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Lcy05g002220 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g002220
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDynein light chain
Genome locationChr05:2020166..2022500
RNA-Seq ExpressionLcy05g002220
SyntenyLcy05g002220
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462164.1 PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo]1.9e-4698.95Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA

XP_011659570.1 dynein light chain LC6, flagellar outer arm [Cucumis sativus]7.0e-4698.94Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_022964212.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]1.9e-4395.74Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_023513963.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]1.9e-4395.74Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_038897874.1 dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]1.1e-4698.95Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
        MLEGKAL+QDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA

TrEMBL top hitse value%identityAlignment
A0A0A0K947 Dynein light chain3.4e-4698.94Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

A0A1S3CGU5 Dynein light chain9.0e-4798.95Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA

A0A5A7UW48 Dynein light chain9.0e-4798.95Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
        MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA

A0A6J1HH84 Dynein light chain9.3e-4495.74Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

A0A6J1KDK4 Dynein light chain9.3e-4495.74Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.8e-1546.07Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M E KA++++ DMP  MQ  A+D A++AL+ +++   K IAA+IKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P61285 Dynein light chain 1, cytoplasmic5.1e-1543.82Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P63167 Dynein light chain 1, cytoplasmic5.1e-1543.82Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q22799 Dynein light chain 1, cytoplasmic3.0e-1544.94Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M++ KA++++ DM   MQ  A+D A++AL+ Y++   K IAA+IKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q24117 Dynein light chain 1, cytoplasmic5.1e-1544.94Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  A+D A++AL+ Y++   K IAA+IKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 111.2e-2279.66Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCV
        MLEGKA+V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD RYGSGWQCV
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 112.1e-4080.65Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS
        MLEGKA+V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD RYGSGWQCVVGSNFGCFFTHSKG+FIYF+LETL FLIFKG ++
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS

AT3G16120.1 Dynein light chain type 1 family protein7.5e-3879.35Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT
        MLEGKA V++TDMP KMQ+QAM  AS++LDL+DVFD  SIAAHIKK+FD RYGSGWQCVVG+NFGCFFTHSKG+FIYF L TLNFLIFKG T
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT

AT4G27360.1 Dynein light chain type 1 family protein4.0e-2355.56Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKA++ DTDM   M+  A+  ASKALD +DV +   IA  IKK+FD  YGSGWQC+VG++FG F TH  G FI+F + +L  L+FKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

AT5G20110.1 Dynein light chain type 1 family protein9.6e-1750Show/hide
Query:  DMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        DMPG MQ  A   A   LD  + F  K +A ++KK+FD  YG  W C+VGS+FG F THS G FIYF ++ L  L+FK
Subjt:  DMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTAAAGCTCTGGATCTCTATGATGTTTTCGACTG
CAAATCCATTGCTGCCCACATAAAAAAGGATTTTGACAACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGGT
CTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATATTCAAAGGGGTGACCTCTTCGGCCTAG
mRNA sequenceShow/hide mRNA sequence
GAGAAAGTAAGAGAGAGAAAGAAAAAAGAGATTTTTCATTAATAGAATATTGTTAAAAGTCCTTAAAGTAGGGAGAGAAAATGACAGAAAAATAATATTAATCGGAATAT
GTGCCAGCCTAAAACTTGAATTTCAAAAAGATTCCATCACATTTGGAAGAAAGGGGCTTCCAGAGTCTTTCCTTTGTATAAAATCATCATCCATTTGTTTCCTTCTTCTT
ATTTCTGTGTTTAATCAGACTCTTGGAAGCAGAAGAAACATTTGGGTTTGGGATTGGTATAATCTTTTCTGGGTTTTGAAGATAAGATTCAAAAGAGATCGCCGAGAGCA
AATCCCACTCAGTTCTCTCTTTTCTGCAAAGGGGAAAGGATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGC
TGCTTCTAAAGCTCTGGATCTCTATGATGTTTTCGACTGCAAATCCATTGCTGCCCACATAAAAAAGGATTTTGACAACAGATATGGAAGCGGATGGCAATGTGTGGTGG
GTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGGTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATATTCAAAGGGGTGACCTCTTCGGCCTAGTGA
TTTGAGTTATGTTTTCTCTTTATTTGAATCTCTAGAGAGTTTGAGAAGCAGGAAAAAAAAGAAAAAAAAAAGATCGAATTGAAGAAACGTAAGGGAGATGATAGTAAGTG
TCCAAATGACATTATGGGATTGTTTGGATGTTTATGTTCAAAAAGCTTTTGATGCTTTTGTGGGTATACTCTGTAAATATTGAAATCCTGGGGAGACACTTCTTAATCCT
TTTCAAATATTTTCGTTGCCCCCTTTTCTTCAATCTCTATTTTCTGCCAAGAAAAGCTAATTATTGGGTAATGAAAATCAATTACAGGCGACCTCCTCGTCATTGAAATG
GTCAGAAATTATCCAAGACTTGTCAATTGGAGTCATATTTACAAACTGAGATCCCTAACAAACCCTACACCTACTGATAAATAAAGGGCCAGCTTGAATGAGAAATGGAA
ATAGTTTTCTTCCACCAAAGAATGTTTGACAACAATCTTTCTGAGAAACAAGAGGGACTACAAAACAACAATAATAATAACATCCTAGCTCAAATGTTTCAATGACTACC
AGGAGATGTCTAATGTATAGCAAAATCAAATCACAGGAGTAATCAGAGGCTCATTCCTGAAATGTGCCTCCAAGTTTCTAATTACAAGGTCTGCCATTGCAGTGCTGGTC
TCAACGGTATCGGTTCCCACGTGAGGCAGAAGAACTACATTTTCAAGCTCAAGCAACTGTTCGGGTACATGGGGCTCGTTCTCAAATACATCTAGTCCTGCCCCTGCTAA
ACGACCTTCAAGTAGTGCCGAGACAAGCTCGGGTTCGTCGACATGAGCACCTCGTCCAACATTGATAAGAATGCCATTTGGCCCCAATGCATTGATTACTTCTCGATTGA
CAATGTGCTTAGTTTCTTCAGTCAGATTGCATGCCACAAACAGAATCTGGGAATTTGCAGCCAAGTCTTTGACGCTGGGAAAGTATTTGTAACCACTTTGAGGCTTTTCA
TTCCTAGCGCAATAACCGATGGGGCAACCAAATGCTTCAGCTCTTTTGGCAATGGCTGAACCAATCCTTCCCAACCCAACAATTCCAACTGATTTACCATTGAACTGAAA
GAGACAACTACTTAATCAATCAACCAAATCAAATAACATGAATTTGCGATAGTTCATAGTTAGGGAAAATTCTATGATCATGTCAACTTGATATACTTCTTCCAAGAGTT
CAGTGGGACAGCATTAGGAAAAAGAAAAACAAATGACGTCGGAAAGCTGTGAAGGGAAATCTTGGGGATTCAATAAAGATTGATTGAATGGAAATGACTACAACTCTTCA
ATTTCCACCAAAATATCTGGAATCTAACAGAAATTTTCGGCAATCTAATATTTCAAATTCAAGCCTTACAATTCGAAGGCTTCTCTCCTCTACAATCCAGCTTAATCGAA
ACAAGCAATATCATCGAGGAATCACTATAATCAAATTCAGGCAAGAGATAACGCAACATAAACCTAG
Protein sequenceShow/hide protein sequence
MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSA