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Lcy05g002820 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g002820
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description39S ribosomal protein L41-A, mitochondrial
Genome locationChr05:2585018..2587703
RNA-Seq ExpressionLcy05g002820
SyntenyLcy05g002820
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135839.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus]1.8e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

XP_008461075.1 PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo]6.7e-4192.47Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]9.3e-4396.77Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP EVKTSE SESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]5.1e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE KTSE  ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]9.3e-4396.77Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein8.5e-4293.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+KTS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like3.2e-4192.47Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+ TS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

A0A2C9U139 Uncharacterized protein5.5e-4192.39Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFKLKPYVSQCP EVKT+E SE+AK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial4.5e-4396.77Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP EVKTSE SESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like2.5e-4193.55Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE KTSE  ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial4.5e-0851.92Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6DJI4 39S ribosomal protein L41-A, mitochondrial1.6e-0844.59Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial2.7e-0844.59Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial6.5e-0751.85Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FKLKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial4.5e-0850Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L274.5e-3576.34Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV-KTSEGSESAK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDLT FKLKPYVSQCP++V KT+E +E++K
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV-KTSEGSESAK

AT5G39800.1 Mitochondrial ribosomal protein L271.9e-3879.78Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK
        GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCPI+V T+E +E++K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK

AT5G40080.1 Mitochondrial ribosomal protein L274.3e-3878.65Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK
        GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCP++V T+E +E++K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGACTGATTTTGGGACTCGGGAGAGCAATGCGGAGAAAGCGTACGTCTTCTCTGGACATCCTTTCGTCCAAAAGAGCTCCACGAGATTATTATAAGGGCAA
GAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTGGATACGTAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTT
ATGTATCTCAATGTCCGATAGAAGTCAAGACAAGTGAGGGCAGCGAATCAGCTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
AAAATTAATAGAGCGAAGGATAAAAGAAATTGACTTTTTTTTAGAAAAGAATTAACCGAATGAAATACAAAGACTAAAATGAAATGAAACTTATACAAGGATGAAAATGT
TTTTTTTTAGTACAACAACATTTGGGGATGAAAAAATTCAAACATCTAACCTCTTGGTCGAGGGTACATGTCATTTACAGCCGATCTATTCTCCTCCCGGCAGGATGAAA
ATGATATTTAAGCTTAAAAAAAAACCTTATTAGATAAAAAAAATGAAGCATGATAGTTGAGTAAATTGTAATTTAACCTAAAGAGTGGACTAAAAAACAAAAAGACCTAA
ATAGCGACTCAAAACTCAAAAGACCAATTTCCCGTCTTCTCCCTCCTTCCCTGTTCGATCAACGGCAACACTCAGCGAAGACTCACGGACCCGTCTGATAGCCCCCAGCC
GAAGAGATTTCAGGGTTCTGGTATTCTTCTTTTTGTCTTCGAATTCTTGAGATTGGGGCGGGAGAAATGGCGTTGGGACTGATTTTGGGACTCGGGAGAGCAATGCGGAG
AAAGCGTACGTCTTCTCTGGACATCCTTTCGTCCAAAAGAGCTCCACGAGATTATTATAAGGGCAAGAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTGGATACG
TAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCGATAGAAGTCAAGACAAGTGAGGGCAGC
GAATCAGCTAAATCATAAGCGAAGAGGCTTGTGGTCTTTTCATTCTATAGCAATTGGCTTCATGTCGATTTTAGGCGATTTGGTCGGAATCAAGGGGGTAAAATGAGAGG
TTTCGTACACTTGTAGTGATTCAGTGAAATGATGTATAAACCCCCTGTCCTATATGAATAGAAGAAGCCTTCAATTTTTGCTTCGTTTCTTTTATTCTTCTAAAATACAT
TGATGTTTTATTTTATTGAGTTAAAAGGAACTGTGAGGGTTAGATTTGAATTTTACTCGCTCAAATCCATAATGTGTTATCTTTTTTTTTTTTTCTTTTTTTTAGTTCAA
TAACATTTAGAGGTGGAGGAATTCAAACCTCTAATCTTTTGGTTGGGG
Protein sequenceShow/hide protein sequence
MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS