; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g021260 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g021260
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationChr04:52569066..52576813
RNA-Seq ExpressionLcy04g021260
SyntenyLcy04g021260
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]6.6e-25197.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]1.0e-24896.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYID PV+AKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022925808.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita moschata]3.6e-24996.9Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LY NAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]4.3e-25097.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]6.6e-25197.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 25.1e-24996.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYID PV+AKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 28.4e-23691.92Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKETPRLTESGFQFLLMETNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF
              RDKE PRLTESGFQFLLMETNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWF
Subjt:  ------RDKETPRLTESGFQFLLMETNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF

Query:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 28.4e-24489.41Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKS+EEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISNSEER VDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFL
        LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITAEQIVTFL
Subjt:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKAD+HTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 21.7e-24996.9Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LY NAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 22.1e-25097.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 46.5e-6833.78Show/hide
Query:  KNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN
        Y + +Y+  ++ R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN

Query:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S+L   ++ LFS + Y+ PN++VA +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 42.9e-6833.55Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  ++ R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++VA +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Q680U9 General transcription and DNA repair factor IIH subunit TFB23.8e-20979.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

Q6CLR2 General transcription and DNA repair factor IIH subunit TFB24.8e-6330.39Show/hide
Query:  DMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQANLQK
        D +  LP     +LYE+   C AI R L P+AK F++ ML+ D  V+ + +++WV PD   + + +I  +  L + IE  + K+    RLNP F+ + + 
Subjt:  DMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQANLQK

Query:  LLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIRE
        +L  GE+       ++      S   L+ Y+ ++WE  L  ++ +     P      V+ + Q  GL+ + +    ++T  GFQFLL + NAQ+W ++ +
Subjt:  LLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIRE

Query:  YISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKD-SWFIPTKLATNL--------SMSLA-------------
        Y+  +E   +DP D+++F+  L     G+AY  D L+  QR  ++D+ D GL+   Q + D + F PT+LAT L        S S+A             
Subjt:  YISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKD-SWFIPTKLATNL--------SMSLA-------------

Query:  --------DSSSRKQ-GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPR-------------
                +++ R Q G +++ETNF++Y+YS+S L   IL LF  ++ +  N++   +T+ES+ NA  NGITAEQI+ +L+ +AHPR             
Subjt:  --------DSSSRKQ-GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPR-------------

Query:  -----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR
             V E +  +P  V DQIRLW+ +L+R+     + Y +F S + ++   DYA++   LLW++ K     V  + ++ + +  RR
Subjt:  -----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR

Q92759 General transcription factor IIH subunit 42.9e-6833.55Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  ++ R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++VA +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related2.7e-21079.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related2.7e-21079.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related2.7e-21079.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTGAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAAGCTCTATGAGAATGCATTCATCTGCGAAGCC
ATTCTCAGGTCACTTCCACCACTGGCCAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTAACAGCCAAGTCCATAGAGGAGTGGGTGCTTCCAGAT
GGAGTCTCAAAGTATAAGGTTGCCATTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACG
TTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCAATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAG
GCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCGTCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAG
AAAGGGCTTTTAAGTCAGAGGGATAAAGAAACTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAACGCACAACTTTGGTATATCATCAGA
GAATATATATCTAACTCTGAGGAGCGAGATGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTACGACATTGAT
ACATTGACAGAAGAACAGAGATATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCTACTAAATTA
GCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAAGGAAACAGGGATTTGTTGTGGTGGAGACGAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTA
CATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTTCCAAATCTTATAGTTGCAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAACGGA
ATTACAGCAGAGCAGATAGTTACTTTTCTACAGCAAAATGCACATCCTCGTGTTGCGGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTA
TGGGAATCAGATCTTAATAGGGTCGATATTACTCCTGCACATTTTTACGACGAATTCCCTTCTAGGGAAGTTTTCGAGGCTGCTTGCGACTACGCACGAGAATGG
AATGGGTTGCTATGGGAGGACTCGAAAAACATGCGGTTGGTCGTGAAGGCAGACATACACACACATATGCGGGAACATCTTCGCCGTCAAAAATAG
mRNA sequenceShow/hide mRNA sequence
GACCAAGCAGAAGGTCATCGCCAAATCATGAAGGTTGAGCTGCTGTTAATCAATTGATTGAATTCGAAGGATACCAGTCTGGAGTCTGGACCATTGGCTATAAAT
ACTCTTTGCAGTCTCACTGGCGAACTGGAAGCTGCAACCGTAGGTAATTTATCCAACACTTCTGGGATCCTCCTTTGCTTGCTCAAAGTTTTGCAGAACCCTAAA
GGACTAGCTGGAAAGAGAACTATAACGAAGGAAAAGAAGGAAAGCTCAATTCAGGATGCCTCAAGTGAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTC
CTTGCCCGCCATGAAGCTCGACAAGCTCTATGAGAATGCATTCATCTGCGAAGCCATTCTCAGGTCACTTCCACCACTGGCCAAGAAGTTTGTTTTACAAATGTT
ATACATTGATGCTCCAGTAACAGCCAAGTCCATAGAGGAGTGGGTGCTTCCAGATGGAGTCTCAAAGTATAAGGTTGCCATTGATCGATTGATTCAATTGAGAGT
ATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACGTTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAG
AGAACCAATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTC
AGGCCAAGCAGAGAAGCCGTCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGGCTTTTAAGTCAGAGGGATAAAGAAACTCCACGATTAACTGAGAG
TGGTTTCCAGTTCTTGTTGATGGAAACAAACGCACAACTTTGGTATATCATCAGAGAATATATATCTAACTCTGAGGAGCGAGATGTGGATCCTGCAGATTTGAT
TTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTACGACATTGATACATTGACAGAAGAACAGAGATATGCTATCAAGGACCTTGCTGATCTGGG
ACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAAGGAAACAGGG
ATTTGTTGTGGTGGAGACGAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTTCCAAA
TCTTATAGTTGCAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAACGGAATTACAGCAGAGCAGATAGTTACTTTTCTACAGCAAAATGCACATCCTCG
TGTTGCGGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTCGATATTACTCCTGCACATTTTTACGA
CGAATTCCCTTCTAGGGAAGTTTTCGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGAGGACTCGAAAAACATGCGGTTGGTCGTGAAGGC
AGACATACACACACATATGCGGGAACATCTTCGCCGTCAAAAATAGACCGTGAAGAAATGATACAATACTGCTGCTAGATCTTGTACATAACCATGGCCCCTGGT
ACATCAGTTTTTGTTGCTTTGGCATGGACAAAAGATTTAGTAAGTTAATGAAAATTGTGAAGAGCGCAGTGAGAGTTTTGTGGGAAAAAGAATGCTCTGTGCCAA
TGGCAATGAGTTTATTACTGTGTACGTTTATATTTTTCAAAGTTAGTTTCTCTTCTTCATAGTTCATACGACACGGAAGTTTTGTTAGATTGATTTCCCTTCGTT
GATCAACGTCTGGGCATAGGTTCATTCTACCATTTGTTTACCACCGGGACTTTATGTTTAAAAAATTTGGTAATCTATTCTATTCTATTTGGTTCAGCC
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPT
FQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIR
EYISNSEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKL
HCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREW
NGLLWEDSKNMRLVVKADIHTHMREHLRRQK