; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g001920 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g001920
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionNuclear pore complex protein NUP35
Genome locationChr05:1817776..1821061
RNA-Seq ExpressionLcy05g001920
SyntenyLcy05g001920
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0031965 - nuclear membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0044615 - nuclear pore nuclear basket (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007846 - RNA-recognition motif (RRM) Nup35-type domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 - Nucleoporin, NUP53
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]2.4e-17090.3Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P KNKS+ASTSYTPI+GQ  RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLP PREVARPEV+RNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRG  RPY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]4.9e-17190.91Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P KNKS+ASTSYTPISGQQ RQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLP PREVARPEVQRNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ L+E+LNNPGFMVIPPVSSRTSELLATRG  RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        G ++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]1.6e-16990Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P KNKS+ASTSYTPI+GQ  RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLP PREVARPEV+RNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRG   PY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]4.7e-17492.12Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        PMKNKS+ASTSYTP SGQQ RQGSAGF+WWSTSKG  +EQEDKGKSSPVEG +QPGALI LP PREVARPEVQRNC PAGKLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG+QINGVLIVGVKPVDPMHRQ LDEK+NNPGFMVIPPV SRT+ELLATRG  R YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNSNARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]4.1e-17894.24Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+ VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGI DYP+SPEIKSDPRTPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P+KNKS+ASTSYTPISGQQ RQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLP PREVARPEVQRNCLPA KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLN+PGFMV PPVSSRTSELLATRGL RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNS+ARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

TrEMBL top hitse value%identityAlignment
A0A0A0K7B2 Nuclear pore complex protein NUP352.4e-17190.91Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P KNKS+ASTSYTPISGQQ RQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLP PREVARPEVQRNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ L+E+LNNPGFMVIPPVSSRTSELLATRG  RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        G ++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP357.7e-17090Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P KNKS+ASTSYTPI+GQ  RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLP PREVARPEV+RNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRG   PY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP351.2e-17090.3Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        P KNKS+ASTSYTPI+GQ  RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLP PREVARPEV+RNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRG  RPY+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP352.3e-17492.12Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        PMKNKS+ASTSYTP SGQQ RQGSAGF+WWSTSKG  +EQEDKGKSSPVEG +QPGALI LP PREVARPEVQRNC PAGKLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG+QINGVLIVGVKPVDPMHRQ LDEK+NNPGFMVIPPV SRT+ELLATRG  R YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNSNARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1JYW9 Nuclear pore complex protein NUP351.0e-16688.82Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MN+TVHRT NSGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYP+SPE+KSDP TPIQSHDFSS
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
        PMK+KS+ASTS+TPIS QQ RQ SAGF+WWST KG  +EQEDKGKSSPVEGVIQPGALITL  PREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+KNGIQING+LIVGVKPVDP+ RQTLDEKLNNPGFMV+PPVSSRT+EL    G  RPYN QN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN

Query:  GNSNARQSGG-TIASPSKSLVSKVMDLMFGV
        GNS ARQSGG TIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGG-TIASPSKSLVSKVMDLMFGV

SwissProt top hitse value%identityAlignment
O04326 Nuclear pore complex protein NUP352.5e-12568.86Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDF
        M++  HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI DY  SP+ KSD RTP QS   + 
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDF

Query:  SSPMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPAD
         +P K K  AS S++ ++ QQ +Q S   +WWS SK G STEQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P G L+EEEWVTVYGFSP D
Subjt:  SSPMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPAD

Query:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN
        TNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVKPVDP+ +Q L+E+LNN GFM +PP SS  +     R L+RP  
Subjt:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN

Query:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV
        LQNG++ + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV

Q66IJ0 Nucleoporin NUP353.8e-1727.38Show/hide
Query:  MNSTVHRTPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS
        + S     P++G Q L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +D+SG+   P   I D   SP + S P  P ++
Subjt:  MNSTVHRTPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS

Query:  HDFS---SPMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYG
          FS   +P+     +S     ISG + R  S+ F+    + G S +                    T   P ++     Q + L +    ++ WVTV+G
Subjt:  HDFS---SPMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYG

Query:  FSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNP--GFMVIPPV--------SSR
        F  A  + +L +F + G I+KHV    + NWMHI YQ++  A KAL+K+G      +++GVKP          EK++ P    +  PPV        S  
Subjt:  FSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNP--GFMVIPPV--------SSR

Query:  TSELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG
        T    + R LA  Y           +        +S+VSK M+ MFG
Subjt:  TSELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG

Q68FY1 Nucleoporin NUP352.1e-1527.19Show/hide
Query:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSSASTSYTPISGQQ
        DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D   SP + S P           P + +++ S   +P+    
Subjt:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSSASTSYTPISGQQ

Query:  IRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR
                       GV+T    +   SP   + QP    T   P ++     Q + L +    ++ WVTV+GF  A  + +L +F + G ILKHV    
Subjt:  IRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR

Query:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPVSS--------RTSELLATRGLARPYNLQNGNSNARQSG
          NWMHI YQ++  A KAL+K+G      +++GVKP +D    +  D   L++P     PP+ +         T  +   R LA  Y     +       
Subjt:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPVSS--------RTSELLATRGLARPYNLQNGNSNARQSG

Query:  GTIASPSKSLVSKVMDLMFG
         T     +SLVS+ M+ MFG
Subjt:  GTIASPSKSLVSKVMDLMFG

Q6P6X9 Nucleoporin NUP351.5e-1628.83Show/hide
Query:  TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM-K
        +P  G Q L      DL +PVT +   F   G A   S L          P P V T +D+SG              +P ++S       S    SP+  
Subjt:  TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM-K

Query:  NKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
         K   +  +TP+SG Q   G+   N++S        Q+ K   SP +  + P                 Q + L +    ++ W+TV+GF PA  + +L 
Subjt:  NKSSASTSYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDEKLNNPGFMVIPPVS---SRTSELLATRGLARPYN-L
        +F + G ILKHV      NWMH+ YQ++  A KAL+K+G      +++GVKP +D    ++LD K +    +  PPV    + +  L   R + RP +  
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDEKLNNPGFMVIPPVS---SRTSELLATRGLARPYN-L

Query:  QNGNSNARQSGGTIASPSK--SLVSKVMDLMFG
           +S+  Q      +P K  S VSK M+ MFG
Subjt:  QNGNSNARQSGGTIASPSK--SLVSKVMDLMFG

Q8NFH5 Nucleoporin NUP358.0e-1528.06Show/hide
Query:  LASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIK--SDPRTPIQSHDFSSPMKNKSSASTSYTPISGQ
        L SP + + G          V+A +   F   DLP P   T + RS S   P  G+ +   SP +   S P+  + +H      K+KS A     P+   
Subjt:  LASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIK--SDPRTPIQSHDFSSPMKNKSSASTSYTPISGQ

Query:  QIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQ-PGALITLPIPREVARPE-------------VQRNCLPAGKLNEEEWVTVYGFSPADTNLVLRE
             S G    ST      +       SP+ GV   PG   ++  P  + +P               Q + L +    ++ WVTV+GF  A  + +L +
Subjt:  QIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQ-PGALITLPIPREVARPE-------------VQRNCLPAGKLNEEEWVTVYGFSPADTNLVLRE

Query:  FEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPVSS--------RTSELLATRGLAR
        F + G ILKHV      NWMHI YQ++  A KAL+K+G      +++GVKP +D    ++ D   L++P     PP+ +         T  +   R LA 
Subjt:  FEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPVSS--------RTSELLATRGLAR

Query:  PYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG
         Y     +        T     +SLVSK M+ MFG
Subjt:  PYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG

Arabidopsis top hitse value%identityAlignment
AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein1.8e-12668.86Show/hide
Query:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDF
        M++  HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI DY  SP+ KSD RTP QS   + 
Subjt:  MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDF

Query:  SSPMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPAD
         +P K K  AS S++ ++ QQ +Q S   +WWS SK G STEQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P G L+EEEWVTVYGFSP D
Subjt:  SSPMKNKSSASTSYTPISGQQIRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPAD

Query:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN
        TNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVKPVDP+ +Q L+E+LNN GFM +PP SS  +     R L+RP  
Subjt:  TNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN

Query:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV
        LQNG++ + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACTGTGCATAGAACTCCAAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGCGGAAAGGGAAGTTCTCAACTCCAGGCCA
GGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAAT
CTGGAATTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAAGTGCCAGCACT
TCGTACACACCAATCAGTGGACAACAAATCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTC
ACCGGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAATCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTGCAGGAAAACTCAATG
AGGAGGAATGGGTGACTGTCTATGGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGAT
GCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCACACAAGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTGATTGTTGGTGTGAAACCAGTGGA
CCCAATGCACCGGCAGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCGGTATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCAC
GTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTC
TAG
mRNA sequenceShow/hide mRNA sequence
ACTGAACGACGTTGGAGTTTAGGGTTTCAAATTCCAAAATATTTAGGTCTTTTCGTCCCATTTGGGCGTCTCTATTCTAAAATACTTTCGGGAGGGAAAATCCCGAACGG
AAAATCAAATTCCAGAGGCTCCTCGCATTTCAATTTCTCCAATCCAAATCGATCAGTTCGAAGCAGAGCTCGAGCACTTTCTGAAGTTGATATATTTCTCTTCTAAGTCA
TGAACTCCACTGTGCATAGAACTCCAAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGCGGAAAGGGAAGTTCTCAACTCCAGGCCAG
GCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAATC
TGGAATTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAAGTGCCAGCACTT
CGTACACACCAATCAGTGGACAACAAATCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTCA
CCGGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAATCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTGCAGGAAAACTCAATGA
GGAGGAATGGGTGACTGTCTATGGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATG
CTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCACACAAGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTGATTGTTGGTGTGAAACCAGTGGAC
CCAATGCACCGGCAGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCGGTATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCACG
TCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCT
AGGTTAGCTCCTCTTGGCATATCGATTTCCTGTGGTAAGAAATTCTTGAAAATTTGAGAGCTCACACATTGATTTGGCGTGACATGTTAGATTGTTGTAACTGTGTACAA
TGTTCACAGTCCTCCATCTTGATACTTGATTGTTTTTCCTGATTCTTACTCTTACAAAATGAGACAAGGAAATGAAGATGATGCTGAAACTTTTTAGGCCCTTGATAACA
AACAAATATGAGAACCAAGTATATAGCATATCCCCACCCTTTTGTTGGAGTTGCCTCTTGGGAAATGACGATAGGTTGAAATTCCTATCCTCTGTTTCATTCTTTGTTTT
TGGGAAATTGGAGTTTGGTTTCAGGAATTGGTTGCTTGTAGTTCCTTTTTCCTATTTA
Protein sequenceShow/hide protein sequence
MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSSAST
SYTPISGQQIRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPIPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRD
ANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFGV