; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g000530 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g000530
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description40s ribosomal protein SA
Genome locationChr05:614794..617062
RNA-Seq ExpressionLcy05g000530
SyntenyLcy05g000530
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2408876.1 40S ribosomal protein [Vigna angularis]4.2e-0554.17Show/hide
Query:  SVPSLSLY--FKTMRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST
        ++P+++ Y     MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ST
Subjt:  SVPSLSLY--FKTMRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST

OVA01990.1 Ribosomal protein S2 [Macleaya cordata]9.3e-0559.09Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWNA
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T     KW+A
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWNA

PIA27553.1 hypothetical protein AQUCO_07600014v1 [Aquilegia coerulea]9.3e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T    RKW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

XP_039034013.1 40S ribosomal protein SA-like [Hibiscus syriacus]9.3e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ST    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

XP_039064988.1 40S ribosomal protein SA-like [Hibiscus syriacus]9.3e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ST    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

TrEMBL top hitse value%identityAlignment
A0A1D1XDW5 40S ribosomal protein SA (Fragment)4.5e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T    RKW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

A0A200PUT7 40S ribosomal protein SA4.5e-0559.09Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWNA
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T     KW+A
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWNA

A0A2G5C8D4 40S ribosomal protein SA4.5e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T    RKW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

A0A6A2YDY7 40S ribosomal protein SA4.5e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ST    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

A0A6A3BY60 40S ribosomal protein SA4.5e-0560.47Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ST    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA6.1e-0758.14Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T     KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

O22518 40S ribosomal protein SA7.9e-0765.71Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST
        MRYVDIG+ ANNKGKH   CL WL+ +MVLQ++ T
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST

O65751 40S ribosomal protein SA3.0e-0662.86Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST
        M YVDIG+ ANNKGKH   CL WL+ +MVLQ++ T
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST

Q08682 40S ribosomal protein Sa-11.0e-0655.81Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MR+VDIG+ ANNKGKH   CL WL+ +MVLQ++ T    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

Q9ZSR8 40S ribosomal protein SA1.0e-0655.81Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MR+VDIG+ ANNKGKH   CL WL+ +MVLQ++ T    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA7.3e-0855.81Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MR+VDIG+ ANNKGKH   CL WL+ +MVLQ++ T    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

AT1G72370.2 40s ribosomal protein SA7.3e-0855.81Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        MR+VDIG+ ANNKGKH   CL WL+ +MVLQ++ T    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

AT3G04770.1 40s ribosomal protein SA B4.8e-0753.49Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        M +VDIG+ ANNKGKH   CL WL+ +MVLQ++ T    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN

AT3G04770.2 40s ribosomal protein SA B4.8e-0753.49Show/hide
Query:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN
        M +VDIG+ ANNKGKH   CL WL+ +MVLQ++ T    +KW+
Subjt:  MRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQST----RKWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTGTGTCCGATCACCGAGATGCCAAGAACTGAGGCTTTGAAATGGAACGCTATGTTTCCAAAGTACAGAGTAATGACGCTAGAATGGAGGAGGCTACTCTCTGT
ACCTTCCCTATCATTGTATTTTAAGACCATGCGATATGTTGACATTGGAGTTAATGCTAATAACAAAGGGAAGCATAGAACAATATGCCTCTTGTGGCTGATGAGAAAGA
TGGTTCTACAAGTGCAGAGCACCCGCAAGTGGAATGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCTGTGTCCGATCACCGAGATGCCAAGAACTGAGGCTTTGAAATGGAACGCTATGTTTCCAAAGTACAGAGTAATGACGCTAGAATGGAGGAGGCTACTCTCTGT
ACCTTCCCTATCATTGTATTTTAAGACCATGCGATATGTTGACATTGGAGTTAATGCTAATAACAAAGGGAAGCATAGAACAATATGCCTCTTGTGGCTGATGAGAAAGA
TGGTTCTACAAGTGCAGAGCACCCGCAAGTGGAATGCGTAG
Protein sequenceShow/hide protein sequence
MMLCPITEMPRTEALKWNAMFPKYRVMTLEWRRLLSVPSLSLYFKTMRYVDIGVNANNKGKHRTICLLWLMRKMVLQVQSTRKWNA