; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy04g024210 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy04g024210
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCytochrome c6
Genome locationChr04:55362324..55365942
RNA-Seq ExpressionLcy04g024210
SyntenyLcy04g024210
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004506 - squalene monooxygenase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026384.1 Cytochrome c6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-6791.24Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        MRRQVKILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+SDLERNGAD+EEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]6.1e-6791.24Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        MRRQVKILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+SDLERNGAD+EEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_023003546.1 cytochrome c6, chloroplastic [Cucurbita maxima]1.4e-6690.51Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        MRRQVK LK LAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHDGGGNIIQPGATLF+SDLERNGAD+EEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]3.0e-6690.51Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        MRRQV ILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+SDLERNGAD+EEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]4.7e-6791.24Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        +R QVKIL +LAPPLIAV +ALSP+N+T GCLALAQTAEIERGGALF+QACIGCHDGGGNIIQPGATLF+SDLERNGADAEEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein6.2e-6587.59Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        +R QVKILK L PPLIA+L+ LSP+NKTSGCL LA+T EIERGGALF+Q+CIGCHDGGGNIIQPGATLF+SDLERNGADAEEEIY ITY GKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic5.6e-6688.32Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        +R  VKIL+TLAPPLIA+L+ LSP+NKT GCL LA+T EIERGGALF+QACIGCHDGGGNIIQPGATLF+SDLERNGADAEEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic9.9e-6387.41Show/hide
Query:  RQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENC
        +Q+KI K+ APPLIAVLIALSP+ KT GC  LAQT EIERGGALFSQ+CIGCHDGGGNIIQPGATLF+SDLERNGAD EEEIYHITYYGKGRMPGFGENC
Subjt:  RQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENC

Query:  KPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        KPRGQCTFGPRLQE+EIRLLAKFVK+QADRGW NP
Subjt:  KPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic3.0e-6791.24Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        MRRQVKILKTLAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHD GGNIIQPGATLF+SDLERNGAD+EEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic6.6e-6790.51Show/hide
Query:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE
        MRRQVK LK LAPPLIAVLIAL P+NKT GC ALAQ+AEIERGGALFS ACIGCHDGGGNIIQPGATLF+SDLERNGAD+EEEIY ITYYGKGRMPGFGE
Subjt:  MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGE

Query:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP
        NCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  NCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c61.9e-1036.08Show/hide
Query:  AEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGW
        A+IE G  +F+  C  CH GG N+I P  TL    LE NG +A   I +    GK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  AEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKVQADRGW

P07497 Cytochrome c68.4e-1131.78Show/hide
Query:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  ++P          AQ A++  GG +FS  C  CH GG N++ P  TL  +DL++ G  + E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW

P0A3X9 Cytochrome c64.2e-1032.77Show/hide
Query:  IAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQ
        IA+L++L+P          A  A++  G  +FS  C  CH GGGN++    TL    LE+ G  +E+ I +   +GK  MP             F  RL 
Subjt:  IAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTFGPRLQ

Query:  EEEIRLLAKFVKVQADRGW
        +E+I+ +A +V  QA +GW
Subjt:  EEEIRLLAKFVKVQADRGW

P25935 Cytochrome c68.4e-1131.78Show/hide
Query:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  ++P          AQ A++  GG +FS  C  CH GG N++ P  TL  +DL++ G  + E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKVQADRGW

Q93VA3 Cytochrome c6, chloroplastic2.4e-5071.21Show/hide
Query:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK
        +LK LAPPL AVL+A+SP+     C    +L QT +I+RG  LF++ACIGCHD GGNIIQPGATLFT DLERNG D EEEIY +TY+GKGRMPGFGE C 
Subjt:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK

Query:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP
        PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c1.7e-5171.21Show/hide
Query:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK
        +LK LAPPL AVL+A+SP+     C    +L QT +I+RG  LF++ACIGCHD GGNIIQPGATLFT DLERNG D EEEIY +TY+GKGRMPGFGE C 
Subjt:  ILKTLAPPLIAVLIALSPVNKTSGCL---ALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCK

Query:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP
        PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  PRGQCTFGPRLQEEEIRLLAKFVKVQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTAGACAAGTTAAGATTCTCAAGACCTTGGCCCCCCCTCTGATTGCTGTGCTTATAGCATTATCTCCTGTCAACAAAACCTCAGGATGTCTTGCGCTTGCCCAAAC
GGCAGAAATAGAAAGAGGAGGTGCATTGTTTAGTCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCGACACTCTTTACAAGTGATCTTG
AAAGAAATGGAGCTGATGCCGAAGAGGAGATCTACCATATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGCAAGCCAAGGGGTCAGTGCACATTT
GGTCCCCGTTTGCAGGAGGAAGAGATTAGGCTTTTGGCGAAGTTTGTAAAGGTGCAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
AAATAAAAAAAATAAAAAAATAAAGTAAAAGGATTGGATAATTGAACCGGAGCACCGATTGTCCGACCCGCTTTTCACTTTGGACAGCGACAGCGTAGTTTCAGTTTGGG
TGAAGGCGAGGCGGTAGCTAGCTGCTAGCCACATCCAAAACCCGCCAAAGCGCAGGATCAACGACGAGAGCGCCCGCGTCAGAGACGAAAGAGATGCATCTTCTCTCCGT
AATTTCAGATTTTAGCCCTAGTCCCCATTGCTTTCCAGTAAAGGTCTCTCCCTCTTCTCTCACTTTTCTTTGTATGTATCTCTCGCTGAACATTGAAAGTTTCAAAGTTG
TAAGCCAACCAGGGAGAGCGACGAACAGCAGTTTGTCAAATGCGTAGACAAGTTAAGATTCTCAAGACCTTGGCCCCCCCTCTGATTGCTGTGCTTATAGCATTATCTCC
TGTCAACAAAACCTCAGGATGTCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTGCATTGTTTAGTCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACA
TAATTCAGCCCGGTGCGACACTCTTTACAAGTGATCTTGAAAGAAATGGAGCTGATGCCGAAGAGGAGATCTACCATATTACATATTATGGGAAAGGAAGAATGCCTGGT
TTTGGTGAGAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAGATTAGGCTTTTGGCGAAGTTTGTAAAGGTGCAGGCAGATCGGGGGTG
GCCAAACCCATAGATGGTAATTGATTTTTGCGCCAGAATATTATGCCTTGGTTACCCATTACTAATTTATGTTTACTTTTGTAAAAAATTGAAGTCTTACCTGTCAATAT
TTCCCAAATTCGTATCTGAATCAATGGCCTTACATTTGATATATGTGCTACATGGACTGTTGCTTTGTCCCGTTGATAAATATGGCAATATGTGTTTCTAAAGTGCGATG
CCCATACTTGGCTATCGCACATGAAATGATCATCAAACGAACGTCAAACTAACGACTCAAACTCAAATGTTCCAATTTCAAAACTTTGAAAGACGGGAATATATATGTGC
CAATTTGAACAAGAAAAAGTATATTGATGCACCTTTGCATTGTTCTTATTCAATATTCGCCTTTGAGGATTTGAAGATAATTGAAAGAACATTGTAGGAACATTTATCGA
AAGCTTTCCTCATTTGTTGTGTCCAATTGAATTCATAAACACGTTGCAGAACATTAAAGAACAGGAACACAAACCAGACTAACCAAAGATAAACCAATAAGTTTGATCAG
AAGCTGAAGTGATCAAATGTAAGTGTATTTTAGTAGAAAATTGAG
Protein sequenceShow/hide protein sequence
MRRQVKILKTLAPPLIAVLIALSPVNKTSGCLALAQTAEIERGGALFSQACIGCHDGGGNIIQPGATLFTSDLERNGADAEEEIYHITYYGKGRMPGFGENCKPRGQCTF
GPRLQEEEIRLLAKFVKVQADRGWPNP