; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g021460 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g021460
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationChr04:52794182..52797356
RNA-Seq ExpressionLcy04g021460
SyntenyLcy04g021460
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-4973.43Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDND-------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE+++DD+D+D       D  ++RA SG R GSGGGR++V RCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDND-------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]1.3e-4875.52Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        MANS DQGWED++    +DDDDDNDN+     DN +RR   L+  R G GGGRSTVARCQADGCNADL+ A+ YHRRHKVCEFH++AAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFHA+SEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]3.3e-4976.92Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        MANS D  WED++   ++DDDDDND ++    +N+RR  SG   GR G GGGRSTVARCQADGCNADL+ AR YHRRHKVCEFHAKAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFHAVSEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]1.5e-4974.47Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDN-----DDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NSGDQGW D +EEEEE++++D+D+     +D  ++RA+S  R GSGGGR++VARCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDN-----DDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        CSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]2.3e-5077.86Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDND----NDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
        M NS DQ WED++ EE++D+DD+ +     D+  +R AL+GGR GSGGGR TVARCQADGCNADLS AR YHRRHKVCEFHAKAAVVILAGLEQRFCQQC
Subjt:  MANSGDQGWEDILEEEEEDDDDDND----NDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQC

Query:  SRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        SRFHAVSEFD+TKRSCR+RLAGHNERRRK LP+FHGQSST
Subjt:  SRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein6.2e-4975.52Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        MANS DQGWED++    +DDDDDNDN+     DN +RR   L+  R G GGGRSTVARCQADGCNADL+ A+ YHRRHKVCEFH++AAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFHA+SEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

A0A1S3AZN8 squamosa promoter-binding protein 11.6e-4976.92Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        MANS D  WED++   ++DDDDDND ++    +N+RR  SG   GR G GGGRSTVARCQADGCNADL+ AR YHRRHKVCEFHAKAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFHAVSEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

A0A6J1CK81 squamosa promoter-binding protein 14.3e-4275.36Show/hide
Query:  WEDILEEEEEDDDDDN--------DNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH
        W    EE+EE++++D           ++   RRALSGGR G G GRSTVARCQADGCNADLS AR YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH
Subjt:  WEDILEEEEEDDDDDN--------DNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH

Query:  AVSEFDETKRSCRKRLAGHNERRRKSL-PEFH-GQSST
        AVSEFDETKRSCR+RLAGHNERRRKSL  EFH GQSST
Subjt:  AVSEFDETKRSCRKRLAGHNERRRKSL-PEFH-GQSST

A0A6J1EFR3 Squamosa promoter-binding-like protein1.8e-4872.03Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDND-------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE++++++D+D       D  ++RA SG R GSGGGR++V RCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDND-------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein7.3e-5074.47Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDDNDN-----DDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NSGDQGW D +EEEEE++++D+D+     +D  ++RA+S  R GSGGGR++VARCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDDNDN-----DDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        CSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 101.5e-2866.32Show/hide
Query:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        R+  GG +  G GG      RCQA+GC ADLS A+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFDE KRSCRKRLA HN RRRK
Subjt:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

P93015 Squamosa promoter-binding-like protein 31.5e-2859.65Show/hide
Query:  LEEEEEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC
        L EEEE++++  D D   +  AL   + G     S V  CQ + C AD+S A+ YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFHA+SEFDE KRSC
Subjt:  LEEEEEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC

Query:  RKRLAGHNERRRKS
        R+RLAGHNERRRKS
Subjt:  RKRLAGHNERRRKS

Q0DAE8 Squamosa promoter-binding-like protein 101.5e-2866.32Show/hide
Query:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        R+  GG +  G GG      RCQA+GC ADLS A+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFDE KRSCRKRLA HN RRRK
Subjt:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

Q0E3F8 Squamosa promoter-binding-like protein 55.2e-2972.94Show/hide
Query:  RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSS
        RCQA+GC ADLS+A+ YHRRHKVC+FHAKAA V+ AG +QRFCQQCSRFH ++EFDE KRSCRKRL  HN RRRK  P   GQSS
Subjt:  RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSS

Q38741 Squamosa promoter-binding protein 12.3e-2958.12Show/hide
Query:  EEEDDDDDNDNDDNNQRRALS-GGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRK
        +E+ +++D+  +D+ + RAL+  G+  SG   ST   CQ + C A++++A+ YHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFDE KRSCR+
Subjt:  EEEDDDDDNDNDDNNQRRALS-GGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRK

Query:  RLAGHNERRRKSLPEFH
        RLAGHNERRRKS  + H
Subjt:  RLAGHNERRRKSLPEFH

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 81.8e-2964.36Show/hide
Query:  DDNNQRRALSGGRYGSGGGRSTVA--RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRR
        DD+   R     R G  G  ++++  RCQA+GCNADLS A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD  KRSCRKRLA HN RRR
Subjt:  DDNNQRRALSGGRYGSGGGRSTVA--RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRR

Query:  K
        K
Subjt:  K

AT1G27360.1 squamosa promoter-like 111.0e-2770.73Show/hide
Query:  GGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G    V RCQ DGC  DLSSA+ YHR+HKVCE H+K   V ++GLE+RFCQQCSRFHAVSEFDE KRSCRKRL+ HN RRRK
Subjt:  GGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

AT1G53160.1 squamosa promoter binding protein-like 45.9e-2859.29Show/hide
Query:  EEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRL
        EED + D D ++   R  + G R GS     ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFDE KRSCR+RL
Subjt:  EEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRL

Query:  AGHNERRRKSLPE
        AGHNERRRKS  E
Subjt:  AGHNERRRKSLPE

AT1G53160.2 squamosa promoter binding protein-like 45.9e-2859.29Show/hide
Query:  EEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRL
        EED + D D ++   R  + G R GS     ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFDE KRSCR+RL
Subjt:  EEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRL

Query:  AGHNERRRKSLPE
        AGHNERRRKS  E
Subjt:  AGHNERRRKSLPE

AT2G33810.1 squamosa promoter binding protein-like 31.1e-2959.65Show/hide
Query:  LEEEEEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC
        L EEEE++++  D D   +  AL   + G     S V  CQ + C AD+S A+ YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFHA+SEFDE KRSC
Subjt:  LEEEEEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC

Query:  RKRLAGHNERRRKS
        R+RLAGHNERRRKS
Subjt:  RKRLAGHNERRRKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCCGGAGATCAAGGTTGGGAGGACATACTGGAAGAAGAGGAAGAAGACGACGACGACGACAACGACAACGACGACAACAACCAAAGGAGGGCTTTAAGCGG
TGGTCGATATGGCAGCGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATTTGAGCAGCGCCAGGGCGTACCACCGCCGCCACAAGGTAT
GTGAGTTCCATGCCAAGGCGGCGGTGGTGATTTTGGCCGGATTGGAACAACGCTTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGATGAGACAAAACGA
AGCTGCCGGAAGCGCTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTACCGGAATTCCATGGACAATCCTCCACTTGA
mRNA sequenceShow/hide mRNA sequence
CTCGCTTGTCATTTCCATTATAGTTTATATATATAGTCATATGCTTCTTGTAAGTTGCTCCACATAGGCTTCTTTGCAAAATGGCAAACTCCGGAGATCAAGGTTGGGAG
GACATACTGGAAGAAGAGGAAGAAGACGACGACGACGACAACGACAACGACGACAACAACCAAAGGAGGGCTTTAAGCGGTGGTCGATATGGCAGCGGAGGAGGAAGGTC
AACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATTTGAGCAGCGCCAGGGCGTACCACCGCCGCCACAAGGTATGTGAGTTCCATGCCAAGGCGGCGGTGGTGA
TTTTGGCCGGATTGGAACAACGCTTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGATGAGACAAAACGAAGCTGCCGGAAGCGCTTGGCCGGACACAAT
GAACGGCGGCGAAAAAGCTTACCGGAATTCCATGGACAATCCTCCACTTGACAGTGACCCAAAAAAAAAAAACAACTAATTAATGATAAGAATAACAACAATAACAGTGA
TTAGTACTGATGAAGAGAAGAAGAAGAAGAAGAGGACGAAGAGTTCATGAAGATGAGAGGATCAGAAACCCACAGAGTCAGCGCCATGAAAATGAATTTGAAGTATTAAC
ATAATATGCTCTCTCTCTTCTGTCAAAACAAAACCCAATTAGTTGCGTCTTTTTCACTGGTTTTCTTCTGTTTCAGTTTCTATGGCTGTTTGTCTGTAAGCTTTCGCTGT
ATTGAAGCCCAAAGTTTTTATTATATATATTATTATATAGATGATGGTGCTTAAATTCTGTCACATCACTTAAATCTGTGTGTTCTTTTAAGCCTATCTTGTAAGAGAGC
CGGCCTATGTGGTTCATTTTATGTTTAAATACTACATAAAGTTGCTGTC
Protein sequenceShow/hide protein sequence
MANSGDQGWEDILEEEEEDDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKR
SCRKRLAGHNERRRKSLPEFHGQSST