; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g024190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g024190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationChr04:55346367..55349984
RNA-Seq ExpressionLcy04g024190
SyntenyLcy04g024190
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]2.3e-7683.43Show/hide
Query:  MHLLSVISDF---SPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATL
        M LLSV SDF     SPH FP+ G RRT VCQ+R  VKIL+TLAPPLIA+L+ LSP+NKT GCL LA+T EIERGGALF+QACIGCHDGGGNIIQPGATL
Subjt:  MHLLSVISDF---SPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATL

Query:  FTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        F+SDLERNGADAEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  FTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]9.0e-8188.55Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M  LSV SDFS SPHCFP+K +RRTAVCQMRRQVKILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        DLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_023003546.1 cytochrome c6, chloroplastic [Cucurbita maxima]1.3e-7987.35Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M LLSVISDFS SPHCF +K +RRT VC+MRRQVK LK LAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHDGGGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        DLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]4.5e-8087.95Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M  LSV SDFS SPHCFP+K +RRTAVCQMRRQV ILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        DLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]5.3e-8187.35Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        MHLLS  S+F P+PHCFP+K +RRT VCQ+R QVKIL +LAPPLIAV +ALSP+N+T GCLALAQTAEIERGGALF+QACIGCHDGGGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        DLERNGADAEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
Subjt:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein1.0e-6985.81Show/hide
Query:  VKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITY
        + G+RRT VCQ+R QVKILK L PPLIA+L+ LSP+NKTSGCL LA+T EIERGGALF+Q+CIGCHDGGGNIIQPGATLF+SDLERNGADAEEEIY ITY
Subjt:  VKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITY

Query:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
         GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic1.1e-7683.43Show/hide
Query:  MHLLSVISDF---SPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATL
        M LLSV SDF     SPH FP+ G RRT VCQ+R  VKIL+TLAPPLIA+L+ LSP+NKT GCL LA+T EIERGGALF+QACIGCHDGGGNIIQPGATL
Subjt:  MHLLSVISDF---SPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATL

Query:  FTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        F+SDLERNGADAEEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  FTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic7.2e-7684.43Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMR-RQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFT
        MHLLS ISDFS + HCF +KGER TAVCQ R +Q+KI K+ APPLIAVLIALSP+ KT GC  LAQT EIERGGALFSQ+CIGCHDGGGNIIQPGATLF+
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMR-RQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFT

Query:  SDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        SDLERNGAD EEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVK+QADRGW NP
Subjt:  SDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic4.4e-8188.55Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M  LSV SDFS SPHCFP+K +RRTAVCQMRRQVKILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        DLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic6.3e-8087.35Show/hide
Query:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS
        M LLSVISDFS SPHCF +K +RRT VC+MRRQVK LK LAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHDGGGNIIQPGATLF+S
Subjt:  MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTS

Query:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        DLERNGAD+EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  DLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c62.3e-1036.08Show/hide
Query:  AEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGW
        A+IE G  +F+  C  CH GG N+I P  TL    LE NG +A   I +    GK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  AEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGW

P07497 Cytochrome c67.8e-1131.78Show/hide
Query:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  ++P          AQ A++  GG +FS  C  CH GG N++ P  TL  +DL++ G  + E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW

P0A3X9 Cytochrome c65.1e-1032.77Show/hide
Query:  IAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQ
        IA+L++L+P          A  A++  G  +FS  C  CH GGGN++    TL    LE+ G  +E+ I +   +GK  MP             F  RL 
Subjt:  IAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQ

Query:  EEEIRLLAKFVKVQADRGW
        +E+I+ +A +V  QA +GW
Subjt:  EEEIRLLAKFVKVQADRGW

P25935 Cytochrome c67.8e-1131.78Show/hide
Query:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  ++P          AQ A++  GG +FS  C  CH GG N++ P  TL  +DL++ G  + E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW

Q93VA3 Cytochrome c6, chloroplastic2.9e-5071.21Show/hide
Query:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK
        +LK LAPPL AVL+A+SP+     C    +L QT +I+RG  LF++ACIGCHD GGNIIQPGATLFT DLERNG D EEEIY +TY+GKGRMPGFGE C 
Subjt:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK

Query:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP
        PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c2.1e-5171.21Show/hide
Query:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK
        +LK LAPPL AVL+A+SP+     C    +L QT +I+RG  LF++ACIGCHD GGNIIQPGATLFT DLERNG D EEEIY +TY+GKGRMPGFGE C 
Subjt:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK

Query:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP
        PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTCTCTCCGTAATTTCAGATTTTAGCCCTAGTCCCCATTGCTTTCCAGTAAAGGGAGAGCGACGAACAGCAGTTTGTCAAATGCGTAGACAAGTTAAGATTCT
CAAGACCTTGGCCCCCCCTCTGATTGCTGTGCTTATAGCATTATCTCCTGTCAACAAAACCTCAGGATGTCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTG
CATTGTTTAGTCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCGACACTCTTTACAAGTGATCTTGAAAGAAATGGAGCTGATGCCGAA
GAGGAGATCTACCATATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGA
GATTAGGCTTTTGGCGAAGTTTGTAAAGGTGCAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
TAACTCTTATTTCTAAGAGTTATCACACCCCCAAACTTAGCTCATTGCTCGCCCCCGAGCAATGCTAGGCCAAAAGCTTTGGACAGCGACAGCGTAGTTTCAGTTTGGGT
GAAGGCGAGGCGGTAGCTAGCTGCTAGCCACATCCAAAACCCGCCAAAGCGCAGGATCAACGACGAGAGCGCCCGCGTCAGAGACGAAAGAGATGCATCTTCTCTCCGTA
ATTTCAGATTTTAGCCCTAGTCCCCATTGCTTTCCAGTAAAGGGAGAGCGACGAACAGCAGTTTGTCAAATGCGTAGACAAGTTAAGATTCTCAAGACCTTGGCCCCCCC
TCTGATTGCTGTGCTTATAGCATTATCTCCTGTCAACAAAACCTCAGGATGTCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTGCATTGTTTAGTCAAGCTT
GCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCGACACTCTTTACAAGTGATCTTGAAAGAAATGGAGCTGATGCCGAAGAGGAGATCTACCATATT
ACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAGATTAGGCTTTTGGCGAA
GTTTGTAAAGGTGCAGGCAGATCGGGGGTGGCCAAACCCATAGATGGTAATTGATTTTTGCGCCAGAATATTATGCCTTGGTTACCCATTACTAATTTATGTTTACTTTT
GTAAAAAATTGAAGTCTTACCTGTCAATATTTCCCAAATTCGTATCTGAATCAATGGCCTTACATTTGATATATGTGCTACATGGACTGTTGCTTTGTCCCGTTGATAAA
TATGGCAATATGTGTTTCTAAAGTGCGATGCCCATACTTGGCTATCGCACATGAAATGATCATCAAACGAACGTCAAACTAACGACTCAAACTCAAATGTTCCAATTTCA
AAACTTTGAAAGACGGGAATATATATGTGCCAATTTGAACAAGAAAAAGTATATTGATGCACCTTTGCATTGTTCTTATTCAATATTCGCCTTTGAGGATTTGAAGATAA
TTGAAAGAACATTGTAGGAACATTTATCGAAAGCTTTCCTCATTTGTTGTGTCCAATTGAATTCATAAACACGTTGCAGAACATTAAAGAACAGGAACACAAACCAGACT
AACCAAAGATAAACCAATAAGTTTGATCAGAAGCTGAAGTGATCAAATGTAAGTGTATTTTAGTAGAAAATTGAG
Protein sequenceShow/hide protein sequence
MHLLSVISDFSPSPHCFPVKGERRTAVCQMRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAE
EEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP