGAAGCTGCGTGGTCTTCCCT
TCTCTGTGACAAAATCCAATATCATTGAATTTTTTGGAGAGTTCGACCTCACAGAAGATAGGATACATATTGCAAGTCGTCCAGATGGGAAGGCTACTGGTGAGGCTTAT
GTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATATGTGGAGTTGTTCCCTTCAACCCCAAATGAAGCTAGAAG
AGCTGAGTCAAGGTCAAGACAGTGA
Protein sequenceShow/hide protein sequence
MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPTPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVE
FALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFNDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLTEDRIHIASRPDGKATGEAYV
EFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ