CuGenDBv2

Gene ID	Lcy05g000670
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	homeobox protein prospero-like isoform X1
Genome location	Chr05:704778..708349
RNA-Seq Expression	Lcy05g000670
Synteny	Lcy05g000670
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0007623 - circadian rhythm (biological process) GO:0032259 - methylation (biological process) GO:0048510 - regulation of timing of transition from vegetative to reproductive phase (biological process) GO:0048574 - long-day photoperiodism, flowering (biological process) GO:0000124 - SAGA complex (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0016604 - nuclear body (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003712 - transcription coregulator activity (molecular function) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR021950 - Transcription factor Spt20

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593564.1 Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING, partial [Cucurbita argyrosperma subsp. sororia]

5.4e-102

88.04

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGKRF  KPC TQSG TAL DDDSKDG R L +NES++ARK +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        IEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

KAG7025907.1 hypothetical protein SDJN02_12405 [Cucurbita argyrosperma subsp. argyrosperma]

5.4e-102

88.04

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGKRF  KPC TQSG TAL DDDSKDG R L +NES++ARK +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        IEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

XP_022964273.1 uncharacterized protein LOC111464340 isoform X1 [Cucurbita moschata]

1.0e-100

87.62

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKF-EGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPS
        MGVSFKIS KGKRF  KPC TQSG TAL DDDSKDG R L +NES++ARK  +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPS
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKF-EGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPS

Query:  EIEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLIS
        EIEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLIS
Subjt:  EIEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLIS

Query:  DNSWTYGDLM
        DNSWTYGDLM
Subjt:  DNSWTYGDLM

XP_022964274.1 uncharacterized protein LOC111464340 isoform X2 [Cucurbita moschata]

5.4e-102

88.04

Show/hide

Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGKRF  KPC TQSG TAL DDDSKDG R L +NES++ARK +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        IEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

XP_023513769.1 uncharacterized protein LOC111778279 [Cucurbita pepo subsp. pepo]

1.3e-100

87.08

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGKRF  KPC T+SG TAL +DDSKDG R L +NES++ARK +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        IEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

TrEMBL top hits

e value

%identity

Alignment

A0A5D3C0H1 Histone-lysine N-methyltransferase 2D isoform X1

1.1e-97

86.6

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGKRFH KP + Q+GST LDDD+SKDGSRV+ KNES++ARK EGEETER G+VNGV G   SSLGRL PENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        IEPTHP+TLQDNSK LLPYDRKSENLFSAIECG+LPGDILDDIPCKY DGTIVCEVRDFRG  PEQGPGAQSTDGLP V+KIHLRMSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

A0A6J1HKB7 uncharacterized protein LOC111464340 isoform X1

4.9e-101

87.62

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKF-EGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPS
        MGVSFKIS KGKRF  KPC TQSG TAL DDDSKDG R L +NES++ARK  +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPS
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKF-EGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPS

Query:  EIEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLIS
        EIEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLIS
Subjt:  EIEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLIS

Query:  DNSWTYGDLM
        DNSWTYGDLM
Subjt:  DNSWTYGDLM

A0A6J1HMP2 uncharacterized protein LOC111464340 isoform X2

2.6e-102

88.04

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Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGKRF  KPC TQSG TAL DDDSKDG R L +NES++ARK +G ETER GDV G+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        IEPTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

A0A6J1KC07 homeobox protein prospero-like isoform X1

7.9e-99

86.19

Show/hide

Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGE-ETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPS
        MGVSFKIS KGK F  K C TQSG TAL DDDSKDG R L +NES++ARK + + ETER GDVNG+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPS
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGE-ETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPS

Query:  EIEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLIS
        EI+PTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLIS
Subjt:  EIEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLIS

Query:  DNSWTYGDLM
        DNSWTYGDLM
Subjt:  DNSWTYGDLM

A0A6J1KKZ5 homeobox protein prospero-like isoform X2

7.1e-100

86.6

Show/hide

Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS KGK F  K C TQSG TAL DDDSKDG R L +NES++ARK +  ETER GDVNG+IGLSESSLGR TPENGVSFTLNLFQDGYSIGKPSE
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
        I+PTHP+TLQDNSKLLLPYDRKSENLFSAIECG+LPGDILDDIPCKYVDGTIVCEVRDFRGG PEQGPGAQSTDGLP V+KIHL+MSLENVVKDIPLISD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

SwissProt top hits

e value

%identity

Alignment

F4IDB2 Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING

1.6e-40

47.37

Show/hide

Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS  G++F  K       ST L   DS       PK    ++ K +  +    GDV+   G S+ SL  ++P++ VSF L+L+ +GYSIGK S 
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
         E     + +D  K+L PYDR +E L SAIE G+LPGDIL+DIPCK+VDG ++CEV D+R  +        S+   P ++K+ L+MSLENVVKDIP +SD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

Arabidopsis top hits

e value

%identity

Alignment

AT1G72390.1 CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink).

1.1e-41

47.37

Show/hide

Query:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE
        MGVSFKIS  G++F  K       ST L   DS       PK    ++ K +  +    GDV+   G S+ SL  ++P++ VSF L+L+ +GYSIGK S 
Subjt:  MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSE

Query:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD
         E     + +D  K+L PYDR +E L SAIE G+LPGDIL+DIPCK+VDG ++CEV D+R  +        S+   P ++K+ L+MSLENVVKDIP +SD
Subjt:  IEPTHPNTLQDNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISD

Query:  NSWTYGDLM
        NSWTYGDLM
Subjt:  NSWTYGDLM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGTCTCCTTCAAAATCTCGAACAAGGGTAAAAGGTTTCATTTGAAGCCTTGTGTTACGCAATCTGGGAGCACTGCCCTTGATGACGACGACTCTAAGGATGGGTC
GAGGGTTCTACCGAAGAACGAATCTGCTATTGCTCGAAAATTTGAGGGTGAAGAAACTGAAAGACGTGGGGATGTAAATGGGGTGATTGGGTTATCTGAGTCTTCTTTAG
GTCGTTTAACTCCAGAGAATGGAGTTTCCTTCACATTAAACCTCTTTCAAGATGGATATTCTATCGGAAAACCATCAGAGATTGAGCCTACACACCCAAATACTCTACAA
GATAATTCAAAGTTGTTACTTCCTTATGACAGGAAATCTGAAAACTTGTTTTCTGCTATTGAATGTGGCCAATTGCCTGGAGATATTCTTGATGATATACCTTGCAAATA
TGTCGATGGCACAATTGTTTGTGAGGTGCGGGATTTTCGTGGAGGTTCTCCTGAACAGGGGCCTGGTGCTCAATCGACTGATGGGCTTCCTACTGTCAGTAAGATACATC
TTAGGATGTCCTTGGAAAATGTGGTAAAAGATATTCCATTAATTTCAGATAATTCATGGACCTACGGTGATCTGATGGTATGTATGATCAGTTCATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGVSFKISNKGKRFHLKPCVTQSGSTALDDDDSKDGSRVLPKNESAIARKFEGEETERRGDVNGVIGLSESSLGRLTPENGVSFTLNLFQDGYSIGKPSEIEPTHPNTLQ
DNSKLLLPYDRKSENLFSAIECGQLPGDILDDIPCKYVDGTIVCEVRDFRGGSPEQGPGAQSTDGLPTVSKIHLRMSLENVVKDIPLISDNSWTYGDLMVCMISS

Lcy05g000670 (gene) of Sponge gourd (P93075) v1 genome