; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g021990 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g021990
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description50S ribosomal protein L34
Genome locationChr04:53238238..53241926
RNA-Seq ExpressionLcy04g021990
SyntenyLcy04g021990
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000271 - Ribosomal protein L34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134668.1 50S ribosomal protein L34, chloroplastic [Cucumis sativus]3.5e-6391.61Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWVSTG +A RVPSASLV STGSR  CSVSLNT NN SARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSK+ VGQGKGR LVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_008439748.1 PREDICTED: 50S ribosomal protein L34, chloroplastic [Cucumis melo]2.2e-6594.84Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVS G +A RVPSASLVISTGSR SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSK+ VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_022142342.1 50S ribosomal protein L34, chloroplastic [Momordica charantia]8.7e-6290.97Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWV +G +A RVPSASLVISTGSRS CSVSLNTANNTSARSGLL CSFLPSSSLSCSSSFSG SLGLDW+S+I VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGKGA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_023003306.1 50S ribosomal protein L34, chloroplastic-like [Cucurbita maxima]4.9e-5788.31Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL
        MAAISV+SS  VST     RVPSASLV STGSR+ S+SLNTANN SAR GLLHCSFLPSSSLSCSSSFSGLSLGLDWS KI VGQGK RSLVVRAGKAAL
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

XP_038883793.1 50S ribosomal protein L34, chloroplastic [Benincasa hispida]9.3e-6494.19Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVSTG  A RVPSASLVISTG R  CSVSLNTANNTSARSGLLHCSFL SSSLSCSSSFSGLSLGLDWSSKI VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

TrEMBL top hitse value%identityAlignment
A0A0A0KI92 Uncharacterized protein1.7e-6391.61Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWVSTG +A RVPSASLV STGSR  CSVSLNT NN SARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSK+ VGQGKGR LVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A1S3AZG6 50S ribosomal protein L34, chloroplastic1.1e-6594.84Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVS G +A RVPSASLVISTGSR SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSK+ VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A5D3CSJ7 50S ribosomal protein L341.1e-6594.84Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLSSPWVS G +A RVPSASLVISTGSR SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSK+ VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSR-SCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A6J1CMH5 50S ribosomal protein L34, chloroplastic4.2e-6290.97Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA
        MAAISVLS+PWV +G +A RVPSASLVISTGSRS CSVSLNTANNTSARSGLL CSFLPSSSLSCSSSFSG SLGLDW+S+I VGQGKGRSLVVRAGKAA
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRS-CSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        LCQTKRNRSRKSLARTHGFRRRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGKGA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

A0A6J1KNU0 50S ribosomal protein L34, chloroplastic-like2.4e-5788.31Show/hide
Query:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL
        MAAISV+SS  VST     RVPSASLV STGSR+ S+SLNTANN SAR GLLHCSFLPSSSLSCSSSFSGLSLGLDWS KI VGQGK RSLVVRAGKAAL
Subjt:  MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

SwissProt top hitse value%identityAlignment
P82244 50S ribosomal protein L34, chloroplastic1.2e-3465.82Show/hide
Query:  MAAISVLSSPWVSTGGMAA---RVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFL-PSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAG
        MA +S+L     STG  AA   R PSASL   TGSR+ +  + + N  SARSG LHCSFL PSSSL  SS+FSGLSLGLD +S   V   + R  VVRAG
Subjt:  MAAISVLSSPWVSTGGMAA---RVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFL-PSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAG

Query:  KAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        KAALC TKR+RSRKSLARTHGFR RM TT+GRA+LKRRRAKGRK+LCTK+NPSSGK A
Subjt:  KAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

Q04CX6 50S ribosomal protein L348.6e-0470.59Show/hide
Query:  RKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ++ L R HGFR+RM T NGR VL RRRAKGRKVL
Subjt:  RKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q1I2H1 50S ribosomal protein L348.6e-0483.33Show/hide
Query:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ARTHGFR RM T NGRAVL RRRAKGRK L
Subjt:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q48BE9 50S ribosomal protein L348.6e-0483.33Show/hide
Query:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ARTHGFR RM T NGRAVL RRRAKGRK L
Subjt:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q9LP37 50S ribosomal protein L34, chloroplastic3.7e-3163.64Show/hide
Query:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL
        +A S L +P  S G +   VPSASL + TG R  S SL     +SA S LLHCSFL SS +S +S FSGLS+  D SS+     G + R LVVRAGKAAL
Subjt:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKR+RSRKSLARTHGFRRRMRTT+GRA +KRRRAKGR  LC KSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA

Arabidopsis top hitse value%identityAlignment
AT1G29070.1 Ribosomal protein L342.6e-3263.64Show/hide
Query:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL
        +A S L +P  S G +   VPSASL + TG R  S SL     +SA S LLHCSFL SS +S +S FSGLS+  D SS+     G + R LVVRAGKAAL
Subjt:  AAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQG-KGRSLVVRAGKAAL

Query:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA
        CQTKR+RSRKSLARTHGFRRRMRTT+GRA +KRRRAKGR  LC KSNPSSGK A
Subjt:  CQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGATATCAGTATTATCGTCCCCATGGGTTTCGACCGGAGGCATGGCCGCGCGCGTTCCTTCAGCTTCTCTTGTAATCTCCACTGGCTCTAGAAGTTGCTCCGT
ATCTCTTAATACCGCAAACAACACTTCCGCTCGTTCTGGACTGCTTCATTGTTCGTTTCTTCCTTCTTCCTCTCTTTCGTGTTCTTCATCTTTCTCAGGTTTATCTTTGG
GTTTGGATTGGAGCTCTAAAATTGAAGTTGGACAAGGGAAGGGCCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTTTGTCAGACTAAAAGAAACAGGTCGCGTAAA
TCCTTAGCTCGGACTCATGGTTTTCGCCGACGAATGCGAACCACCAATGGAAGAGCTGTTTTAAAGCGCAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAGTCCAA
CCCAAGCAGCGGAAAGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GGGAAACAGTCTAACAATGGCAGCGATATCAGTATTATCGTCCCCATGGGTTTCGACCGGAGGCATGGCCGCGCGCGTTCCTTCAGCTTCTCTTGTAATCTCCACTGGCT
CTAGAAGTTGCTCCGTATCTCTTAATACCGCAAACAACACTTCCGCTCGTTCTGGACTGCTTCATTGTTCGTTTCTTCCTTCTTCCTCTCTTTCGTGTTCTTCATCTTTC
TCAGGTTTATCTTTGGGTTTGGATTGGAGCTCTAAAATTGAAGTTGGACAAGGGAAGGGCCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTTTGTCAGACTAAAAG
AAACAGGTCGCGTAAATCCTTAGCTCGGACTCATGGTTTTCGCCGACGAATGCGAACCACCAATGGAAGAGCTGTTTTAAAGCGCAGACGTGCCAAGGGTAGGAAGGTCC
TCTGCACAAAGTCCAACCCAAGCAGCGGAAAGGGTGCTTAAGTTTTTCTCGCTTTAACCATTTCTAGGAAATGACACCCAAGAATTAAAATATTATCATAGAAGCATCTG
AAATGCTGGTTCTTTCGAGAAATCCGAACAATGTCTAATCTGGAAAGAGAACTCAAACCAATAATTGCATCTTATCACTGAAAATGTCACATCCCAATTGAAAAAGAGTT
AGATGGTGTAATTATCGCAACTTAAGCCTAATGTAAATTGTCAAACATCAATGTCACCTTTCCTTTTATGGATTTGAATTCTCTATCATCGACTTGCAAATTGCAGTGTA
ATATCTTTTTAAAGAAAAATTGATACTACTAGTAGGATAGGGTTTTCGAAACCACAGAAAAAAGCCCAAATAAGGAAACCATCCCCAAATTGCTGGTACAGAAAACCAAG
ACTAAGACCCATTTTCCAAATTTCAATCAGAAACGTCGTCACCTGGAACTTTACCAAAAGCACCCACAGAAAATGCATTTTGATTTGCATCATGCGCCTTCTCAGGAGAC
TGATTTTCTTCAACACCAATCGAATTTGGCTGGCCTTCTACATATTTCAACACTTCCTGTTTAAGAATGTGAAGTTGAATTACCAATTTTGAAGAACTTGGGTACTGGCC
AAAGAGTTGGGGAATTGTGGAATGCAAGCATCCATCGAGAGATTAGTAGTTTTACCTTCTCCAAGATATCACACATCTCCAAGCACCTGTCCTCCATTTTCTTGAAGACG
TTCATAAACCAGTCCAAGCCATTATTAGAGTTCTGTCCCATGTTCAGATGAAACCTGTCGTCCAACTTCAGAAGAAAAGAAAATTGAAGTGATTAAAAGGATCAATTACG
GAATGGAACAGAAAACTACGGCTGACACCAAAATAGAAGCCAACGCAATCTTTTGGATTCTGGAATACAAATTCTCTAGAAAAACAACAAATGGCAGTAGAACAACACGA
AGTAAGGAATAAAAGCCTTCCAAAACCAAGATGATCCACCACGTAGAAAATGAGAGCCAAAATTCAAATTAAAAACTCTCGAAACCCTTTCATCTTCATTGTAAACTGAT
GAGCTAATTCAGACGAAAGCAAATAGAGGGAGAAGGAGAAAGCCATGAACCTGATTGCAAAGAAGTTAAAAGAAAAACTGGAGCTAGATGTGAAATCCTGAAGTTGCTTG
AAAGCCCGATTCAACTAAACTTTAAAAAACGGACCACTCTCAGTTTCATATTCTTAAAAGGGAGAGAGAGAGAGAGCTTT
Protein sequenceShow/hide protein sequence
MAAISVLSSPWVSTGGMAARVPSASLVISTGSRSCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKIEVGQGKGRSLVVRAGKAALCQTKRNRSRK
SLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKGA